RNA–Protein interactions for RNA: ENST00000563781.5

HERPUD1-207, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 3

Gene HERPUD1, Length 774 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-207ENST00000563781 MICAL2O94851 1124 aa6.19□□□□□ -1.42
HERPUD1-207ENST00000563781 CYP2D6P10635 497 aa6.19□□□□□ -1.42
HERPUD1-207ENST00000563781 HSPD1P10809 573 aaKnown RBP6.19□□□□□ -1.42
HERPUD1-207ENST00000563781 GNAT2P19087 354 aa6.19□□□□□ -1.42
HERPUD1-207ENST00000563781 TAGLNQ01995 201 aaKnown RBP6.19□□□□□ -1.42
HERPUD1-207ENST00000563781 TYRO3Q06418 890 aa6.19□□□□□ -1.42
HERPUD1-207ENST00000563781 PICALMQ13492 652 aa6.19□□□□□ -1.42
HERPUD1-207ENST00000563781 LAMC2Q13753 1193 aa6.19□□□□□ -1.42
HERPUD1-207ENST00000563781 RASA3Q14644 834 aa6.19□□□□□ -1.42
HERPUD1-207ENST00000563781 ALX1Q15699 326 aa6.19□□□□□ -1.42
HERPUD1-207ENST00000563781 EAPPQ56P03 285 aaPredicted RBP6.19□□□□□ -1.42
HERPUD1-207ENST00000563781 GIMAP6Q6P9H5 292 aa6.19□□□□□ -1.42
HERPUD1-207ENST00000563781 DLK2Q6UY11 383 aa6.19□□□□□ -1.42
HERPUD1-207ENST00000563781 FAM83AQ86UY5 434 aa6.19□□□□□ -1.42
HERPUD1-207ENST00000563781 PNMA8AQ86V59 439 aaPredicted RBP6.19□□□□□ -1.42
HERPUD1-207ENST00000563781 LDHDQ86WU2 507 aa6.19□□□□□ -1.42
HERPUD1-207ENST00000563781 APOBEC3FQ8IUX4 373 aaKnown RBP6.19□□□□□ -1.42
HERPUD1-207ENST00000563781 ETFBKMTQ8IXQ9 262 aa6.19□□□□□ -1.42
HERPUD1-207ENST00000563781 HELQQ8TDG4 1101 aa6.19□□□□□ -1.42
HERPUD1-207ENST00000563781 FAM151AQ8WW52 585 aa6.19□□□□□ -1.42
HERPUD1-207ENST00000563781 CEP63Q96MT8 703 aa6.19□□□□□ -1.42
HERPUD1-207ENST00000563781 DSCC1Q9BVC3 393 aa6.19□□□□□ -1.42
HERPUD1-207ENST00000563781 OSBPL5Q9H0X9 879 aaPredicted RBP6.19□□□□□ -1.42
HERPUD1-207ENST00000563781 TUT1Q9H6E5 874 aaKnown RBP6.19□□□□□ -1.42
HERPUD1-207ENST00000563781 ATP8A2Q9NTI2 1148 aa6.19□□□□□ -1.42
HERPUD1-207ENST00000563781 TMOD2Q9NZR1 351 aa6.19□□□□□ -1.42
HERPUD1-207ENST00000563781 STIM2Q9P246 746 aa6.19□□□□□ -1.42
HERPUD1-207ENST00000563781 SAP30BPQ9UHR5 308 aaKnown RBP6.19□□□□□ -1.42
HERPUD1-207ENST00000563781 DNMT3AQ9Y6K1 912 aaPredicted RBP6.19□□□□□ -1.42
HERPUD1-207ENST00000563781 SLC4A4Q9Y6R1 1079 aa6.19□□□□□ -1.42
HERPUD1-207ENST00000563781 SCN4AP35499 1836 aa6.19□□□□□ -1.42
HERPUD1-207ENST00000563781 COL2A1P02458 1487 aaPredicted RBP6.19□□□□□ -1.42
HERPUD1-207ENST00000563781 DDX60LQ5H9U9 1706 aaKnown RBP6.19□□□□□ -1.42
HERPUD1-207ENST00000563781 CYP2D7A0A087X1C5 515 aa6.18□□□□□ -1.42
HERPUD1-207ENST00000563781 OPLAHO14841 1288 aa6.18□□□□□ -1.42
HERPUD1-207ENST00000563781 ZBTB39O15060 712 aa6.18□□□□□ -1.42
HERPUD1-207ENST00000563781 MYO1BO43795 1136 aa6.18□□□□□ -1.42
HERPUD1-207ENST00000563781 FGAP02671 866 aa6.18□□□□□ -1.42
HERPUD1-207ENST00000563781 SLURP2P0DP57 97 aa6.18□□□□□ -1.42
HERPUD1-207ENST00000563781 FGFR3P22607 806 aa6.18□□□□□ -1.42
HERPUD1-207ENST00000563781 MAPK1P28482 360 aa6.18□□□□□ -1.42
HERPUD1-207ENST00000563781 ERCC5P28715 1186 aaPredicted RBP6.18□□□□□ -1.42
HERPUD1-207ENST00000563781 INPP5BP32019 993 aa6.18□□□□□ -1.42
HERPUD1-207ENST00000563781 USP5P45974 858 aa6.18□□□□□ -1.42
HERPUD1-207ENST00000563781 PLCD1P51178 756 aa6.18□□□□□ -1.42
HERPUD1-207ENST00000563781 CTBSQ01459 385 aa6.18□□□□□ -1.42
HERPUD1-207ENST00000563781 FMR1Q06787 632 aaKnown RBP eCLIP6.18□□□□□ -1.42
HERPUD1-207ENST00000563781 TCP10Q12799 353 aa6.18□□□□□ -1.42
HERPUD1-207ENST00000563781 SFSWAPQ12872 951 aaKnown RBP6.18□□□□□ -1.42
HERPUD1-207ENST00000563781 SBK1Q52WX2 424 aa6.18□□□□□ -1.42
HERPUD1-207ENST00000563781 PRAMEF18Q5VWM3 479 aa6.18□□□□□ -1.42
HERPUD1-207ENST00000563781 MAP1SQ66K74 1059 aaPredicted RBP6.18□□□□□ -1.42
HERPUD1-207ENST00000563781 CTR9Q6PD62 1173 aa6.18□□□□□ -1.42
HERPUD1-207ENST00000563781 CASC1Q6TDU7 716 aa6.18□□□□□ -1.42
HERPUD1-207ENST00000563781 KRT26Q7Z3Y9 468 aa6.18□□□□□ -1.42
HERPUD1-207ENST00000563781 NOP9Q86U38 636 aaKnown RBP6.18□□□□□ -1.42
HERPUD1-207ENST00000563781 TREML1Q86YW5 311 aa6.18□□□□□ -1.42
HERPUD1-207ENST00000563781 GLYCTKQ8IVS8 523 aa6.18□□□□□ -1.42
HERPUD1-207ENST00000563781 IFNL3Q8IZI9 196 aa6.18□□□□□ -1.42
HERPUD1-207ENST00000563781 MAP4K1Q92918 833 aa6.18□□□□□ -1.42
HERPUD1-207ENST00000563781 CNTNAP3BQ96NU0 1288 aa6.18□□□□□ -1.42
HERPUD1-207ENST00000563781 CNTNAP3Q9BZ76 1288 aa6.18□□□□□ -1.42
HERPUD1-207ENST00000563781 GLIS2Q9BZE0 524 aaPredicted RBP6.18□□□□□ -1.42
HERPUD1-207ENST00000563781 TMEM39BQ9GZU3 492 aa6.18□□□□□ -1.42
HERPUD1-207ENST00000563781 DEFB129Q9H1M3 183 aa6.18□□□□□ -1.42
HERPUD1-207ENST00000563781 DNAJC18Q9H819 358 aa6.18□□□□□ -1.42
HERPUD1-207ENST00000563781 BRD7Q9NPI1 651 aa6.18□□□□□ -1.42
HERPUD1-207ENST00000563781 PPP2R3BQ9Y5P8 575 aa6.18□□□□□ -1.42
HERPUD1-207ENST00000563781 RBM8AQ9Y5S9 174 aaKnown RBP6.18□□□□□ -1.42
HERPUD1-207ENST00000563781 TACC3Q9Y6A5 838 aa6.18□□□□□ -1.42
HERPUD1-207ENST00000563781 TAF6LQ9Y6J9 622 aa6.18□□□□□ -1.42
HERPUD1-207ENST00000563781 MYH7P12883 1935 aa6.18□□□□□ -1.42
HERPUD1-207ENST00000563781 MYH2Q9UKX2 1941 aa6.18□□□□□ -1.42
HERPUD1-207ENST00000563781 ZMYM6O95789 1325 aa6.18□□□□□ -1.42
HERPUD1-207ENST00000563781 ROBO3Q96MS0 1386 aa6.18□□□□□ -1.42
HERPUD1-207ENST00000563781 TRAF5O00463 557 aa6.17□□□□□ -1.42
HERPUD1-207ENST00000563781 C2CD2LO14523 706 aa6.17□□□□□ -1.42
HERPUD1-207ENST00000563781 WIPF1O43516 503 aa6.17□□□□□ -1.42
HERPUD1-207ENST00000563781 NPR3P17342 541 aa6.17□□□□□ -1.42
HERPUD1-207ENST00000563781 MX2P20592 715 aa6.17□□□□□ -1.42
HERPUD1-207ENST00000563781 TDO2P48775 406 aa6.17□□□□□ -1.42
HERPUD1-207ENST00000563781 TNNI2P48788 182 aa6.17□□□□□ -1.42
HERPUD1-207ENST00000563781 IDH3AP50213 366 aa6.17□□□□□ -1.42
HERPUD1-207ENST00000563781 ARHGAP4P98171 946 aa6.17□□□□□ -1.42
HERPUD1-207ENST00000563781 GABPAQ06546 454 aa6.17□□□□□ -1.42
HERPUD1-207ENST00000563781 TNFAIP1Q13829 316 aa6.17□□□□□ -1.42
HERPUD1-207ENST00000563781 TSNAXIP1Q2TAA8 658 aa6.17□□□□□ -1.42
HERPUD1-207ENST00000563781 SLC4A8Q2Y0W8 1093 aa6.17□□□□□ -1.42
HERPUD1-207ENST00000563781 NBPF12Q5TAG4 269 aaPredicted RBP6.17□□□□□ -1.42
HERPUD1-207ENST00000563781 C12orf60Q5U649 245 aa6.17□□□□□ -1.42
HERPUD1-207ENST00000563781 CDC37L1Q7L3B6 337 aa6.17□□□□□ -1.42
HERPUD1-207ENST00000563781 USP48Q86UV5 1035 aa6.17□□□□□ -1.42
HERPUD1-207ENST00000563781 METTL16Q86W50 562 aaKnown RBP6.17□□□□□ -1.42
HERPUD1-207ENST00000563781 TBC1D10CQ8IV04 446 aa6.17□□□□□ -1.42
HERPUD1-207ENST00000563781 SLC43A3Q8NBI5 491 aa6.17□□□□□ -1.42
HERPUD1-207ENST00000563781 PIK3R5Q8WYR1 880 aa6.17□□□□□ -1.42
HERPUD1-207ENST00000563781 ARMC5Q96C12 935 aa6.17□□□□□ -1.42
HERPUD1-207ENST00000563781 DCPSQ96C86 337 aaKnown RBP6.17□□□□□ -1.42
HERPUD1-207ENST00000563781 CDCA5Q96FF9 252 aa6.17□□□□□ -1.42
HERPUD1-207ENST00000563781 BACH2Q9BYV9 841 aa6.17□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms