RNA–Protein interactions for RNA: ENST00000567674.1

CDH3-206, Transcript of cadherin 3, humanhuman

TSL 3

Gene CDH3, Length 892 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-206ENST00000567674 BRDTQ58F21 947 aaPredicted RBP13.04□□□□□ -0.32
CDH3-206ENST00000567674 TAPT1Q6NXT6 567 aa13.04□□□□□ -0.32
CDH3-206ENST00000567674 NSMFQ6X4W1 530 aa13.04□□□□□ -0.32
CDH3-206ENST00000567674 LZTS2Q9BRK4 669 aa13.04□□□□□ -0.32
CDH3-206ENST00000567674 ZKSCAN3Q9BRR0 538 aa13.04□□□□□ -0.32
CDH3-206ENST00000567674 AMNQ9BXJ7 453 aa13.04□□□□□ -0.32
CDH3-206ENST00000567674 AP5M1Q9H0R1 490 aa13.04□□□□□ -0.32
CDH3-206ENST00000567674 IL25Q9H293 177 aa13.04□□□□□ -0.32
CDH3-206ENST00000567674 STARD7Q9NQZ5 370 aa13.04□□□□□ -0.32
CDH3-206ENST00000567674 FRMPD2Q68DX3 1309 aaPredicted RBP13.04□□□□□ -0.32
CDH3-206ENST00000567674 ALPK3Q96L96 1907 aa13.03□□□□□ -0.32
CDH3-206ENST00000567674 SMCHD1A6NHR9 2005 aa13.03□□□□□ -0.32
CDH3-206ENST00000567674 KLRF2D3W0D1 207 aa13.03□□□□□ -0.32
CDH3-206ENST00000567674 IFIT3O14879 490 aaKnown RBP13.03□□□□□ -0.32
CDH3-206ENST00000567674 ZBTB5O15062 677 aa13.03□□□□□ -0.32
CDH3-206ENST00000567674 KIAA0355O15063 1070 aa13.03□□□□□ -0.32
CDH3-206ENST00000567674 CALM1P0DP23 149 aa13.03□□□□□ -0.32
CDH3-206ENST00000567674 CALM2P0DP24 149 aa13.03□□□□□ -0.32
CDH3-206ENST00000567674 CALM3P0DP25 149 aa13.03□□□□□ -0.32
CDH3-206ENST00000567674 MCM5P33992 734 aa13.03□□□□□ -0.32
CDH3-206ENST00000567674 LIFRP42702 1097 aa13.03□□□□□ -0.32
CDH3-206ENST00000567674 GNAQP50148 359 aa13.03□□□□□ -0.32
CDH3-206ENST00000567674 RPS6P62753 249 aaKnown RBP13.03□□□□□ -0.32
CDH3-206ENST00000567674 PTH1RQ03431 593 aa13.03□□□□□ -0.32
CDH3-206ENST00000567674 TROAPQ12815 778 aa13.03□□□□□ -0.32
CDH3-206ENST00000567674 WTAPQ15007 396 aa13.03□□□□□ -0.32
CDH3-206ENST00000567674 CDC37Q16543 378 aaPredicted RBP13.03□□□□□ -0.32
CDH3-206ENST00000567674 TSGA10IPQ3SY00 556 aa13.03□□□□□ -0.32
CDH3-206ENST00000567674 GNASQ5JWF2 1037 aa13.03□□□□□ -0.32
CDH3-206ENST00000567674 ERICH6BQ5W0A0 696 aa13.03□□□□□ -0.32
CDH3-206ENST00000567674 CATIPQ7Z7H3 387 aa13.03□□□□□ -0.32
CDH3-206ENST00000567674 FBXO11Q86XK2 927 aa13.03□□□□□ -0.32
CDH3-206ENST00000567674 SLC43A3Q8NBI5 491 aa13.03□□□□□ -0.32
CDH3-206ENST00000567674 NSUN6Q8TEA1 469 aaKnown RBP13.03□□□□□ -0.32
CDH3-206ENST00000567674 RIOX1Q9H6W3 641 aa13.03□□□□□ -0.32
CDH3-206ENST00000567674 A0A0U1RQG5 324 aaPredicted RBP13.02□□□□□ -0.33
CDH3-206ENST00000567674 PTPDC1A2A3K4 754 aa13.02□□□□□ -0.33
CDH3-206ENST00000567674 ARVCFO00192 962 aa13.02□□□□□ -0.33
CDH3-206ENST00000567674 NFIBO00712 420 aa13.02□□□□□ -0.33
CDH3-206ENST00000567674 ASGR1P07306 291 aa13.02□□□□□ -0.33
CDH3-206ENST00000567674 CLTBP09497 229 aa13.02□□□□□ -0.33
CDH3-206ENST00000567674 C6orf222P0C671 652 aaPredicted RBP13.02□□□□□ -0.33
CDH3-206ENST00000567674 KIF5BP33176 963 aa13.02□□□□□ -0.33
CDH3-206ENST00000567674 CPT1AP50416 773 aa13.02□□□□□ -0.33
CDH3-206ENST00000567674 ATN1P54259 1190 aaPredicted RBP13.02□□□□□ -0.33
CDH3-206ENST00000567674 NECTIN1Q15223 517 aa13.02□□□□□ -0.33
CDH3-206ENST00000567674 ANO1Q5XXA6 986 aa13.02□□□□□ -0.33
CDH3-206ENST00000567674 KCNV1Q6PIU1 500 aa13.02□□□□□ -0.33
CDH3-206ENST00000567674 MAFAQ8NHW3 353 aaPredicted RBP13.02□□□□□ -0.33
CDH3-206ENST00000567674 IGDCC4Q8TDY8 1250 aa13.02□□□□□ -0.33
CDH3-206ENST00000567674 SCFD2Q8WU76 684 aa13.02□□□□□ -0.33
CDH3-206ENST00000567674 ESYT1Q9BSJ8 1104 aa13.02□□□□□ -0.33
CDH3-206ENST00000567674 JMJD4Q9H9V9 463 aa13.02□□□□□ -0.33
CDH3-206ENST00000567674 POLR3EQ9NVU0 708 aa13.02□□□□□ -0.33
CDH3-206ENST00000567674 MAD2L2Q9UI95 211 aa13.02□□□□□ -0.33
CDH3-206ENST00000567674 MTMR7Q9Y216 660 aa13.02□□□□□ -0.33
CDH3-206ENST00000567674 ATP11BQ9Y2G3 1177 aa13.02□□□□□ -0.33
CDH3-206ENST00000567674 RBM8AQ9Y5S9 174 aaKnown RBP13.02□□□□□ -0.33
CDH3-206ENST00000567674 ASTN1O14525 1302 aa13.02□□□□□ -0.33
CDH3-206ENST00000567674 MUC3AQ02505 3323 aa13.02□□□□□ -0.33
CDH3-206ENST00000567674 TLR3O15455 904 aaKnown RBP13.01□□□□□ -0.33
CDH3-206ENST00000567674 DDAH1O94760 285 aa13.01□□□□□ -0.33
CDH3-206ENST00000567674 HMGB1P09429 215 aaKnown RBP13.01□□□□□ -0.33
CDH3-206ENST00000567674 HSD17B4P51659 736 aa13.01□□□□□ -0.33
CDH3-206ENST00000567674 IRX6P78412 446 aaPredicted RBP13.01□□□□□ -0.33
CDH3-206ENST00000567674 TLE2Q04725 743 aa13.01□□□□□ -0.33
CDH3-206ENST00000567674 PDE4DQ08499 809 aa13.01□□□□□ -0.33
CDH3-206ENST00000567674 KRT32Q14532 448 aa13.01□□□□□ -0.33
CDH3-206ENST00000567674 GRM4Q14833 912 aa13.01□□□□□ -0.33
CDH3-206ENST00000567674 FSCN1Q16658 493 aaKnown RBP13.01□□□□□ -0.33
CDH3-206ENST00000567674 TRIM60Q495X7 471 aa13.01□□□□□ -0.33
CDH3-206ENST00000567674 ZNF697Q5TEC3 545 aa13.01□□□□□ -0.33
CDH3-206ENST00000567674 CYB5R4Q7L1T6 521 aa13.01□□□□□ -0.33
CDH3-206ENST00000567674 TLK2Q86UE8 772 aa13.01□□□□□ -0.33
CDH3-206ENST00000567674 MB21D2Q8IYB1 491 aaPredicted RBP13.01□□□□□ -0.33
CDH3-206ENST00000567674 FAM122AQ96E09 287 aa13.01□□□□□ -0.33
CDH3-206ENST00000567674 FAM161BQ96MY7 647 aa13.01□□□□□ -0.33
CDH3-206ENST00000567674 UBA5Q9GZZ9 404 aa13.01□□□□□ -0.33
CDH3-206ENST00000567674 LSG1Q9H089 658 aaKnown RBP13.01□□□□□ -0.33
CDH3-206ENST00000567674 PDLIM7Q9NR12 457 aa13.01□□□□□ -0.33
CDH3-206ENST00000567674 PNMA6FA0A0J9YX94 578 aa13□□□□□ -0.33
CDH3-206ENST00000567674 CTAGE5O15320 804 aa13□□□□□ -0.33
CDH3-206ENST00000567674 EIF3JO75822 258 aaKnown RBP13□□□□□ -0.33
CDH3-206ENST00000567674 STAM2O75886 525 aa13□□□□□ -0.33
CDH3-206ENST00000567674 SUPT20HL2P0C7V6 817 aa13□□□□□ -0.33
CDH3-206ENST00000567674 GOLGA8HP0CJ92 632 aa13□□□□□ -0.33
CDH3-206ENST00000567674 TGFB3P10600 412 aa13□□□□□ -0.33
CDH3-206ENST00000567674 SMPD1P17405 629 aa13□□□□□ -0.33
CDH3-206ENST00000567674 PTPN11Q06124 597 aaPredicted RBP13□□□□□ -0.33
CDH3-206ENST00000567674 TTLL4Q14679 1199 aa13□□□□□ -0.33
CDH3-206ENST00000567674 PPP2R5BQ15173 497 aa13□□□□□ -0.33
CDH3-206ENST00000567674 STXBP2Q15833 593 aa13□□□□□ -0.33
CDH3-206ENST00000567674 QRICH1Q2TAL8 776 aa13□□□□□ -0.33
CDH3-206ENST00000567674 STOX1Q6ZVD7 989 aa13□□□□□ -0.33
CDH3-206ENST00000567674 SPZ1Q9BXG8 430 aa13□□□□□ -0.33
CDH3-206ENST00000567674 WDR11Q9BZH6 1224 aa13□□□□□ -0.33
CDH3-206ENST00000567674 A6NJR5 290 aa12.99□□□□□ -0.33
CDH3-206ENST00000567674 TNFRSF10AO00220 468 aa12.99□□□□□ -0.33
CDH3-206ENST00000567674 TIMP1P01033 207 aa12.99□□□□□ -0.33
CDH3-206ENST00000567674 CALML3P27482 149 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms