RNA–Protein interactions for RNA: ENST00000563783.5

SPG7-208, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 3

Gene SPG7, Length 573 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-208ENST00000563783 SLC43A3Q8NBI5 491 aa29.43■■■□□ 2.3
SPG7-208ENST00000563783 U3KPZ7 1027 aaPredicted RBP29.43■■■□□ 2.3
SPG7-208ENST00000563783 PARP1P09874 1014 aaKnown RBP29.42■■■□□ 2.3
SPG7-208ENST00000563783 RPS6P62753 249 aaKnown RBP29.42■■■□□ 2.3
SPG7-208ENST00000563783 FBXO16Q8IX29 292 aaPredicted RBP29.42■■■□□ 2.3
SPG7-208ENST00000563783 ABCB11O95342 1321 aa29.42■■■□□ 2.3
SPG7-208ENST00000563783 GOLGA8HP0CJ92 632 aa29.41■■■□□ 2.3
SPG7-208ENST00000563783 ITGB8P26012 769 aa29.41■■■□□ 2.3
SPG7-208ENST00000563783 TRDNQ13061 729 aa29.41■■■□□ 2.3
SPG7-208ENST00000563783 SEC23AQ15436 765 aa29.41■■■□□ 2.3
SPG7-208ENST00000563783 SHHQ15465 462 aa29.41■■■□□ 2.3
SPG7-208ENST00000563783 SLC30A10Q6XR72 485 aa29.41■■■□□ 2.3
SPG7-208ENST00000563783 PDGFCQ9NRA1 345 aa29.41■■■□□ 2.3
SPG7-208ENST00000563783 NKRFO15226 690 aaKnown RBP eCLIP29.4■■■□□ 2.3
SPG7-208ENST00000563783 TLR3O15455 904 aaKnown RBP29.4■■■□□ 2.3
SPG7-208ENST00000563783 TIMP1P01033 207 aa29.4■■■□□ 2.3
SPG7-208ENST00000563783 FPGSQ05932 587 aa29.4■■■□□ 2.3
SPG7-208ENST00000563783 CDC37Q16543 378 aaPredicted RBP29.4■■■□□ 2.3
SPG7-208ENST00000563783 IFIT1BQ5T764 474 aaKnown RBP29.4■■■□□ 2.3
SPG7-208ENST00000563783 KIAA1211Q6ZU35 1233 aa29.4■■■□□ 2.3
SPG7-208ENST00000563783 FAM126BQ8IXS8 530 aa29.4■■■□□ 2.3
SPG7-208ENST00000563783 ADGRF4Q8IZF3 695 aa29.4■■■□□ 2.3
SPG7-208ENST00000563783 VTI1AQ96AJ9 217 aa29.4■■■□□ 2.3
SPG7-208ENST00000563783 MTMR10Q9NXD2 777 aa29.4■■■□□ 2.3
SPG7-208ENST00000563783 CALML3P27482 149 aa29.39■■■□□ 2.3
SPG7-208ENST00000563783 IRX5P78411 483 aaPredicted RBP29.39■■■□□ 2.3
SPG7-208ENST00000563783 PURBQ96QR8 312 aaKnown RBP29.39■■■□□ 2.3
SPG7-208ENST00000563783 UBA5Q9GZZ9 404 aa29.39■■■□□ 2.3
SPG7-208ENST00000563783 KIAA1217Q5T5P2 1943 aa29.39■■■□□ 2.3
SPG7-208ENST00000563783 SGSM2O43147 1006 aa29.38■■■□□ 2.29
SPG7-208ENST00000563783 DYNC1LI2O43237 492 aaPredicted RBP29.38■■■□□ 2.29
SPG7-208ENST00000563783 SMAD3P84022 425 aaKnown RBP29.38■■■□□ 2.29
SPG7-208ENST00000563783 BEX3Q00994 111 aa29.38■■■□□ 2.29
SPG7-208ENST00000563783 C9orf50Q5SZB4 431 aa29.38■■■□□ 2.29
SPG7-208ENST00000563783 EEPD1Q7L9B9 569 aa29.38■■■□□ 2.29
SPG7-208ENST00000563783 MCF2L2Q86YR7 1114 aa29.38■■■□□ 2.29
SPG7-208ENST00000563783 SCN10AQ9Y5Y9 1956 aa29.38■■■□□ 2.29
SPG7-208ENST00000563783 COL6A3P12111 3177 aa29.38■■■□□ 2.29
SPG7-208ENST00000563783 CD4P01730 458 aa29.37■■■□□ 2.29
SPG7-208ENST00000563783 CYP21A2P08686 494 aa29.37■■■□□ 2.29
SPG7-208ENST00000563783 PDE4DQ08499 809 aa29.37■■■□□ 2.29
SPG7-208ENST00000563783 MFSD5Q6N075 450 aa29.37■■■□□ 2.29
SPG7-208ENST00000563783 SCFD2Q8WU76 684 aa29.37■■■□□ 2.29
SPG7-208ENST00000563783 WDR11Q9BZH6 1224 aa29.37■■■□□ 2.29
SPG7-208ENST00000563783 STXBP5LQ9Y2K9 1186 aa29.37■■■□□ 2.29
SPG7-208ENST00000563783 USH1GQ495M9 461 aa29.36■■■□□ 2.29
SPG7-208ENST00000563783 CXCL17Q6UXB2 119 aa29.36■■■□□ 2.29
SPG7-208ENST00000563783 JMJD4Q9H9V9 463 aa29.36■■■□□ 2.29
SPG7-208ENST00000563783 POLR3EQ9NVU0 708 aa29.36■■■□□ 2.29
SPG7-208ENST00000563783 MRPL11Q9Y3B7 192 aaKnown RBP29.36■■■□□ 2.29
SPG7-208ENST00000563783 DDX49Q9Y6V7 483 aaKnown RBP29.36■■■□□ 2.29
SPG7-208ENST00000563783 CPT1AP50416 773 aa29.35■■■□□ 2.29
SPG7-208ENST00000563783 GHRHRQ02643 423 aa29.35■■■□□ 2.29
SPG7-208ENST00000563783 TRAF1Q13077 416 aa29.35■■■□□ 2.29
SPG7-208ENST00000563783 QRICH1Q2TAL8 776 aa29.35■■■□□ 2.29
SPG7-208ENST00000563783 FBXO11Q86XK2 927 aa29.35■■■□□ 2.29
SPG7-208ENST00000563783 SAMD3Q8N6K7 520 aa29.35■■■□□ 2.29
SPG7-208ENST00000563783 MTMR8Q96EF0 704 aa29.35■■■□□ 2.29
SPG7-208ENST00000563783 CPVLQ9H3G5 476 aa29.35■■■□□ 2.29
SPG7-208ENST00000563783 MAP3K20Q9NYL2 800 aaKnown RBP29.35■■■□□ 2.29
SPG7-208ENST00000563783 IRX6P78412 446 aaPredicted RBP29.34■■■□□ 2.29
SPG7-208ENST00000563783 PTH1RQ03431 593 aa29.34■■■□□ 2.29
SPG7-208ENST00000563783 PPIGQ13427 754 aaKnown RBP eCLIP29.34■■■□□ 2.296e-10■■■□□ 18.3
SPG7-208ENST00000563783 ITGA7Q13683 1181 aa29.34■■■□□ 2.29
SPG7-208ENST00000563783 BRDTQ58F21 947 aaPredicted RBP29.34■■■□□ 2.29
SPG7-208ENST00000563783 CYB5R4Q7L1T6 521 aa29.34■■■□□ 2.29
SPG7-208ENST00000563783 IWS1Q96ST2 819 aa29.34■■■□□ 2.29
SPG7-208ENST00000563783 SART3Q15020 963 aaKnown RBP29.33■■■□□ 2.29
SPG7-208ENST00000563783 PPP2R5BQ15173 497 aa29.33■■■□□ 2.29
SPG7-208ENST00000563783 Q7L0L9 218 aa29.33■■■□□ 2.29
SPG7-208ENST00000563783 NCOA7Q8NI08 942 aa29.33■■■□□ 2.29
SPG7-208ENST00000563783 NSUN6Q8TEA1 469 aaKnown RBP29.33■■■□□ 2.29
SPG7-208ENST00000563783 MAP4K1Q92918 833 aa29.33■■■□□ 2.29
SPG7-208ENST00000563783 TMEM265A0A087WTH1 108 aa29.32■■■□□ 2.28
SPG7-208ENST00000563783 PALM3A6NDB9 673 aaPredicted RBP29.32■■■□□ 2.28
SPG7-208ENST00000563783 KPNA6O60684 536 aa29.32■■■□□ 2.28
SPG7-208ENST00000563783 RALYLQ86SE5 291 aaKnown RBP29.32■■■□□ 2.28
SPG7-208ENST00000563783 TMEM199Q8N511 208 aa29.32■■■□□ 2.28
SPG7-208ENST00000563783 SYTL5Q8TDW5 730 aaPredicted RBP29.32■■■□□ 2.28
SPG7-208ENST00000563783 RNPC3Q96LT9 517 aaKnown RBP29.32■■■□□ 2.28
SPG7-208ENST00000563783 MTA3Q9BTC8 594 aa29.32■■■□□ 2.28
SPG7-208ENST00000563783 AMNQ9BXJ7 453 aa29.32■■■□□ 2.28
SPG7-208ENST00000563783 BAZ2BQ9UIF8 2168 aaKnown RBP29.32■■■□□ 2.28
SPG7-208ENST00000563783 GRIN2DO15399 1336 aa29.31■■■□□ 2.28
SPG7-208ENST00000563783 ERICH2A1L162 156 aa29.31■■■□□ 2.28
SPG7-208ENST00000563783 KLRF2D3W0D1 207 aa29.31■■■□□ 2.28
SPG7-208ENST00000563783 DHX16O60231 1041 aaKnown RBP29.31■■■□□ 2.28
SPG7-208ENST00000563783 EPHB4P54760 987 aa29.31■■■□□ 2.28
SPG7-208ENST00000563783 TTLL4Q14679 1199 aa29.31■■■□□ 2.28
SPG7-208ENST00000563783 ZNF697Q5TEC3 545 aa29.31■■■□□ 2.28
SPG7-208ENST00000563783 MAD2L2Q9UI95 211 aa29.31■■■□□ 2.28
SPG7-208ENST00000563783 A6NJR5 290 aa29.29■■■□□ 2.28
SPG7-208ENST00000563783 E7EWF7 191 aa29.29■■■□□ 2.28
SPG7-208ENST00000563783 ZBTB5O15062 677 aa29.29■■■□□ 2.28
SPG7-208ENST00000563783 PURAQ00577 322 aaKnown RBP29.29■■■□□ 2.28
SPG7-208ENST00000563783 GRM4Q14833 912 aa29.29■■■□□ 2.28
SPG7-208ENST00000563783 TMEM63BQ5T3F8 832 aa29.29■■■□□ 2.28
SPG7-208ENST00000563783 STAG2Q8N3U4 1231 aa29.29■■■□□ 2.28
SPG7-208ENST00000563783 IFIT3O14879 490 aaKnown RBP29.28■■■□□ 2.28
SPG7-208ENST00000563783 HSD17B4P51659 736 aa29.28■■■□□ 2.28
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms