RNA–Protein interactions for RNA: ENST00000563560.1

RPUSD1-204, Transcript of RNA pseudouridylate synthase domain containing 1, humanhuman

TSL 2

Gene RPUSD1, Length 587 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD1-204ENST00000563560 PDGFCQ9NRA1 345 aa17.24■□□□□ 0.35
RPUSD1-204ENST00000563560 ZHX1Q9UKY1 873 aaPredicted RBP17.24■□□□□ 0.35
RPUSD1-204ENST00000563560 ERICH2A1L162 156 aa17.23■□□□□ 0.35
RPUSD1-204ENST00000563560 HSD17B4P51659 736 aa17.23■□□□□ 0.35
RPUSD1-204ENST00000563560 GJA9P57773 515 aa17.23■□□□□ 0.35
RPUSD1-204ENST00000563560 SART3Q15020 963 aaKnown RBP17.23■□□□□ 0.35
RPUSD1-204ENST00000563560 C1orf53Q5VUE5 145 aa17.23■□□□□ 0.35
RPUSD1-204ENST00000563560 FBXO11Q86XK2 927 aa17.23■□□□□ 0.35
RPUSD1-204ENST00000563560 DNERQ8NFT8 737 aa17.23■□□□□ 0.35
RPUSD1-204ENST00000563560 PIGSQ96S52 555 aa17.23■□□□□ 0.35
RPUSD1-204ENST00000563560 SPZ1Q9BXG8 430 aa17.23■□□□□ 0.35
RPUSD1-204ENST00000563560 LRRC2Q9BYS8 371 aa17.23■□□□□ 0.35
RPUSD1-204ENST00000563560 SENP6Q9GZR1 1112 aaPredicted RBP17.23■□□□□ 0.35
RPUSD1-204ENST00000563560 VAT1LQ9HCJ6 419 aa17.23■□□□□ 0.35
RPUSD1-204ENST00000563560 PTPDC1A2A3K4 754 aa17.22■□□□□ 0.35
RPUSD1-204ENST00000563560 EVI5O60447 810 aa17.22■□□□□ 0.35
RPUSD1-204ENST00000563560 SMPD1P17405 629 aa17.22■□□□□ 0.35
RPUSD1-204ENST00000563560 SMARCA1P28370 1054 aa17.22■□□□□ 0.35
RPUSD1-204ENST00000563560 ADCYAP1R1P41586 468 aa17.22■□□□□ 0.35
RPUSD1-204ENST00000563560 NEK1Q96PY6 1258 aa17.22■□□□□ 0.35
RPUSD1-204ENST00000563560 TSEN34Q9BSV6 310 aaKnown RBP17.22■□□□□ 0.35
RPUSD1-204ENST00000563560 AMNQ9BXJ7 453 aa17.22■□□□□ 0.35
RPUSD1-204ENST00000563560 VTA1Q9NP79 307 aa17.22■□□□□ 0.35
RPUSD1-204ENST00000563560 PCDH10Q9P2E7 1040 aa17.22■□□□□ 0.35
RPUSD1-204ENST00000563560 ADD3Q9UEY8 706 aaKnown RBP17.22■□□□□ 0.35
RPUSD1-204ENST00000563560 COLQQ9Y215 455 aaPredicted RBP17.22■□□□□ 0.35
RPUSD1-204ENST00000563560 SNX14Q9Y5W7 946 aa17.22■□□□□ 0.35
RPUSD1-204ENST00000563560 SCN10AQ9Y5Y9 1956 aa17.21■□□□□ 0.35
RPUSD1-204ENST00000563560 EPB41L2O43491 1005 aaKnown RBP17.21■□□□□ 0.35
RPUSD1-204ENST00000563560 PLEKHA8P1O95397 391 aa17.21■□□□□ 0.35
RPUSD1-204ENST00000563560 CALML3P27482 149 aa17.21■□□□□ 0.35
RPUSD1-204ENST00000563560 RNF20Q5VTR2 975 aa17.21■□□□□ 0.35
RPUSD1-204ENST00000563560 CASC1Q6TDU7 716 aa17.21■□□□□ 0.35
RPUSD1-204ENST00000563560 SLC39A5Q6ZMH5 540 aa17.21■□□□□ 0.35
RPUSD1-204ENST00000563560 CATIPQ7Z7H3 387 aa17.21■□□□□ 0.35
RPUSD1-204ENST00000563560 FBXO16Q8IX29 292 aaPredicted RBP17.21■□□□□ 0.35
RPUSD1-204ENST00000563560 TMTC2Q8N394 836 aa17.21■□□□□ 0.35
RPUSD1-204ENST00000563560 SRBD1Q8N5C6 995 aaKnown RBP17.21■□□□□ 0.35
RPUSD1-204ENST00000563560 GDF15Q99988 308 aa17.21■□□□□ 0.35
RPUSD1-204ENST00000563560 MYH7BA7E2Y1 1941 aa17.2■□□□□ 0.34
RPUSD1-204ENST00000563560 A0A1W2PQ45 241 aaPredicted RBP17.2■□□□□ 0.34
RPUSD1-204ENST00000563560 A0A1W2PQY0 241 aa17.2■□□□□ 0.34
RPUSD1-204ENST00000563560 FUT2Q10981 343 aa17.2■□□□□ 0.34
RPUSD1-204ENST00000563560 DHX32Q7L7V1 743 aaKnown RBP17.2■□□□□ 0.34
RPUSD1-204ENST00000563560 C7orf61Q8IZ16 206 aa17.2■□□□□ 0.34
RPUSD1-204ENST00000563560 TCEANC2Q96MN5 208 aa17.2■□□□□ 0.34
RPUSD1-204ENST00000563560 TAAR1Q96RJ0 339 aa17.2■□□□□ 0.34
RPUSD1-204ENST00000563560 AGXT2Q9BYV1 514 aa17.2■□□□□ 0.34
RPUSD1-204ENST00000563560 BRPF3Q9ULD4 1205 aa17.2■□□□□ 0.34
RPUSD1-204ENST00000563560 MRPL11Q9Y3B7 192 aaKnown RBP17.2■□□□□ 0.34
RPUSD1-204ENST00000563560 NR2E3Q9Y5X4 410 aa17.2■□□□□ 0.34
RPUSD1-204ENST00000563560 NID2Q14112 1375 aa17.19■□□□□ 0.34
RPUSD1-204ENST00000563560 PNMA6FA0A0J9YX94 578 aa17.19■□□□□ 0.34
RPUSD1-204ENST00000563560 KBTBD13C9JR72 458 aa17.19■□□□□ 0.34
RPUSD1-204ENST00000563560 RXRAP19793 462 aa17.19■□□□□ 0.34
RPUSD1-204ENST00000563560 ACLYP53396 1101 aa17.19■□□□□ 0.34
RPUSD1-204ENST00000563560 TNFAIP2Q03169 654 aa17.19■□□□□ 0.34
RPUSD1-204ENST00000563560 IQSEC1Q6DN90 963 aa17.19■□□□□ 0.34
RPUSD1-204ENST00000563560 APOA5Q6Q788 366 aa17.19■□□□□ 0.34
RPUSD1-204ENST00000563560 RNF180Q86T96 592 aa17.19■□□□□ 0.34
RPUSD1-204ENST00000563560 FBXL16Q8N461 479 aa17.19■□□□□ 0.34
RPUSD1-204ENST00000563560 FAM217BQ9NTX9 383 aaPredicted RBP17.19■□□□□ 0.34
RPUSD1-204ENST00000563560 Q9Y3F1 56 aa17.19■□□□□ 0.34
RPUSD1-204ENST00000563560 FRMPD4Q14CM0 1322 aa17.19■□□□□ 0.34
RPUSD1-204ENST00000563560 MOXD2PA6NHM9 499 aa17.18■□□□□ 0.34
RPUSD1-204ENST00000563560 CPA1P15085 419 aa17.18■□□□□ 0.34
RPUSD1-204ENST00000563560 ATN1P54259 1190 aaPredicted RBP17.18■□□□□ 0.34
RPUSD1-204ENST00000563560 RTP1P59025 263 aa17.18■□□□□ 0.34
RPUSD1-204ENST00000563560 KCNA10Q16322 511 aa17.18■□□□□ 0.34
RPUSD1-204ENST00000563560 DUSP28Q4G0W2 176 aa17.18■□□□□ 0.34
RPUSD1-204ENST00000563560 HABP4Q5JVS0 413 aaKnown RBP17.18■□□□□ 0.34
RPUSD1-204ENST00000563560 CCDC62Q6P9F0 684 aa17.18■□□□□ 0.34
RPUSD1-204ENST00000563560 EEPD1Q7L9B9 569 aa17.18■□□□□ 0.34
RPUSD1-204ENST00000563560 NUP133Q8WUM0 1156 aa17.18■□□□□ 0.34
RPUSD1-204ENST00000563560 FERMT2Q96AC1 680 aa17.18■□□□□ 0.34
RPUSD1-204ENST00000563560 USP26Q9BXU7 913 aa17.18■□□□□ 0.34
RPUSD1-204ENST00000563560 MAP3K20Q9NYL2 800 aaKnown RBP17.18■□□□□ 0.34
RPUSD1-204ENST00000563560 RBM27Q9P2N5 1060 aaKnown RBP17.18■□□□□ 0.34
RPUSD1-204ENST00000563560 PCDHA1Q9Y5I3 950 aa17.18■□□□□ 0.34
RPUSD1-204ENST00000563560 DOCK5Q9H7D0 1870 aa17.18■□□□□ 0.34
RPUSD1-204ENST00000563560 DHX16O60231 1041 aaKnown RBP17.17■□□□□ 0.34
RPUSD1-204ENST00000563560 ARIH2O95376 493 aa17.17■□□□□ 0.34
RPUSD1-204ENST00000563560 CDK7P50613 346 aa17.17■□□□□ 0.34
RPUSD1-204ENST00000563560 KRT32Q14532 448 aa17.17■□□□□ 0.34
RPUSD1-204ENST00000563560 CHRDL2Q6WN34 429 aa17.17■□□□□ 0.34
RPUSD1-204ENST00000563560 TMTC3Q6ZXV5 915 aa17.17■□□□□ 0.34
RPUSD1-204ENST00000563560 HOMER1Q86YM7 354 aa17.17■□□□□ 0.34
RPUSD1-204ENST00000563560 MCF2L2Q86YR7 1114 aa17.17■□□□□ 0.34
RPUSD1-204ENST00000563560 CMTR1Q8N1G2 835 aaKnown RBP17.17■□□□□ 0.34
RPUSD1-204ENST00000563560 SAMD3Q8N6K7 520 aa17.17■□□□□ 0.34
RPUSD1-204ENST00000563560 FANCBQ8NB91 859 aa17.17■□□□□ 0.34
RPUSD1-204ENST00000563560 ZMYND8Q9ULU4 1186 aaPredicted RBP17.17■□□□□ 0.34
RPUSD1-204ENST00000563560 CNTNAP5Q8WYK1 1306 aa17.17■□□□□ 0.34
RPUSD1-204ENST00000563560 RGS20O76081 388 aa17.16■□□□□ 0.34
RPUSD1-204ENST00000563560 ASGR1P07306 291 aa17.16■□□□□ 0.34
RPUSD1-204ENST00000563560 C6orf222P0C671 652 aaPredicted RBP17.16■□□□□ 0.34
RPUSD1-204ENST00000563560 SYN1P17600 705 aa17.16■□□□□ 0.34
RPUSD1-204ENST00000563560 BMP8BP34820 402 aa17.16■□□□□ 0.34
RPUSD1-204ENST00000563560 TRIM60Q495X7 471 aa17.16■□□□□ 0.34
RPUSD1-204ENST00000563560 TLK2Q86UE8 772 aa17.16■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms