RNA–Protein interactions for RNA: ENST00000564664.5

GTF3C1-204, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 5

Gene GTF3C1, Length 933 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-204ENST00000564664 PNMA1Q8ND90 353 aa14.27□□□□□ -0.13
GTF3C1-204ENST00000564664 RUFY2Q8WXA3 655 aa14.27□□□□□ -0.13
GTF3C1-204ENST00000564664 NEDD4P46934 1319 aa14.26□□□□□ -0.13
GTF3C1-204ENST00000564664 HSFX4A0A1B0GTS1 333 aaPredicted RBP14.26□□□□□ -0.13
GTF3C1-204ENST00000564664 HSFX3A0A1B0GWH4 333 aaPredicted RBP14.26□□□□□ -0.13
GTF3C1-204ENST00000564664 NFIBO00712 420 aa14.26□□□□□ -0.13
GTF3C1-204ENST00000564664 CD4P01730 458 aa14.26□□□□□ -0.13
GTF3C1-204ENST00000564664 RPS6P62753 249 aaKnown RBP14.26□□□□□ -0.13
GTF3C1-204ENST00000564664 BEX3Q00994 111 aa14.26□□□□□ -0.13
GTF3C1-204ENST00000564664 ITGA7Q13683 1181 aa14.26□□□□□ -0.13
GTF3C1-204ENST00000564664 ASPRV1Q53RT3 343 aa14.26□□□□□ -0.13
GTF3C1-204ENST00000564664 BRDTQ58F21 947 aaPredicted RBP14.26□□□□□ -0.13
GTF3C1-204ENST00000564664 MCF2L2Q86YR7 1114 aa14.26□□□□□ -0.13
GTF3C1-204ENST00000564664 RNPC3Q96LT9 517 aaKnown RBP14.26□□□□□ -0.13
GTF3C1-204ENST00000564664 WDR11Q9BZH6 1224 aa14.26□□□□□ -0.13
GTF3C1-204ENST00000564664 PDGFCQ9NRA1 345 aa14.26□□□□□ -0.13
GTF3C1-204ENST00000564664 POLR3EQ9NVU0 708 aa14.26□□□□□ -0.13
GTF3C1-204ENST00000564664 SUPT16HQ9Y5B9 1047 aaKnown RBP14.26□□□□□ -0.13
GTF3C1-204ENST00000564664 ABCB11O95342 1321 aa14.25□□□□□ -0.13
GTF3C1-204ENST00000564664 RAD50Q92878 1312 aa14.25□□□□□ -0.13
GTF3C1-204ENST00000564664 B4E1Z4 1266 aa14.25□□□□□ -0.13
GTF3C1-204ENST00000564664 KPNA6O60684 536 aa14.25□□□□□ -0.13
GTF3C1-204ENST00000564664 EDNRBP24530 442 aa14.25□□□□□ -0.13
GTF3C1-204ENST00000564664 CALML3P27482 149 aa14.25□□□□□ -0.13
GTF3C1-204ENST00000564664 CPT1AP50416 773 aa14.25□□□□□ -0.13
GTF3C1-204ENST00000564664 IRX5P78411 483 aaPredicted RBP14.25□□□□□ -0.13
GTF3C1-204ENST00000564664 PDE4DQ08499 809 aa14.25□□□□□ -0.13
GTF3C1-204ENST00000564664 CXCL17Q6UXB2 119 aa14.25□□□□□ -0.13
GTF3C1-204ENST00000564664 EEPD1Q7L9B9 569 aa14.25□□□□□ -0.13
GTF3C1-204ENST00000564664 FBXO16Q8IX29 292 aaPredicted RBP14.25□□□□□ -0.13
GTF3C1-204ENST00000564664 ZKSCAN3Q9BRR0 538 aa14.25□□□□□ -0.13
GTF3C1-204ENST00000564664 UBAC1Q9BSL1 405 aa14.25□□□□□ -0.13
GTF3C1-204ENST00000564664 SEMA6BQ9H3T3 888 aa14.25□□□□□ -0.13
GTF3C1-204ENST00000564664 COL6A3P12111 3177 aa14.25□□□□□ -0.13
GTF3C1-204ENST00000564664 PARP1P09874 1014 aaKnown RBP14.24□□□□□ -0.13
GTF3C1-204ENST00000564664 EPHB4P54760 987 aa14.24□□□□□ -0.13
GTF3C1-204ENST00000564664 TTC22Q5TAA0 569 aa14.24□□□□□ -0.13
GTF3C1-204ENST00000564664 SAMD3Q8N6K7 520 aa14.24□□□□□ -0.13
GTF3C1-204ENST00000564664 ENAHQ8N8S7 591 aaPredicted RBP14.24□□□□□ -0.13
GTF3C1-204ENST00000564664 SCFD2Q8WU76 684 aa14.24□□□□□ -0.13
GTF3C1-204ENST00000564664 PURBQ96QR8 312 aaKnown RBP14.24□□□□□ -0.13
GTF3C1-204ENST00000564664 UBA5Q9GZZ9 404 aa14.24□□□□□ -0.13
GTF3C1-204ENST00000564664 LAMA2P24043 3122 aaKnown RBP14.24□□□□□ -0.13
GTF3C1-204ENST00000564664 SUPT20HL2P0C7V6 817 aa14.23□□□□□ -0.13
GTF3C1-204ENST00000564664 GOLGA8HP0CJ92 632 aa14.23□□□□□ -0.13
GTF3C1-204ENST00000564664 TRDNQ13061 729 aa14.23□□□□□ -0.13
GTF3C1-204ENST00000564664 TRAF1Q13077 416 aa14.23□□□□□ -0.13
GTF3C1-204ENST00000564664 CDC37Q16543 378 aaPredicted RBP14.23□□□□□ -0.13
GTF3C1-204ENST00000564664 PSRC1Q6PGN9 363 aaPredicted RBP14.23□□□□□ -0.13
GTF3C1-204ENST00000564664 ADGRF4Q8IZF3 695 aa14.23□□□□□ -0.13
GTF3C1-204ENST00000564664 NSUN6Q8TEA1 469 aaKnown RBP14.23□□□□□ -0.13
GTF3C1-204ENST00000564664 GUCD1Q96NT3 240 aa14.23□□□□□ -0.13
GTF3C1-204ENST00000564664 IWS1Q96ST2 819 aa14.23□□□□□ -0.13
GTF3C1-204ENST00000564664 GPHNQ9NQX3 736 aaPredicted RBP14.23□□□□□ -0.13
GTF3C1-204ENST00000564664 MAP3K20Q9NYL2 800 aaKnown RBP14.23□□□□□ -0.13
GTF3C1-204ENST00000564664 MRPL11Q9Y3B7 192 aaKnown RBP14.23□□□□□ -0.13
GTF3C1-204ENST00000564664 U3KPZ7 1027 aaPredicted RBP14.23□□□□□ -0.13
GTF3C1-204ENST00000564664 TNKSO95271 1327 aa14.22□□□□□ -0.13
GTF3C1-204ENST00000564664 TTLL4Q14679 1199 aa14.22□□□□□ -0.13
GTF3C1-204ENST00000564664 TMEM240Q5SV17 173 aa14.22□□□□□ -0.13
GTF3C1-204ENST00000564664 IFIT1BQ5T764 474 aaKnown RBP14.22□□□□□ -0.13
GTF3C1-204ENST00000564664 SLC30A10Q6XR72 485 aa14.22□□□□□ -0.13
GTF3C1-204ENST00000564664 FBXO11Q86XK2 927 aa14.22□□□□□ -0.13
GTF3C1-204ENST00000564664 RPUSD2Q8IZ73 545 aaKnown RBP14.22□□□□□ -0.13
GTF3C1-204ENST00000564664 MTIF3Q9H2K0 278 aaKnown RBP14.22□□□□□ -0.13
GTF3C1-204ENST00000564664 IL23AQ9NPF7 189 aa14.22□□□□□ -0.13
GTF3C1-204ENST00000564664 GRIN2DO15399 1336 aa14.21□□□□□ -0.13
GTF3C1-204ENST00000564664 A6NJR5 290 aa14.21□□□□□ -0.13
GTF3C1-204ENST00000564664 CSF2RAP15509 400 aa14.21□□□□□ -0.13
GTF3C1-204ENST00000564664 PDE4AP27815 886 aa14.21□□□□□ -0.13
GTF3C1-204ENST00000564664 PTPN11Q06124 597 aaPredicted RBP14.21□□□□□ -0.13
GTF3C1-204ENST00000564664 PPP2R5BQ15173 497 aa14.21□□□□□ -0.13
GTF3C1-204ENST00000564664 USH1GQ495M9 461 aa14.21□□□□□ -0.13
GTF3C1-204ENST00000564664 RASIP1Q5U651 963 aa14.21□□□□□ -0.13
GTF3C1-204ENST00000564664 C16orf59Q7L2K0 433 aa14.21□□□□□ -0.13
GTF3C1-204ENST00000564664 OR6J1Q8NGC5 347 aa14.21□□□□□ -0.13
GTF3C1-204ENST00000564664 CDX2Q99626 313 aaPredicted RBP14.21□□□□□ -0.13
GTF3C1-204ENST00000564664 BUD13Q9BRD0 619 aaKnown RBP eCLIP14.21□□□□□ -0.131e-11■■■□□ 14.6
GTF3C1-204ENST00000564664 MTG1Q9BT17 334 aaPredicted RBP14.21□□□□□ -0.13
GTF3C1-204ENST00000564664 HIPK3Q9H422 1215 aa14.21□□□□□ -0.13
GTF3C1-204ENST00000564664 DDX49Q9Y6V7 483 aaKnown RBP14.21□□□□□ -0.13
GTF3C1-204ENST00000564664 FGBP02675 491 aa14.2□□□□□ -0.14
GTF3C1-204ENST00000564664 TXNP10599 105 aaKnown RBP14.2□□□□□ -0.14
GTF3C1-204ENST00000564664 CHMLP26374 656 aa14.2□□□□□ -0.14
GTF3C1-204ENST00000564664 PURAQ00577 322 aaKnown RBP14.2□□□□□ -0.14
GTF3C1-204ENST00000564664 SEC23AQ15436 765 aa14.2□□□□□ -0.14
GTF3C1-204ENST00000564664 STXBP2Q15833 593 aa14.2□□□□□ -0.14
GTF3C1-204ENST00000564664 TMEM63BQ5T3F8 832 aa14.2□□□□□ -0.14
GTF3C1-204ENST00000564664 NFRKBQ6P4R8 1299 aa14.2□□□□□ -0.14
GTF3C1-204ENST00000564664 SYTL5Q8TDW5 730 aaPredicted RBP14.2□□□□□ -0.14
GTF3C1-204ENST00000564664 HERVK_113Q902F9 699 aa14.2□□□□□ -0.14
GTF3C1-204ENST00000564664 FAM161BQ96MY7 647 aa14.2□□□□□ -0.14
GTF3C1-204ENST00000564664 AMNQ9BXJ7 453 aa14.2□□□□□ -0.14
GTF3C1-204ENST00000564664 ALDH8A1Q9H2A2 487 aaPredicted RBP14.2□□□□□ -0.14
GTF3C1-204ENST00000564664 JMJD4Q9H9V9 463 aa14.2□□□□□ -0.14
GTF3C1-204ENST00000564664 LAMA4Q16363 1823 aa14.2□□□□□ -0.14
GTF3C1-204ENST00000564664 A0A0C4DFX4 3053 aa14.19□□□□□ -0.14
GTF3C1-204ENST00000564664 ERICH2A1L162 156 aa14.19□□□□□ -0.14
GTF3C1-204ENST00000564664 PALM3A6NDB9 673 aaPredicted RBP14.19□□□□□ -0.14
GTF3C1-204ENST00000564664 KLRF2D3W0D1 207 aa14.19□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms