RNA–Protein interactions for RNA: ENST00000566347.5

CLN6-207, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 1 (best) BASIC

Gene CLN6, Length 981 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-207ENST00000566347 KIAA1211Q6ZU35 1233 aa23.6■■□□□ 1.37
CLN6-207ENST00000566347 Q7L0L9 218 aa23.6■■□□□ 1.37
CLN6-207ENST00000566347 MAF1Q9H063 256 aa23.6■■□□□ 1.37
CLN6-207ENST00000566347 PDGFCQ9NRA1 345 aa23.6■■□□□ 1.37
CLN6-207ENST00000566347 DYNC1LI2O43237 492 aaPredicted RBP23.59■■□□□ 1.37
CLN6-207ENST00000566347 RPS6P62753 249 aaKnown RBP23.59■■□□□ 1.37
CLN6-207ENST00000566347 C9orf50Q5SZB4 431 aa23.59■■□□□ 1.37
CLN6-207ENST00000566347 FAM109BQ6ICB4 259 aaPredicted RBP23.59■■□□□ 1.37
CLN6-207ENST00000566347 RGS22Q8NE09 1264 aa23.59■■□□□ 1.37
CLN6-207ENST00000566347 UBA5Q9GZZ9 404 aa23.59■■□□□ 1.37
CLN6-207ENST00000566347 TBX21Q9UL17 535 aa23.59■■□□□ 1.37
CLN6-207ENST00000566347 B4DLN1 442 aa23.58■■□□□ 1.37
CLN6-207ENST00000566347 TLR3O15455 904 aaKnown RBP23.58■■□□□ 1.37
CLN6-207ENST00000566347 PARP1P09874 1014 aaKnown RBP23.58■■□□□ 1.37
CLN6-207ENST00000566347 MRPL12P52815 198 aaKnown RBP23.58■■□□□ 1.37
CLN6-207ENST00000566347 FPGSQ05932 587 aa23.58■■□□□ 1.37
CLN6-207ENST00000566347 CDC37Q16543 378 aaPredicted RBP23.58■■□□□ 1.37
CLN6-207ENST00000566347 USH1GQ495M9 461 aa23.58■■□□□ 1.37
CLN6-207ENST00000566347 DUSP28Q4G0W2 176 aa23.58■■□□□ 1.37
CLN6-207ENST00000566347 DNERQ8NFT8 737 aa23.58■■□□□ 1.37
CLN6-207ENST00000566347 SEZ6LQ9BYH1 1024 aa23.58■■□□□ 1.37
CLN6-207ENST00000566347 CPVLQ9H3G5 476 aa23.58■■□□□ 1.37
CLN6-207ENST00000566347 MTMR10Q9NXD2 777 aa23.58■■□□□ 1.37
CLN6-207ENST00000566347 TIMP1P01033 207 aa23.57■■□□□ 1.36
CLN6-207ENST00000566347 CHMLP26374 656 aa23.57■■□□□ 1.36
CLN6-207ENST00000566347 PDE4DQ08499 809 aa23.57■■□□□ 1.36
CLN6-207ENST00000566347 TRDNQ13061 729 aa23.57■■□□□ 1.36
CLN6-207ENST00000566347 IFIT1BQ5T764 474 aaKnown RBP23.57■■□□□ 1.36
CLN6-207ENST00000566347 CXCL17Q6UXB2 119 aa23.57■■□□□ 1.36
CLN6-207ENST00000566347 ADGRF4Q8IZF3 695 aa23.57■■□□□ 1.36
CLN6-207ENST00000566347 U3KPZ7 1027 aaPredicted RBP23.57■■□□□ 1.36
CLN6-207ENST00000566347 ABCB11O95342 1321 aa23.57■■□□□ 1.36
CLN6-207ENST00000566347 FAM126BQ8IXS8 530 aa23.56■■□□□ 1.36
CLN6-207ENST00000566347 WDR11Q9BZH6 1224 aa23.56■■□□□ 1.36
CLN6-207ENST00000566347 COL6A3P12111 3177 aa23.55■■□□□ 1.36
CLN6-207ENST00000566347 RBM47A0AV96 593 aaKnown RBP23.55■■□□□ 1.36
CLN6-207ENST00000566347 EDNRBP24530 442 aa23.55■■□□□ 1.36
CLN6-207ENST00000566347 SLC43A3Q8NBI5 491 aa23.55■■□□□ 1.36
CLN6-207ENST00000566347 DHX16O60231 1041 aaKnown RBP23.54■■□□□ 1.36
CLN6-207ENST00000566347 ITGA7Q13683 1181 aa23.54■■□□□ 1.36
CLN6-207ENST00000566347 SEC23AQ15436 765 aa23.54■■□□□ 1.36
CLN6-207ENST00000566347 MFSD5Q6N075 450 aa23.54■■□□□ 1.36
CLN6-207ENST00000566347 MCF2L2Q86YR7 1114 aa23.54■■□□□ 1.36
CLN6-207ENST00000566347 RNPC3Q96LT9 517 aaKnown RBP23.54■■□□□ 1.36
CLN6-207ENST00000566347 STXBP5LQ9Y2K9 1186 aa23.54■■□□□ 1.36
CLN6-207ENST00000566347 MYH6P13533 1939 aa23.54■■□□□ 1.36
CLN6-207ENST00000566347 NKRFO15226 690 aaKnown RBP eCLIP23.53■■□□□ 1.36
CLN6-207ENST00000566347 PTGS1P23219 599 aa23.53■■□□□ 1.36
CLN6-207ENST00000566347 CPT1AP50416 773 aa23.53■■□□□ 1.36
CLN6-207ENST00000566347 EPHB4P54760 987 aa23.53■■□□□ 1.36
CLN6-207ENST00000566347 SMAD3P84022 425 aaKnown RBP23.53■■□□□ 1.36
CLN6-207ENST00000566347 QRICH1Q2TAL8 776 aa23.53■■□□□ 1.36
CLN6-207ENST00000566347 TMEM63BQ5T3F8 832 aa23.53■■□□□ 1.36
CLN6-207ENST00000566347 ZNF697Q5TEC3 545 aa23.53■■□□□ 1.36
CLN6-207ENST00000566347 SCFD2Q8WU76 684 aa23.53■■□□□ 1.36
CLN6-207ENST00000566347 JMJD4Q9H9V9 463 aa23.53■■□□□ 1.36
CLN6-207ENST00000566347 MRPL11Q9Y3B7 192 aaKnown RBP23.53■■□□□ 1.36
CLN6-207ENST00000566347 SGSM2O43147 1006 aa23.52■■□□□ 1.36
CLN6-207ENST00000566347 CD4P01730 458 aa23.52■■□□□ 1.36
CLN6-207ENST00000566347 CYP21A2P08686 494 aa23.52■■□□□ 1.36
CLN6-207ENST00000566347 PTH1RQ03431 593 aa23.52■■□□□ 1.36
CLN6-207ENST00000566347 PPIGQ13427 754 aaKnown RBP eCLIP23.52■■□□□ 1.367e-7■□□□□ 9.4
CLN6-207ENST00000566347 PPP2R5BQ15173 497 aa23.52■■□□□ 1.36
CLN6-207ENST00000566347 BRDTQ58F21 947 aaPredicted RBP23.52■■□□□ 1.36
CLN6-207ENST00000566347 CYB5R4Q7L1T6 521 aa23.52■■□□□ 1.36
CLN6-207ENST00000566347 FBXO11Q86XK2 927 aa23.52■■□□□ 1.36
CLN6-207ENST00000566347 POLR3EQ9NVU0 708 aa23.52■■□□□ 1.36
CLN6-207ENST00000566347 RALYLQ86SE5 291 aaKnown RBP23.51■■□□□ 1.35
CLN6-207ENST00000566347 TMEM199Q8N511 208 aa23.51■■□□□ 1.35
CLN6-207ENST00000566347 OR6J1Q8NGC5 347 aa23.51■■□□□ 1.35
CLN6-207ENST00000566347 VAT1LQ9HCJ6 419 aa23.51■■□□□ 1.35
CLN6-207ENST00000566347 ERICH2A1L162 156 aa23.5■■□□□ 1.35
CLN6-207ENST00000566347 GRIN2DO15399 1336 aa23.5■■□□□ 1.35
CLN6-207ENST00000566347 KLRF2D3W0D1 207 aa23.49■■□□□ 1.35
CLN6-207ENST00000566347 TTLL4Q14679 1199 aa23.49■■□□□ 1.35
CLN6-207ENST00000566347 SART3Q15020 963 aaKnown RBP23.49■■□□□ 1.35
CLN6-207ENST00000566347 STAG2Q8N3U4 1231 aa23.49■■□□□ 1.35
CLN6-207ENST00000566347 NCOA7Q8NI08 942 aa23.49■■□□□ 1.35
CLN6-207ENST00000566347 SYTL5Q8TDW5 730 aaPredicted RBP23.49■■□□□ 1.35
CLN6-207ENST00000566347 NSUN6Q8TEA1 469 aaKnown RBP23.49■■□□□ 1.35
CLN6-207ENST00000566347 AMNQ9BXJ7 453 aa23.49■■□□□ 1.35
CLN6-207ENST00000566347 PPP1R12CQ9BZL4 782 aa23.49■■□□□ 1.35
CLN6-207ENST00000566347 GPHNQ9NQX3 736 aaPredicted RBP23.49■■□□□ 1.35
CLN6-207ENST00000566347 MAD2L2Q9UI95 211 aa23.49■■□□□ 1.35
CLN6-207ENST00000566347 PALM3A6NDB9 673 aaPredicted RBP23.48■■□□□ 1.35
CLN6-207ENST00000566347 E7EWF7 191 aa23.48■■□□□ 1.35
CLN6-207ENST00000566347 IFIT3O14879 490 aaKnown RBP23.48■■□□□ 1.35
CLN6-207ENST00000566347 SLC17A8Q8NDX2 589 aa23.48■■□□□ 1.35
CLN6-207ENST00000566347 TBC1D5Q92609 795 aa23.48■■□□□ 1.35
CLN6-207ENST00000566347 IWS1Q96ST2 819 aa23.48■■□□□ 1.35
CLN6-207ENST00000566347 KPNA6O60684 536 aa23.47■■□□□ 1.35
CLN6-207ENST00000566347 TXNP10599 105 aaKnown RBP23.47■■□□□ 1.35
CLN6-207ENST00000566347 PSMC6P62333 389 aa23.47■■□□□ 1.35
CLN6-207ENST00000566347 PURAQ00577 322 aaKnown RBP23.47■■□□□ 1.35
CLN6-207ENST00000566347 MAP4K1Q92918 833 aa23.47■■□□□ 1.35
CLN6-207ENST00000566347 MTMR8Q96EF0 704 aa23.47■■□□□ 1.35
CLN6-207ENST00000566347 GUCD1Q96NT3 240 aa23.47■■□□□ 1.35
CLN6-207ENST00000566347 TAAR1Q96RJ0 339 aa23.47■■□□□ 1.35
CLN6-207ENST00000566347 RMDN3Q96TC7 470 aa23.47■■□□□ 1.35
CLN6-207ENST00000566347 MTG1Q9BT17 334 aaPredicted RBP23.47■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms