RNA–Protein interactions for RNA: ENST00000563416.3

LINC00254-201, long intergenic non-protein coding RNA 254, humanhuman

TSL 3 BASIC

Gene LINC00254, Length 662 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00254-201ENST00000563416 GALK1P51570 392 aa7.43□□□□□ -1.22
LINC00254-201ENST00000563416 TMEM62Q0P6H9 643 aa7.43□□□□□ -1.22
LINC00254-201ENST00000563416 PKN1Q16512 942 aa7.43□□□□□ -1.22
LINC00254-201ENST00000563416 SOGA3Q5TF21 947 aa7.43□□□□□ -1.22
LINC00254-201ENST00000563416 OLFML2BQ68BL8 750 aa7.43□□□□□ -1.22
LINC00254-201ENST00000563416 BTN2A2Q8WVV5 523 aa7.43□□□□□ -1.22
LINC00254-201ENST00000563416 SREK1Q8WXA9 508 aaKnown RBP7.43□□□□□ -1.22
LINC00254-201ENST00000563416 COPS5Q92905 334 aa7.43□□□□□ -1.22
LINC00254-201ENST00000563416 PPP1R16BQ96T49 567 aa7.43□□□□□ -1.22
LINC00254-201ENST00000563416 SIRPGQ9P1W8 387 aa7.43□□□□□ -1.22
LINC00254-201ENST00000563416 CPP00450 1065 aa7.42□□□□□ -1.22
LINC00254-201ENST00000563416 MPOP05164 745 aa7.42□□□□□ -1.22
LINC00254-201ENST00000563416 NLGN2Q8NFZ4 835 aa7.42□□□□□ -1.22
LINC00254-201ENST00000563416 SGSM3Q96HU1 749 aa7.42□□□□□ -1.22
LINC00254-201ENST00000563416 SLC26A8Q96RN1 970 aa7.42□□□□□ -1.22
LINC00254-201ENST00000563416 KRTAP4-8Q9BYQ9 185 aa7.42□□□□□ -1.22
LINC00254-201ENST00000563416 PDLIM7Q9NR12 457 aa7.42□□□□□ -1.22
LINC00254-201ENST00000563416 HRKO00198 91 aa7.41□□□□□ -1.22
LINC00254-201ENST00000563416 ABLIM1O14639 778 aa7.41□□□□□ -1.22
LINC00254-201ENST00000563416 EFEMP2O95967 443 aa7.41□□□□□ -1.22
LINC00254-201ENST00000563416 SNRPB2P08579 225 aaKnown RBP7.41□□□□□ -1.22
LINC00254-201ENST00000563416 ERVFRD-1P60508 538 aa7.41□□□□□ -1.22
LINC00254-201ENST00000563416 ZNF648Q5T619 568 aaPredicted RBP7.41□□□□□ -1.22
LINC00254-201ENST00000563416 IQCEQ6IPM2 695 aa7.41□□□□□ -1.22
LINC00254-201ENST00000563416 ZNF605Q86T29 641 aa7.41□□□□□ -1.22
LINC00254-201ENST00000563416 BHLHE22Q8NFJ8 381 aaPredicted RBP7.41□□□□□ -1.22
LINC00254-201ENST00000563416 LGR4Q9BXB1 951 aa7.41□□□□□ -1.22
LINC00254-201ENST00000563416 ZNF552Q9H707 407 aaPredicted RBP7.41□□□□□ -1.22
LINC00254-201ENST00000563416 PEX10O60683 326 aa7.4□□□□□ -1.22
LINC00254-201ENST00000563416 THBDP07204 575 aa7.4□□□□□ -1.22
LINC00254-201ENST00000563416 KCNJ6P48051 423 aa7.4□□□□□ -1.22
LINC00254-201ENST00000563416 MVKQ03426 396 aa7.4□□□□□ -1.22
LINC00254-201ENST00000563416 RBL2Q08999 1139 aa7.4□□□□□ -1.22
LINC00254-201ENST00000563416 MESP2Q0VG99 397 aa7.4□□□□□ -1.22
LINC00254-201ENST00000563416 SYDE1Q6ZW31 735 aaPredicted RBP7.4□□□□□ -1.22
LINC00254-201ENST00000563416 CABP7Q86V35 215 aa7.4□□□□□ -1.22
LINC00254-201ENST00000563416 LRRC47Q8N1G4 583 aaKnown RBP7.4□□□□□ -1.22
LINC00254-201ENST00000563416 ZNF669Q96BR6 464 aaPredicted RBP7.4□□□□□ -1.22
LINC00254-201ENST00000563416 MMP19Q99542 508 aa7.4□□□□□ -1.22
LINC00254-201ENST00000563416 TNFRSF12AQ9NP84 129 aa7.4□□□□□ -1.22
LINC00254-201ENST00000563416 GPRC5CQ9NQ84 441 aa7.4□□□□□ -1.22
LINC00254-201ENST00000563416 CLEC1BQ9P126 229 aa7.4□□□□□ -1.22
LINC00254-201ENST00000563416 MSRB2Q9Y3D2 182 aa7.4□□□□□ -1.22
LINC00254-201ENST00000563416 WRNQ14191 1432 aaPredicted RBP eCLIP7.4□□□□□ -1.22
LINC00254-201ENST00000563416 RAD54L2Q9Y4B4 1467 aa7.4□□□□□ -1.22
LINC00254-201ENST00000563416 ABCA10Q8WWZ4 1543 aa7.39□□□□□ -1.23
LINC00254-201ENST00000563416 SOGA1O94964 1423 aa7.39□□□□□ -1.23
LINC00254-201ENST00000563416 PDPK1O15530 556 aa7.39□□□□□ -1.23
LINC00254-201ENST00000563416 TBX1O43435 398 aa7.39□□□□□ -1.23
LINC00254-201ENST00000563416 NPHS1O60500 1241 aa7.39□□□□□ -1.23
LINC00254-201ENST00000563416 SCG5P05408 212 aa7.39□□□□□ -1.23
LINC00254-201ENST00000563416 PLS3P13797 630 aa7.39□□□□□ -1.23
LINC00254-201ENST00000563416 ECI1P42126 302 aa7.39□□□□□ -1.23
LINC00254-201ENST00000563416 PPP2R2AP63151 447 aa7.39□□□□□ -1.23
LINC00254-201ENST00000563416 HSP90AA2PQ14568 343 aaPredicted RBP7.39□□□□□ -1.23
LINC00254-201ENST00000563416 KIR3DS1Q14943 382 aa7.39□□□□□ -1.23
LINC00254-201ENST00000563416 NR1I3Q14994 352 aa7.39□□□□□ -1.23
LINC00254-201ENST00000563416 E4F1Q66K89 784 aaPredicted RBP7.39□□□□□ -1.23
LINC00254-201ENST00000563416 BICRALQ6AI39 1079 aa7.39□□□□□ -1.23
LINC00254-201ENST00000563416 TMEM132EQ6IEE7 984 aa7.39□□□□□ -1.23
LINC00254-201ENST00000563416 CPNE8Q86YQ8 564 aa7.39□□□□□ -1.23
LINC00254-201ENST00000563416 CCDC113Q9H0I3 377 aa7.39□□□□□ -1.23
LINC00254-201ENST00000563416 A0A1W2PQU0 124 aa7.38□□□□□ -1.23
LINC00254-201ENST00000563416 CCDC85CA6NKD9 419 aa7.38□□□□□ -1.23
LINC00254-201ENST00000563416 NFIBO00712 420 aa7.38□□□□□ -1.23
LINC00254-201ENST00000563416 SEMA7AO75326 666 aa7.38□□□□□ -1.23
LINC00254-201ENST00000563416 TMEM253P0C7T8 217 aa7.38□□□□□ -1.23
LINC00254-201ENST00000563416 RASGRF1Q13972 1273 aa7.38□□□□□ -1.23
LINC00254-201ENST00000563416 RAB3GAP1Q15042 981 aa7.38□□□□□ -1.23
LINC00254-201ENST00000563416 MEFVO15553 781 aaPredicted RBP7.37□□□□□ -1.23
LINC00254-201ENST00000563416 SRGAP3O43295 1099 aa7.37□□□□□ -1.23
LINC00254-201ENST00000563416 C8AP07357 584 aa7.37□□□□□ -1.23
LINC00254-201ENST00000563416 MSL3P1P0C860 447 aa7.37□□□□□ -1.23
LINC00254-201ENST00000563416 GFRA1P56159 465 aa7.37□□□□□ -1.23
LINC00254-201ENST00000563416 KCNAB2Q13303 367 aa7.37□□□□□ -1.23
LINC00254-201ENST00000563416 MTERF2Q49AM1 385 aa7.37□□□□□ -1.23
LINC00254-201ENST00000563416 ACBD5Q5T8D3 534 aaPredicted RBP7.37□□□□□ -1.23
LINC00254-201ENST00000563416 LZTR1Q8N653 840 aa7.37□□□□□ -1.23
LINC00254-201ENST00000563416 NPLOC4Q8TAT6 608 aa7.37□□□□□ -1.23
LINC00254-201ENST00000563416 FRS2Q8WU20 508 aa7.37□□□□□ -1.23
LINC00254-201ENST00000563416 KCTD13Q8WZ19 329 aa7.37□□□□□ -1.23
LINC00254-201ENST00000563416 KCNN1Q92952 543 aa7.37□□□□□ -1.23
LINC00254-201ENST00000563416 AARSD1Q9BTE6 412 aaKnown RBP7.37□□□□□ -1.23
LINC00254-201ENST00000563416 GOLGA2P5Q9HBQ8 144 aa7.37□□□□□ -1.23
LINC00254-201ENST00000563416 TEX51A0A1B0GUA7 166 aa7.36□□□□□ -1.23
LINC00254-201ENST00000563416 C7orf72A4D263 438 aa7.36□□□□□ -1.23
LINC00254-201ENST00000563416 NUDT19A8MXV4 375 aa7.36□□□□□ -1.23
LINC00254-201ENST00000563416 MYO1BO43795 1136 aa7.36□□□□□ -1.23
LINC00254-201ENST00000563416 TSPAN15O95858 294 aa7.36□□□□□ -1.23
LINC00254-201ENST00000563416 CYBBP04839 570 aa7.36□□□□□ -1.23
LINC00254-201ENST00000563416 YBX3P16989 372 aaKnown RBP eCLIP7.36□□□□□ -1.23
LINC00254-201ENST00000563416 TACR1P25103 407 aa7.36□□□□□ -1.23
LINC00254-201ENST00000563416 SRSF3P84103 164 aaKnown RBP7.36□□□□□ -1.23
LINC00254-201ENST00000563416 IFRD2Q12894 506 aaPredicted RBP7.36□□□□□ -1.23
LINC00254-201ENST00000563416 PAQR3Q6TCH7 311 aa7.36□□□□□ -1.23
LINC00254-201ENST00000563416 LRP10Q7Z4F1 713 aa7.36□□□□□ -1.23
LINC00254-201ENST00000563416 USP33Q8TEY7 942 aa7.36□□□□□ -1.23
LINC00254-201ENST00000563416 DIO2Q92813 273 aa7.36□□□□□ -1.23
LINC00254-201ENST00000563416 DRC1Q96MC2 740 aa7.36□□□□□ -1.23
LINC00254-201ENST00000563416 MCOLN1Q9GZU1 580 aa7.36□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms