RNA–Protein interactions for RNA: ENST00000567529.1

SCAMP5-212, Transcript of secretory carrier membrane protein 5, humanhuman

TSL 2

Gene SCAMP5, Length 966 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP5-212ENST00000567529 USP28Q96RU2 1077 aa13.17□□□□□ -0.3
SCAMP5-212ENST00000567529 PTPN18Q99952 460 aa13.17□□□□□ -0.3
SCAMP5-212ENST00000567529 SCAND2PQ9GZW5 306 aaPredicted RBP13.17□□□□□ -0.3
SCAMP5-212ENST00000567529 ZFYVE28Q9HCC9 887 aa13.17□□□□□ -0.3
SCAMP5-212ENST00000567529 LMBRD1Q9NUN5 540 aa13.17□□□□□ -0.3
SCAMP5-212ENST00000567529 CFAP45Q9UL16 551 aa13.17□□□□□ -0.3
SCAMP5-212ENST00000567529 PCDHA6Q9UN73 950 aa13.17□□□□□ -0.3
SCAMP5-212ENST00000567529 PCDHA8Q9Y5H6 950 aa13.17□□□□□ -0.3
SCAMP5-212ENST00000567529 PCDHA1Q9Y5I3 950 aa13.17□□□□□ -0.3
SCAMP5-212ENST00000567529 MYPNQ86TC9 1320 aa13.16□□□□□ -0.3
SCAMP5-212ENST00000567529 MYH7BA7E2Y1 1941 aa13.16□□□□□ -0.3
SCAMP5-212ENST00000567529 USP17L15C9J2P7 530 aa13.16□□□□□ -0.3
SCAMP5-212ENST00000567529 USP17L13C9JLJ4 530 aa13.16□□□□□ -0.3
SCAMP5-212ENST00000567529 USP17L11C9JVI0 530 aa13.16□□□□□ -0.3
SCAMP5-212ENST00000567529 USP17L18D6R9N7 530 aa13.16□□□□□ -0.3
SCAMP5-212ENST00000567529 USP17L22D6RA61 530 aa13.16□□□□□ -0.3
SCAMP5-212ENST00000567529 USP17L17D6RBQ6 530 aa13.16□□□□□ -0.3
SCAMP5-212ENST00000567529 USP17L19D6RCP7 530 aa13.16□□□□□ -0.3
SCAMP5-212ENST00000567529 USP17L20D6RJB6 530 aa13.16□□□□□ -0.3
SCAMP5-212ENST00000567529 GJB1P08034 283 aa13.16□□□□□ -0.3
SCAMP5-212ENST00000567529 PTMSP20962 102 aa13.16□□□□□ -0.3
SCAMP5-212ENST00000567529 DSG3P32926 999 aa13.16□□□□□ -0.3
SCAMP5-212ENST00000567529 BMP8BP34820 402 aa13.16□□□□□ -0.3
SCAMP5-212ENST00000567529 GJA5P36382 358 aa13.16□□□□□ -0.3
SCAMP5-212ENST00000567529 ADCY7P51828 1080 aa13.16□□□□□ -0.3
SCAMP5-212ENST00000567529 USP17L24Q0WX57 530 aa13.16□□□□□ -0.3
SCAMP5-212ENST00000567529 TAF1CQ15572 869 aaPredicted RBP13.16□□□□□ -0.3
SCAMP5-212ENST00000567529 RILPL1Q5EBL4 403 aa13.16□□□□□ -0.3
SCAMP5-212ENST00000567529 EARS2Q5JPH6 523 aaKnown RBP13.16□□□□□ -0.3
SCAMP5-212ENST00000567529 BICD2Q8TD16 824 aa13.16□□□□□ -0.3
SCAMP5-212ENST00000567529 SYMPKQ92797 1274 aaKnown RBP13.16□□□□□ -0.3
SCAMP5-212ENST00000567529 ARHGAP39Q9C0H5 1083 aa13.16□□□□□ -0.3
SCAMP5-212ENST00000567529 RNF208Q9H0X6 261 aa13.16□□□□□ -0.3
SCAMP5-212ENST00000567529 GLT8D2Q9H1C3 349 aa13.16□□□□□ -0.3
SCAMP5-212ENST00000567529 GDPD2Q9HCC8 539 aa13.16□□□□□ -0.3
SCAMP5-212ENST00000567529 RIC8AQ9NPQ8 531 aa13.16□□□□□ -0.3
SCAMP5-212ENST00000567529 RTEL1Q9NZ71 1219 aa13.16□□□□□ -0.3
SCAMP5-212ENST00000567529 RCOR1Q9UKL0 485 aa13.16□□□□□ -0.3
SCAMP5-212ENST00000567529 ADAMTS5Q9UNA0 930 aa13.16□□□□□ -0.3
SCAMP5-212ENST00000567529 A0A0G2JMZ2 1700 aa13.16□□□□□ -0.3
SCAMP5-212ENST00000567529 ZNF536O15090 1300 aa13.15□□□□□ -0.3
SCAMP5-212ENST00000567529 ELP1O95163 1332 aa13.15□□□□□ -0.3
SCAMP5-212ENST00000567529 TMEM265A0A087WTH1 108 aa13.15□□□□□ -0.3
SCAMP5-212ENST00000567529 FAM205CA6NFA0 338 aa13.15□□□□□ -0.3
SCAMP5-212ENST00000567529 FIBPO43427 364 aa13.15□□□□□ -0.3
SCAMP5-212ENST00000567529 PRPF40AO75400 957 aaKnown RBP13.15□□□□□ -0.3
SCAMP5-212ENST00000567529 ICAM1P05362 532 aa13.15□□□□□ -0.3
SCAMP5-212ENST00000567529 CCL5P13501 91 aa13.15□□□□□ -0.3
SCAMP5-212ENST00000567529 HOXD11P31277 338 aaPredicted RBP13.15□□□□□ -0.3
SCAMP5-212ENST00000567529 NASPP49321 788 aaPredicted RBP13.15□□□□□ -0.3
SCAMP5-212ENST00000567529 TOB1P50616 345 aaPredicted RBP13.15□□□□□ -0.3
SCAMP5-212ENST00000567529 MRPL12P52815 198 aaKnown RBP13.15□□□□□ -0.3
SCAMP5-212ENST00000567529 COG2Q14746 738 aa13.15□□□□□ -0.3
SCAMP5-212ENST00000567529 CSPP1Q1MSJ5 1256 aa13.15□□□□□ -0.3
SCAMP5-212ENST00000567529 ANO1Q5XXA6 986 aa13.15□□□□□ -0.3
SCAMP5-212ENST00000567529 CCDC174Q6PII3 467 aa13.15□□□□□ -0.3
SCAMP5-212ENST00000567529 LEO1Q8WVC0 666 aaPredicted RBP13.15□□□□□ -0.3
SCAMP5-212ENST00000567529 GDF15Q99988 308 aa13.15□□□□□ -0.3
SCAMP5-212ENST00000567529 SLC38A10Q9HBR0 1119 aa13.15□□□□□ -0.3
SCAMP5-212ENST00000567529 POLR3EQ9NVU0 708 aa13.15□□□□□ -0.3
SCAMP5-212ENST00000567529 BIN2Q9UBW5 565 aaPredicted RBP13.15□□□□□ -0.3
SCAMP5-212ENST00000567529 ABCB11O95342 1321 aa13.14□□□□□ -0.31
SCAMP5-212ENST00000567529 ZBED4O75132 1171 aa13.14□□□□□ -0.31
SCAMP5-212ENST00000567529 YEATS4O95619 227 aa13.14□□□□□ -0.31
SCAMP5-212ENST00000567529 HOXA7P31268 230 aaPredicted RBP13.14□□□□□ -0.31
SCAMP5-212ENST00000567529 CLK2P49760 499 aaKnown RBP13.14□□□□□ -0.31
SCAMP5-212ENST00000567529 MOGSQ13724 837 aa13.14□□□□□ -0.31
SCAMP5-212ENST00000567529 USH1GQ495M9 461 aa13.14□□□□□ -0.31
SCAMP5-212ENST00000567529 TREML2Q5T2D2 321 aa13.14□□□□□ -0.31
SCAMP5-212ENST00000567529 SAMD1Q6SPF0 538 aaPredicted RBP13.14□□□□□ -0.31
SCAMP5-212ENST00000567529 PIK3AP1Q6ZUJ8 805 aa13.14□□□□□ -0.31
SCAMP5-212ENST00000567529 FASTKD5Q7L8L6 764 aaKnown RBP13.14□□□□□ -0.31
SCAMP5-212ENST00000567529 KRT25Q7Z3Z0 450 aa13.14□□□□□ -0.31
SCAMP5-212ENST00000567529 TEX2Q8IWB9 1127 aa13.14□□□□□ -0.31
SCAMP5-212ENST00000567529 TDHQ8IZJ6 230 aa13.14□□□□□ -0.31
SCAMP5-212ENST00000567529 REXO1Q8N1G1 1221 aaKnown RBP13.14□□□□□ -0.31
SCAMP5-212ENST00000567529 REPS2Q8NFH8 660 aa13.14□□□□□ -0.31
SCAMP5-212ENST00000567529 RASGRP4Q8TDF6 673 aa13.14□□□□□ -0.31
SCAMP5-212ENST00000567529 CUL5Q93034 780 aa13.14□□□□□ -0.31
SCAMP5-212ENST00000567529 ATG4CQ96DT6 458 aa13.14□□□□□ -0.31
SCAMP5-212ENST00000567529 SPATA32Q96LK8 384 aa13.14□□□□□ -0.31
SCAMP5-212ENST00000567529 FAM161BQ96MY7 647 aa13.14□□□□□ -0.31
SCAMP5-212ENST00000567529 GUCD1Q96NT3 240 aa13.14□□□□□ -0.31
SCAMP5-212ENST00000567529 FTOQ9C0B1 505 aaKnown RBP eCLIP13.14□□□□□ -0.31
SCAMP5-212ENST00000567529 PSTPIP2Q9H939 334 aa13.14□□□□□ -0.31
SCAMP5-212ENST00000567529 PNMA2Q9UL42 364 aa13.14□□□□□ -0.31
SCAMP5-212ENST00000567529 ZMYND8Q9ULU4 1186 aaPredicted RBP13.14□□□□□ -0.31
SCAMP5-212ENST00000567529 NOL7Q9UMY1 257 aaKnown RBP13.14□□□□□ -0.31
SCAMP5-212ENST00000567529 CLIC4Q9Y696 253 aa13.14□□□□□ -0.31
SCAMP5-212ENST00000567529 TTC28Q96AY4 2481 aa13.13□□□□□ -0.31
SCAMP5-212ENST00000567529 CCDC194A0A1B0GVG4 234 aa13.13□□□□□ -0.31
SCAMP5-212ENST00000567529 VWA5AO00534 786 aa13.13□□□□□ -0.31
SCAMP5-212ENST00000567529 TRAPPC10P48553 1259 aa13.13□□□□□ -0.31
SCAMP5-212ENST00000567529 PRMT2P55345 433 aa13.13□□□□□ -0.31
SCAMP5-212ENST00000567529 CEBPZQ03701 1054 aaKnown RBP13.13□□□□□ -0.31
SCAMP5-212ENST00000567529 SNAPC2Q13487 334 aa13.13□□□□□ -0.31
SCAMP5-212ENST00000567529 PTPAQ15257 358 aa13.13□□□□□ -0.31
SCAMP5-212ENST00000567529 SF3A1Q15459 793 aaKnown RBP13.13□□□□□ -0.31
SCAMP5-212ENST00000567529 GADL1Q6ZQY3 521 aa13.13□□□□□ -0.31
SCAMP5-212ENST00000567529 LINC00301Q8NCQ3 95 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms