RNA–Protein interactions for RNA: ENST00000567234.1

LINC00543-201, long intergenic non-protein coding RNA 543, humanhuman

BASIC

Gene LINC00543, Length 1,845 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00543-201ENST00000567234 PPP4R3AQ6IN85 833 aa26.21■■□□□ 1.79
LINC00543-201ENST00000567234 KRT222Q8N1A0 295 aa26.21■■□□□ 1.79
LINC00543-201ENST00000567234 ZNF397Q8NF99 534 aaPredicted RBP26.21■■□□□ 1.79
LINC00543-201ENST00000567234 CACTINQ8WUQ7 758 aaKnown RBP26.21■■□□□ 1.79
LINC00543-201ENST00000567234 ZBED3Q96IU2 234 aaPredicted RBP26.21■■□□□ 1.79
LINC00543-201ENST00000567234 MTMR9Q96QG7 549 aa26.21■■□□□ 1.79
LINC00543-201ENST00000567234 NAP1L4Q99733 375 aaKnown RBP26.21■■□□□ 1.79
LINC00543-201ENST00000567234 PSTPIP2Q9H939 334 aa26.21■■□□□ 1.79
LINC00543-201ENST00000567234 FZD9O00144 591 aa26.2■■□□□ 1.78
LINC00543-201ENST00000567234 NDUFB10O96000 172 aa26.2■■□□□ 1.78
LINC00543-201ENST00000567234 ATP1A3P13637 1013 aa26.2■■□□□ 1.78
LINC00543-201ENST00000567234 ZNF18P17022 549 aa26.2■■□□□ 1.78
LINC00543-201ENST00000567234 FMR1Q06787 632 aaKnown RBP eCLIP26.2■■□□□ 1.78
LINC00543-201ENST00000567234 MCTP2Q6DN12 878 aa26.2■■□□□ 1.78
LINC00543-201ENST00000567234 BTNL9Q6UXG8 535 aa26.2■■□□□ 1.78
LINC00543-201ENST00000567234 NFE2L3Q9Y4A8 694 aa26.2■■□□□ 1.78
LINC00543-201ENST00000567234 ZNF541Q9H0D2 1346 aa26.2■■□□□ 1.78
LINC00543-201ENST00000567234 SERPINC1P01008 464 aa26.19■■□□□ 1.78
LINC00543-201ENST00000567234 CDC25AP30304 524 aa26.19■■□□□ 1.78
LINC00543-201ENST00000567234 UBASH3AP57075 661 aa26.19■■□□□ 1.78
LINC00543-201ENST00000567234 CUL4BQ13620 913 aa26.19■■□□□ 1.78
LINC00543-201ENST00000567234 RRP1BQ14684 758 aaKnown RBP26.19■■□□□ 1.78
LINC00543-201ENST00000567234 CDC37Q16543 378 aaPredicted RBP26.19■■□□□ 1.78
LINC00543-201ENST00000567234 NAALADL2Q58DX5 795 aa26.19■■□□□ 1.78
LINC00543-201ENST00000567234 IGSF22Q8N9C0 903 aa26.19■■□□□ 1.78
LINC00543-201ENST00000567234 GCFC2P16383 781 aaKnown RBP26.18■■□□□ 1.78
LINC00543-201ENST00000567234 FXR2P51116 673 aaKnown RBP eCLIP26.18■■□□□ 1.78
LINC00543-201ENST00000567234 JAG1P78504 1218 aa26.18■■□□□ 1.78
LINC00543-201ENST00000567234 KIF18AQ8NI77 898 aa26.18■■□□□ 1.78
LINC00543-201ENST00000567234 ARHGEF10LQ9HCE6 1279 aa26.18■■□□□ 1.78
LINC00543-201ENST00000567234 RAD21O60216 631 aa26.18■■□□□ 1.78
LINC00543-201ENST00000567234 TNNT1P13805 278 aa26.18■■□□□ 1.78
LINC00543-201ENST00000567234 LMNB1P20700 586 aa26.18■■□□□ 1.78
LINC00543-201ENST00000567234 CALCRLQ16602 461 aa26.18■■□□□ 1.78
LINC00543-201ENST00000567234 CABP7Q86V35 215 aa26.18■■□□□ 1.78
LINC00543-201ENST00000567234 RASSF8Q8NHQ8 419 aa26.18■■□□□ 1.78
LINC00543-201ENST00000567234 KBTBD4Q9NVX7 518 aa26.18■■□□□ 1.78
LINC00543-201ENST00000567234 PCDHA1Q9Y5I3 950 aa26.18■■□□□ 1.78
LINC00543-201ENST00000567234 EDIL3O43854 480 aa26.17■■□□□ 1.78
LINC00543-201ENST00000567234 TUBB4AP04350 444 aa26.17■■□□□ 1.78
LINC00543-201ENST00000567234 BMP3P12645 472 aa26.17■■□□□ 1.78
LINC00543-201ENST00000567234 CASP1P29466 404 aa26.17■■□□□ 1.78
LINC00543-201ENST00000567234 LRMPQ12912 555 aa26.17■■□□□ 1.78
LINC00543-201ENST00000567234 SPATA1Q5VX52 437 aa26.17■■□□□ 1.78
LINC00543-201ENST00000567234 FILIP1Q7Z7B0 1213 aa26.17■■□□□ 1.78
LINC00543-201ENST00000567234 POTEDQ86YR6 584 aa26.17■■□□□ 1.78
LINC00543-201ENST00000567234 GJA3Q9Y6H8 435 aa26.17■■□□□ 1.78
LINC00543-201ENST00000567234 PP2D1A8MPX8 630 aa26.16■■□□□ 1.78
LINC00543-201ENST00000567234 PPP1R3GB7ZBB8 358 aa26.16■■□□□ 1.78
LINC00543-201ENST00000567234 TNNI2P48788 182 aa26.16■■□□□ 1.78
LINC00543-201ENST00000567234 PDIA5Q14554 519 aa26.16■■□□□ 1.78
LINC00543-201ENST00000567234 TNIP1Q15025 636 aa26.16■■□□□ 1.78
LINC00543-201ENST00000567234 SYDE2Q5VT97 1194 aa26.16■■□□□ 1.78
LINC00543-201ENST00000567234 TEX2Q8IWB9 1127 aa26.16■■□□□ 1.78
LINC00543-201ENST00000567234 CCDC150Q8NCX0 1101 aa26.16■■□□□ 1.78
LINC00543-201ENST00000567234 STAMQ92783 540 aa26.16■■□□□ 1.78
LINC00543-201ENST00000567234 MED15Q96RN5 788 aa26.16■■□□□ 1.78
LINC00543-201ENST00000567234 AMNQ9BXJ7 453 aa26.16■■□□□ 1.78
LINC00543-201ENST00000567234 RAB34Q9BZG1 259 aa26.16■■□□□ 1.78
LINC00543-201ENST00000567234 RPN1P04843 607 aaKnown RBP26.16■■□□□ 1.78
LINC00543-201ENST00000567234 KCNB1Q14721 858 aa26.16■■□□□ 1.78
LINC00543-201ENST00000567234 TMEM266Q2M3C6 531 aa26.16■■□□□ 1.78
LINC00543-201ENST00000567234 ZNF658Q5TYW1 1059 aaPredicted RBP26.16■■□□□ 1.78
LINC00543-201ENST00000567234 BLZF1Q9H2G9 400 aa26.16■■□□□ 1.78
LINC00543-201ENST00000567234 TMX2Q9Y320 296 aa26.16■■□□□ 1.78
LINC00543-201ENST00000567234 MAP3K10Q02779 954 aa26.15■■□□□ 1.78
LINC00543-201ENST00000567234 TERF2Q15554 542 aa26.15■■□□□ 1.78
LINC00543-201ENST00000567234 UBE2SQ16763 222 aa26.15■■□□□ 1.78
LINC00543-201ENST00000567234 TMC6Q7Z403 805 aa26.15■■□□□ 1.78
LINC00543-201ENST00000567234 VEZTQ9HBM0 779 aa26.15■■□□□ 1.78
LINC00543-201ENST00000567234 A0A0U1RQG5 324 aaPredicted RBP26.14■■□□□ 1.78
LINC00543-201ENST00000567234 A0A1W2PRG0 241 aa26.14■■□□□ 1.78
LINC00543-201ENST00000567234 CD44P16070 742 aaKnown RBP26.14■■□□□ 1.78
LINC00543-201ENST00000567234 TECP42680 631 aa26.14■■□□□ 1.78
LINC00543-201ENST00000567234 TRAF1Q13077 416 aa26.14■■□□□ 1.78
LINC00543-201ENST00000567234 AP3B2Q13367 1082 aa26.14■■□□□ 1.78
LINC00543-201ENST00000567234 TSPYL1Q9H0U9 437 aa26.14■■□□□ 1.78
LINC00543-201ENST00000567234 ZBTB21Q9ULJ3 1066 aa26.14■■□□□ 1.78
LINC00543-201ENST00000567234 SYNRGQ9UMZ2 1314 aa26.14■■□□□ 1.77
LINC00543-201ENST00000567234 TDP2O95551 362 aa26.14■■□□□ 1.77
LINC00543-201ENST00000567234 RPS12P25398 132 aaKnown RBP26.14■■□□□ 1.77
LINC00543-201ENST00000567234 GOPCQ9HD26 462 aa26.14■■□□□ 1.77
LINC00543-201ENST00000567234 TMEM232C9JQI7 657 aa26.13■■□□□ 1.77
LINC00543-201ENST00000567234 WNT10BO00744 389 aa26.13■■□□□ 1.77
LINC00543-201ENST00000567234 SLC37A4O43826 429 aa26.13■■□□□ 1.77
LINC00543-201ENST00000567234 CDK11BP21127 795 aaKnown RBP26.13■■□□□ 1.77
LINC00543-201ENST00000567234 GMPSP49915 693 aaPredicted RBP26.13■■□□□ 1.77
LINC00543-201ENST00000567234 USP11P51784 963 aa26.13■■□□□ 1.77
LINC00543-201ENST00000567234 FBXO11Q86XK2 927 aa26.13■■□□□ 1.77
LINC00543-201ENST00000567234 TRMT44Q8IYL2 757 aaKnown RBP26.13■■□□□ 1.77
LINC00543-201ENST00000567234 CALML4Q96GE6 196 aa26.13■■□□□ 1.77
LINC00543-201ENST00000567234 ERO1AQ96HE7 468 aa26.13■■□□□ 1.77
LINC00543-201ENST00000567234 CALCOCO1Q9P1Z2 691 aa26.13■■□□□ 1.77
LINC00543-201ENST00000567234 PGAP2Q9UHJ9 254 aa26.13■■□□□ 1.77
LINC00543-201ENST00000567234 EGFRP00533 1210 aa26.12■■□□□ 1.77
LINC00543-201ENST00000567234 PLCG1P19174 1290 aa26.12■■□□□ 1.77
LINC00543-201ENST00000567234 TXKP42681 527 aa26.12■■□□□ 1.77
LINC00543-201ENST00000567234 MOXD1Q6UVY6 613 aa26.12■■□□□ 1.77
LINC00543-201ENST00000567234 VSTM4Q8IW00 320 aa26.12■■□□□ 1.77
LINC00543-201ENST00000567234 DPF2Q92785 391 aa26.12■■□□□ 1.77
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms