RNA–Protein interactions for RNA: ENST00000566240.1

CNOT1-209, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 4

Gene CNOT1, Length 567 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-209ENST00000566240 STOML1Q9UBI4 398 aa6.85□□□□□ -1.31
CNOT1-209ENST00000566240 TMEFF2Q9UIK5 374 aaPredicted RBP6.85□□□□□ -1.31
CNOT1-209ENST00000566240 RAXQ9Y2V3 346 aa6.85□□□□□ -1.31
CNOT1-209ENST00000566240 FAM170BA6NMN3 283 aa6.84□□□□□ -1.31
CNOT1-209ENST00000566240 GPR39O43194 453 aa6.84□□□□□ -1.31
CNOT1-209ENST00000566240 KATNA1O75449 491 aa6.84□□□□□ -1.31
CNOT1-209ENST00000566240 ALDH1L1O75891 902 aa6.84□□□□□ -1.31
CNOT1-209ENST00000566240 PLS3P13797 630 aa6.84□□□□□ -1.31
CNOT1-209ENST00000566240 LTBRP36941 435 aa6.84□□□□□ -1.31
CNOT1-209ENST00000566240 STAT4Q14765 748 aa6.84□□□□□ -1.31
CNOT1-209ENST00000566240 EEF1DP3Q658K8 133 aa6.84□□□□□ -1.31
CNOT1-209ENST00000566240 RCSD1Q6JBY9 416 aa6.84□□□□□ -1.31
CNOT1-209ENST00000566240 ABHD17CQ6PCB6 329 aa6.84□□□□□ -1.31
CNOT1-209ENST00000566240 LHFPL2Q6ZUX7 228 aa6.84□□□□□ -1.31
CNOT1-209ENST00000566240 ZNF765Q7L2R6 523 aa6.84□□□□□ -1.31
CNOT1-209ENST00000566240 NECAB2Q7Z6G3 386 aa6.84□□□□□ -1.31
CNOT1-209ENST00000566240 DDX53Q86TM3 631 aaKnown RBP6.84□□□□□ -1.31
CNOT1-209ENST00000566240 ANKLE2Q86XL3 938 aa6.84□□□□□ -1.31
CNOT1-209ENST00000566240 CCDC103Q8IW40 242 aa6.84□□□□□ -1.31
CNOT1-209ENST00000566240 FBXL6Q8N531 539 aa6.84□□□□□ -1.31
CNOT1-209ENST00000566240 USP7Q93009 1102 aa6.84□□□□□ -1.31
CNOT1-209ENST00000566240 TTC1Q99614 292 aa6.84□□□□□ -1.31
CNOT1-209ENST00000566240 ORAI3Q9BRQ5 295 aa6.84□□□□□ -1.31
CNOT1-209ENST00000566240 CLEC1BQ9P126 229 aa6.84□□□□□ -1.31
CNOT1-209ENST00000566240 FAN1Q9Y2M0 1017 aa6.84□□□□□ -1.31
CNOT1-209ENST00000566240 EID1Q9Y6B2 187 aa6.84□□□□□ -1.31
CNOT1-209ENST00000566240 ARVCFO00192 962 aa6.83□□□□□ -1.32
CNOT1-209ENST00000566240 GSTM1P09488 218 aa6.83□□□□□ -1.32
CNOT1-209ENST00000566240 SCNN1BP51168 640 aa6.83□□□□□ -1.32
CNOT1-209ENST00000566240 NKAPLQ5M9Q1 402 aa6.83□□□□□ -1.32
CNOT1-209ENST00000566240 DUSP27Q5VZP5 1158 aa6.83□□□□□ -1.32
CNOT1-209ENST00000566240 IQCEQ6IPM2 695 aa6.83□□□□□ -1.32
CNOT1-209ENST00000566240 TSPYL5Q86VY4 417 aaPredicted RBP6.83□□□□□ -1.32
CNOT1-209ENST00000566240 KIF18BQ86Y91 864 aa6.83□□□□□ -1.32
CNOT1-209ENST00000566240 KSR1Q8IVT5 923 aa6.83□□□□□ -1.32
CNOT1-209ENST00000566240 USHBP1Q8N6Y0 703 aa6.83□□□□□ -1.32
CNOT1-209ENST00000566240 LINC00116Q8NCU8 138 aa6.83□□□□□ -1.32
CNOT1-209ENST00000566240 OR2W6PQ8NHA6 318 aa6.83□□□□□ -1.32
CNOT1-209ENST00000566240 PUM2Q8TB72 1066 aaKnown RBP eCLIP6.83□□□□□ -1.32
CNOT1-209ENST00000566240 PI4K2BQ8TCG2 481 aa6.83□□□□□ -1.32
CNOT1-209ENST00000566240 DIO2Q92813 273 aa6.83□□□□□ -1.32
CNOT1-209ENST00000566240 MFSD14AQ96MC6 490 aa6.83□□□□□ -1.32
CNOT1-209ENST00000566240 IFT22Q9H7X7 185 aa6.83□□□□□ -1.32
CNOT1-209ENST00000566240 XPO5Q9HAV4 1204 aaKnown RBP eCLIP6.83□□□□□ -1.32
CNOT1-209ENST00000566240 TPSG1Q9NRR2 321 aa6.83□□□□□ -1.32
CNOT1-209ENST00000566240 TCEAL9Q9UHQ7 104 aa6.83□□□□□ -1.32
CNOT1-209ENST00000566240 NEMP1O14524 444 aa6.82□□□□□ -1.32
CNOT1-209ENST00000566240 ZEB2O60315 1214 aa6.82□□□□□ -1.32
CNOT1-209ENST00000566240 MSCO60682 206 aa6.82□□□□□ -1.32
CNOT1-209ENST00000566240 ZNF205O95201 554 aa6.82□□□□□ -1.32
CNOT1-209ENST00000566240 SYPP08247 313 aa6.82□□□□□ -1.32
CNOT1-209ENST00000566240 LCP1P13796 627 aa6.82□□□□□ -1.32
CNOT1-209ENST00000566240 BPIP17213 487 aa6.82□□□□□ -1.32
CNOT1-209ENST00000566240 OXCT1P55809 520 aa6.82□□□□□ -1.32
CNOT1-209ENST00000566240 PCBP3P57721 371 aaKnown RBP6.82□□□□□ -1.32
CNOT1-209ENST00000566240 KCNAB2Q13303 367 aa6.82□□□□□ -1.32
CNOT1-209ENST00000566240 TTF1Q15361 905 aaPredicted RBP6.82□□□□□ -1.32
CNOT1-209ENST00000566240 NKPD1Q17RQ9 610 aa6.82□□□□□ -1.32
CNOT1-209ENST00000566240 RTP2Q5QGT7 225 aa6.82□□□□□ -1.32
CNOT1-209ENST00000566240 CDKAL1Q5VV42 579 aa6.82□□□□□ -1.32
CNOT1-209ENST00000566240 LBX2Q6XYB7 198 aa6.82□□□□□ -1.32
CNOT1-209ENST00000566240 ZC3H7AQ8IWR0 971 aaKnown RBP6.82□□□□□ -1.32
CNOT1-209ENST00000566240 RAVER1Q8IY67 606 aaKnown RBP6.82□□□□□ -1.32
CNOT1-209ENST00000566240 ASPSCR1Q9BZE9 553 aa6.82□□□□□ -1.32
CNOT1-209ENST00000566240 SCO2A0A1W2PP80 73 aa6.81□□□□□ -1.32
CNOT1-209ENST00000566240 SSU72P8A0A1W2PR75 194 aa6.81□□□□□ -1.32
CNOT1-209ENST00000566240 WASH4PA8MWX3 477 aa6.81□□□□□ -1.32
CNOT1-209ENST00000566240 GLRX3O76003 335 aaKnown RBP6.81□□□□□ -1.32
CNOT1-209ENST00000566240 PAMP19021 973 aa6.81□□□□□ -1.32
CNOT1-209ENST00000566240 TPP2P29144 1249 aaPredicted RBP6.81□□□□□ -1.32
CNOT1-209ENST00000566240 EPHB1P54762 984 aa6.81□□□□□ -1.32
CNOT1-209ENST00000566240 PAK1Q13153 545 aa6.81□□□□□ -1.32
CNOT1-209ENST00000566240 MTMR1Q13613 665 aa6.81□□□□□ -1.32
CNOT1-209ENST00000566240 SKOR2Q2VWA4 1001 aaPredicted RBP6.81□□□□□ -1.32
CNOT1-209ENST00000566240 ARHGAP27Q6ZUM4 889 aa6.81□□□□□ -1.32
CNOT1-209ENST00000566240 SPATS2Q86XZ4 545 aaKnown RBP6.81□□□□□ -1.32
CNOT1-209ENST00000566240 IGSF22Q8N9C0 903 aa6.81□□□□□ -1.32
CNOT1-209ENST00000566240 RCBTB1Q8NDN9 531 aa6.81□□□□□ -1.32
CNOT1-209ENST00000566240 PCDH19Q8TAB3 1148 aa6.81□□□□□ -1.32
CNOT1-209ENST00000566240 MMP19Q99542 508 aa6.81□□□□□ -1.32
CNOT1-209ENST00000566240 ALG1Q9BT22 464 aa6.81□□□□□ -1.32
CNOT1-209ENST00000566240 TCFL5Q9UL49 500 aa6.81□□□□□ -1.32
CNOT1-209ENST00000566240 TRBV23OR9-2A0A075B6M9 112 aa6.8□□□□□ -1.32
CNOT1-209ENST00000566240 NPHP3-ACAD11A0A0J9YXS1 232 aa6.8□□□□□ -1.32
CNOT1-209ENST00000566240 CBX4O00257 560 aa6.8□□□□□ -1.32
CNOT1-209ENST00000566240 DYRK3O43781 588 aa6.8□□□□□ -1.32
CNOT1-209ENST00000566240 F2P00734 622 aa6.8□□□□□ -1.32
CNOT1-209ENST00000566240 F13BP05160 661 aa6.8□□□□□ -1.32
CNOT1-209ENST00000566240 CKMP06732 381 aa6.8□□□□□ -1.32
CNOT1-209ENST00000566240 SRGAP2CP0DJJ0 459 aa6.8□□□□□ -1.32
CNOT1-209ENST00000566240 ID4P47928 161 aa6.8□□□□□ -1.32
CNOT1-209ENST00000566240 TMPRSS15P98073 1019 aa6.8□□□□□ -1.32
CNOT1-209ENST00000566240 ITKQ08881 620 aa6.8□□□□□ -1.32
CNOT1-209ENST00000566240 SART3Q15020 963 aaKnown RBP6.8□□□□□ -1.32
CNOT1-209ENST00000566240 RNF43Q68DV7 783 aa6.8□□□□□ -1.32
CNOT1-209ENST00000566240 NXPE1Q8N323 547 aa6.8□□□□□ -1.32
CNOT1-209ENST00000566240 TP53INP1Q96A56 240 aa6.8□□□□□ -1.32
CNOT1-209ENST00000566240 HSPA12BQ96MM6 686 aa6.8□□□□□ -1.32
CNOT1-209ENST00000566240 FOXP3Q9BZS1 431 aa6.8□□□□□ -1.32
CNOT1-209ENST00000566240 PUS7LQ9H0K6 701 aaKnown RBP6.8□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms