RNA–Protein interactions for RNA: ENST00000567943.1

FANCA-228, Transcript of FA complementation group A, humanhuman

TSL 3

Gene FANCA, Length 860 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FANCA-228ENST00000567943 CST5P28325 142 aaPredicted RBP29.32■■■□□ 2.28
FANCA-228ENST00000567943 GRM4Q14833 912 aa29.32■■■□□ 2.28
FANCA-228ENST00000567943 TRIM60Q495X7 471 aa29.32■■■□□ 2.28
FANCA-228ENST00000567943 MTMR8Q96EF0 704 aa29.32■■■□□ 2.28
FANCA-228ENST00000567943 GNEQ9Y223 722 aaKnown RBP29.32■■■□□ 2.28
FANCA-228ENST00000567943 ATP11BQ9Y2G3 1177 aa29.32■■■□□ 2.28
FANCA-228ENST00000567943 PRC1O43663 620 aa29.31■■■□□ 2.28
FANCA-228ENST00000567943 MCM5P33992 734 aa29.31■■■□□ 2.28
FANCA-228ENST00000567943 BMP8BP34820 402 aa29.31■■■□□ 2.28
FANCA-228ENST00000567943 ACLYP53396 1101 aa29.31■■■□□ 2.28
FANCA-228ENST00000567943 NKX3-2P78367 333 aa29.31■■■□□ 2.28
FANCA-228ENST00000567943 TNFAIP2Q03169 654 aa29.31■■■□□ 2.28
FANCA-228ENST00000567943 KCNA10Q16322 511 aa29.31■■■□□ 2.28
FANCA-228ENST00000567943 RGS22Q8NE09 1264 aa29.31■■■□□ 2.28
FANCA-228ENST00000567943 ADD3Q9UEY8 706 aaKnown RBP29.31■■■□□ 2.28
FANCA-228ENST00000567943 DHX16O60231 1041 aaKnown RBP29.3■■■□□ 2.28
FANCA-228ENST00000567943 PPP1R11O60927 126 aaPredicted RBP29.3■■■□□ 2.28
FANCA-228ENST00000567943 C6orf222P0C671 652 aaPredicted RBP29.3■■■□□ 2.28
FANCA-228ENST00000567943 SMPD1P17405 629 aa29.3■■■□□ 2.28
FANCA-228ENST00000567943 ABCB11O95342 1321 aa29.29■■■□□ 2.28
FANCA-228ENST00000567943 LY9Q9HBG7 655 aa29.29■■■□□ 2.28
FANCA-228ENST00000567943 COL20A1Q9P218 1284 aa29.29■■■□□ 2.28
FANCA-228ENST00000567943 LOC102724159A0A0B4J2E5 919 aa29.28■■■□□ 2.28
FANCA-228ENST00000567943 CYTH3O43739 400 aa29.28■■■□□ 2.28
FANCA-228ENST00000567943 EDNRBP24530 442 aa29.28■■■□□ 2.28
FANCA-228ENST00000567943 PWP2Q15269 919 aaKnown RBP29.28■■■□□ 2.28
FANCA-228ENST00000567943 CATIPQ7Z7H3 387 aa29.28■■■□□ 2.28
FANCA-228ENST00000567943 FBXO11Q86XK2 927 aa29.28■■■□□ 2.28
FANCA-228ENST00000567943 VTA1Q9NP79 307 aa29.28■■■□□ 2.28
FANCA-228ENST00000567943 MOXD2PA6NHM9 499 aa29.27■■■□□ 2.28
FANCA-228ENST00000567943 OPLAHO14841 1288 aa29.27■■■□□ 2.28
FANCA-228ENST00000567943 MDM2Q00987 491 aaPredicted RBP29.27■■■□□ 2.28
FANCA-228ENST00000567943 TLE2Q04725 743 aa29.27■■■□□ 2.28
FANCA-228ENST00000567943 MTA3Q9BTC8 594 aa29.27■■■□□ 2.28
FANCA-228ENST00000567943 RIOX1Q9H6W3 641 aa29.27■■■□□ 2.28
FANCA-228ENST00000567943 A0A1W2PPC1 479 aa29.26■■■□□ 2.27
FANCA-228ENST00000567943 ASGR1P07306 291 aa29.26■■■□□ 2.27
FANCA-228ENST00000567943 BEX3Q00994 111 aa29.26■■■□□ 2.27
FANCA-228ENST00000567943 GNASQ5JWF2 1037 aa29.26■■■□□ 2.27
FANCA-228ENST00000567943 IQSEC1Q6DN90 963 aa29.26■■■□□ 2.27
FANCA-228ENST00000567943 SH3RF1Q7Z6J0 888 aa29.26■■■□□ 2.27
FANCA-228ENST00000567943 RASEFQ8IZ41 740 aa29.26■■■□□ 2.27
FANCA-228ENST00000567943 DNERQ8NFT8 737 aa29.26■■■□□ 2.27
FANCA-228ENST00000567943 SYTL5Q8TDW5 730 aaPredicted RBP29.26■■■□□ 2.27
FANCA-228ENST00000567943 TMEM87BQ96K49 555 aa29.26■■■□□ 2.27
FANCA-228ENST00000567943 PDLIM7Q9NR12 457 aa29.26■■■□□ 2.27
FANCA-228ENST00000567943 SH2B2O14492 632 aaPredicted RBP29.25■■■□□ 2.27
FANCA-228ENST00000567943 TLK2Q86UE8 772 aa29.25■■■□□ 2.27
FANCA-228ENST00000567943 NEK1Q96PY6 1258 aa29.25■■■□□ 2.27
FANCA-228ENST00000567943 RBM47A0AV96 593 aaKnown RBP29.24■■■□□ 2.27
FANCA-228ENST00000567943 ZBTB5O15062 677 aa29.24■■■□□ 2.27
FANCA-228ENST00000567943 NFXL1Q6ZNB6 911 aa29.24■■■□□ 2.27
FANCA-228ENST00000567943 NOL8Q76FK4 1167 aaKnown RBP29.24■■■□□ 2.27
FANCA-228ENST00000567943 ZNF654Q8IZM8 581 aa29.24■■■□□ 2.27
FANCA-228ENST00000567943 NUP133Q8WUM0 1156 aa29.24■■■□□ 2.27
FANCA-228ENST00000567943 TAAR1Q96RJ0 339 aa29.24■■■□□ 2.27
FANCA-228ENST00000567943 PIGSQ96S52 555 aa29.24■■■□□ 2.27
FANCA-228ENST00000567943 MYL10Q9BUA6 226 aa29.24■■■□□ 2.27
FANCA-228ENST00000567943 AMNQ9BXJ7 453 aa29.24■■■□□ 2.27
FANCA-228ENST00000567943 LRRC2Q9BYS8 371 aa29.24■■■□□ 2.27
FANCA-228ENST00000567943 MAF1Q9H063 256 aa29.24■■■□□ 2.27
FANCA-228ENST00000567943 SPC25Q9HBM1 224 aa29.24■■■□□ 2.27
FANCA-228ENST00000567943 STARD7Q9NQZ5 370 aa29.24■■■□□ 2.27
FANCA-228ENST00000567943 MRPL11Q9Y3B7 192 aaKnown RBP29.24■■■□□ 2.27
FANCA-228ENST00000567943 TRIM43BA6NCK2 446 aa29.23■■■□□ 2.27
FANCA-228ENST00000567943 TSGA10IPQ3SY00 556 aa29.23■■■□□ 2.27
FANCA-228ENST00000567943 PCSK9Q8NBP7 692 aaKnown RBP29.23■■■□□ 2.27
FANCA-228ENST00000567943 TRIM43Q96BQ3 446 aaPredicted RBP29.23■■■□□ 2.27
FANCA-228ENST00000567943 CCDC69A6NI79 296 aa29.22■■■□□ 2.27
FANCA-228ENST00000567943 DYNC1LI2O43237 492 aaPredicted RBP29.22■■■□□ 2.27
FANCA-228ENST00000567943 REC8O95072 547 aa29.22■■■□□ 2.27
FANCA-228ENST00000567943 ADCK5Q3MIX3 580 aa29.22■■■□□ 2.27
FANCA-228ENST00000567943 DUSP28Q4G0W2 176 aa29.22■■■□□ 2.27
FANCA-228ENST00000567943 TMTC2Q8N394 836 aa29.22■■■□□ 2.27
FANCA-228ENST00000567943 KIAA1217Q5T5P2 1943 aa29.22■■■□□ 2.27
FANCA-228ENST00000567943 ELP1O95163 1332 aa29.21■■■□□ 2.27
FANCA-228ENST00000567943 SOX1O00570 391 aaPredicted RBP29.21■■■□□ 2.27
FANCA-228ENST00000567943 DDAH1O94760 285 aa29.21■■■□□ 2.27
FANCA-228ENST00000567943 ITGB8P26012 769 aa29.21■■■□□ 2.27
FANCA-228ENST00000567943 CDK7P50613 346 aa29.21■■■□□ 2.27
FANCA-228ENST00000567943 GHRHRQ02643 423 aa29.21■■■□□ 2.27
FANCA-228ENST00000567943 PDE4DQ08499 809 aa29.21■■■□□ 2.27
FANCA-228ENST00000567943 KRT32Q14532 448 aa29.21■■■□□ 2.27
FANCA-228ENST00000567943 FSCN1Q16658 493 aaKnown RBP29.21■■■□□ 2.27
FANCA-228ENST00000567943 ANKRD33Q7Z3H0 272 aa29.21■■■□□ 2.27
FANCA-228ENST00000567943 HOMER1Q86YM7 354 aa29.21■■■□□ 2.27
FANCA-228ENST00000567943 MCF2L2Q86YR7 1114 aa29.21■■■□□ 2.27
FANCA-228ENST00000567943 WDR11Q9BZH6 1224 aa29.21■■■□□ 2.27
FANCA-228ENST00000567943 UBE2OQ9C0C9 1292 aaKnown RBP29.21■■■□□ 2.27
FANCA-228ENST00000567943 PRDM5Q9NQX1 630 aaPredicted RBP29.21■■■□□ 2.27
FANCA-228ENST00000567943 Q9Y3F1 56 aa29.21■■■□□ 2.27
FANCA-228ENST00000567943 PQBP1O60828 265 aaKnown RBP29.2■■■□□ 2.26
FANCA-228ENST00000567943 LIFRP42702 1097 aa29.2■■■□□ 2.26
FANCA-228ENST00000567943 GLT1D1Q96MS3 346 aa29.2■■■□□ 2.26
FANCA-228ENST00000567943 MAP3K14Q99558 947 aa29.2■■■□□ 2.26
FANCA-228ENST00000567943 PCDHA1Q9Y5I3 950 aa29.2■■■□□ 2.26
FANCA-228ENST00000567943 HSPA4P34932 840 aa29.19■■■□□ 2.26
FANCA-228ENST00000567943 HSD17B4P51659 736 aa29.19■■■□□ 2.26
FANCA-228ENST00000567943 FAAP100Q0VG06 881 aa29.19■■■□□ 2.26
FANCA-228ENST00000567943 CTCFLQ8NI51 663 aaPredicted RBP29.19■■■□□ 2.26
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms