RNA–Protein interactions for RNA: ENST00000563235.5

SMG1-207, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 2

Gene SMG1, Length 2,910 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-207ENST00000563235 PPFIA2O75334 1257 aa5.41□□□□□ -1.54
SMG1-207ENST00000563235 SASH1O94885 1247 aa5.41□□□□□ -1.54
SMG1-207ENST00000563235 KRT1P04264 644 aa5.41□□□□□ -1.54
SMG1-207ENST00000563235 LRRC74AQ0VAA2 488 aa5.41□□□□□ -1.54
SMG1-207ENST00000563235 GPR158Q5T848 1215 aa5.41□□□□□ -1.54
SMG1-207ENST00000563235 ARHGEF18Q6ZSZ5 1173 aa5.41□□□□□ -1.54
SMG1-207ENST00000563235 HEATR4Q86WZ0 1026 aa5.41□□□□□ -1.54
SMG1-207ENST00000563235 SLC7A3Q8WY07 619 aa5.41□□□□□ -1.54
SMG1-207ENST00000563235 ASB2Q96Q27 587 aa5.41□□□□□ -1.54
SMG1-207ENST00000563235 MYD88Q99836 296 aa5.41□□□□□ -1.54
SMG1-207ENST00000563235 NACA2Q9H009 215 aa5.41□□□□□ -1.54
SMG1-207ENST00000563235 LMAN2LQ9H0V9 348 aa5.41□□□□□ -1.54
SMG1-207ENST00000563235 DONSONQ9NYP3 566 aa5.41□□□□□ -1.54
SMG1-207ENST00000563235 CAMSAP3Q9P1Y5 1249 aaPredicted RBP5.41□□□□□ -1.54
SMG1-207ENST00000563235 HECAQ9UBI9 543 aaPredicted RBP5.41□□□□□ -1.54
SMG1-207ENST00000563235 MTRRQ9UBK8 725 aa5.41□□□□□ -1.54
SMG1-207ENST00000563235 CLIP2Q9UDT6 1046 aa5.41□□□□□ -1.54
SMG1-207ENST00000563235 FAM198AQ9UFP1 575 aa5.41□□□□□ -1.54
SMG1-207ENST00000563235 CDC23Q9UJX2 597 aa5.41□□□□□ -1.54
SMG1-207ENST00000563235 STRIP2Q9ULQ0 834 aa5.41□□□□□ -1.54
SMG1-207ENST00000563235 CNPY2Q9Y2B0 182 aa5.41□□□□□ -1.54
SMG1-207ENST00000563235 ABCA10Q8WWZ4 1543 aa5.4□□□□□ -1.54
SMG1-207ENST00000563235 RCCD1A6NED2 376 aa5.4□□□□□ -1.54
SMG1-207ENST00000563235 HSPA4LO95757 839 aa5.4□□□□□ -1.54
SMG1-207ENST00000563235 TBX18O95935 607 aa5.4□□□□□ -1.54
SMG1-207ENST00000563235 PAHP00439 452 aa5.4□□□□□ -1.54
SMG1-207ENST00000563235 ZKSCAN1P17029 563 aaPredicted RBP5.4□□□□□ -1.54
SMG1-207ENST00000563235 ALDH1B1P30837 517 aa5.4□□□□□ -1.54
SMG1-207ENST00000563235 HOXC12P31275 282 aa5.4□□□□□ -1.54
SMG1-207ENST00000563235 CRKP46108 304 aa5.4□□□□□ -1.54
SMG1-207ENST00000563235 IREB2P48200 963 aaKnown RBP5.4□□□□□ -1.54
SMG1-207ENST00000563235 KIF11P52732 1056 aa5.4□□□□□ -1.54
SMG1-207ENST00000563235 PPP2R3AQ06190 1150 aa5.4□□□□□ -1.54
SMG1-207ENST00000563235 SYDE2Q5VT97 1194 aa5.4□□□□□ -1.54
SMG1-207ENST00000563235 CRTC1Q6UUV9 634 aa5.4□□□□□ -1.54
SMG1-207ENST00000563235 RAPH1Q70E73 1250 aa5.4□□□□□ -1.54
SMG1-207ENST00000563235 LRRTM3Q86VH5 581 aa5.4□□□□□ -1.54
SMG1-207ENST00000563235 MAP4K3Q8IVH8 894 aa5.4□□□□□ -1.54
SMG1-207ENST00000563235 SYNPOQ8N3V7 929 aa5.4□□□□□ -1.54
SMG1-207ENST00000563235 CNDP1Q96KN2 507 aa5.4□□□□□ -1.54
SMG1-207ENST00000563235 UBXN10Q96LJ8 280 aa5.4□□□□□ -1.54
SMG1-207ENST00000563235 MYLK2Q9H1R3 596 aa5.4□□□□□ -1.54
SMG1-207ENST00000563235 TRMT13Q9NUP7 481 aaKnown RBP5.4□□□□□ -1.54
SMG1-207ENST00000563235 CHIC2Q9UKJ5 165 aa5.4□□□□□ -1.54
SMG1-207ENST00000563235 GJD2Q9UKL4 321 aa5.4□□□□□ -1.54
SMG1-207ENST00000563235 GPR34Q9UPC5 381 aa5.4□□□□□ -1.54
SMG1-207ENST00000563235 MAPRE3Q9UPY8 281 aa5.4□□□□□ -1.54
SMG1-207ENST00000563235 DAGLAQ9Y4D2 1042 aa5.4□□□□□ -1.54
SMG1-207ENST00000563235 TRIM17Q9Y577 477 aa5.4□□□□□ -1.54
SMG1-207ENST00000563235 RIMS1Q86UR5 1692 aaKnown RBP5.4□□□□□ -1.55
SMG1-207ENST00000563235 SOS1Q07889 1333 aaPredicted RBP5.4□□□□□ -1.55
SMG1-207ENST00000563235 ITIH6Q6UXX5 1313 aa5.4□□□□□ -1.55
SMG1-207ENST00000563235 ASXL2Q76L83 1435 aa5.4□□□□□ -1.55
SMG1-207ENST00000563235 ARAP3Q8WWN8 1544 aa5.4□□□□□ -1.55
SMG1-207ENST00000563235 KIF3CO14782 793 aa5.4□□□□□ -1.55
SMG1-207ENST00000563235 FRS3O43559 492 aa5.4□□□□□ -1.55
SMG1-207ENST00000563235 GNAT2P19087 354 aa5.4□□□□□ -1.55
SMG1-207ENST00000563235 SDSP20132 328 aa5.4□□□□□ -1.55
SMG1-207ENST00000563235 TMOD1P28289 359 aa5.4□□□□□ -1.55
SMG1-207ENST00000563235 ID4P47928 161 aa5.4□□□□□ -1.55
SMG1-207ENST00000563235 NPTX2P47972 431 aa5.4□□□□□ -1.55
SMG1-207ENST00000563235 MEA1Q16626 185 aa5.4□□□□□ -1.55
SMG1-207ENST00000563235 MAJINQ3KP22 176 aa5.4□□□□□ -1.55
SMG1-207ENST00000563235 PCNX4Q63HM2 1172 aa5.4□□□□□ -1.55
SMG1-207ENST00000563235 SHQ1Q6PI26 577 aaKnown RBP5.4□□□□□ -1.55
SMG1-207ENST00000563235 CCDC149Q6ZUS6 474 aa5.4□□□□□ -1.55
SMG1-207ENST00000563235 BEND5Q7L4P6 421 aa5.4□□□□□ -1.55
SMG1-207ENST00000563235 HDAC2Q92769 488 aaKnown RBP5.4□□□□□ -1.55
SMG1-207ENST00000563235 HPS3Q969F9 1004 aa5.4□□□□□ -1.55
SMG1-207ENST00000563235 DHRS1Q96LJ7 313 aa5.4□□□□□ -1.55
SMG1-207ENST00000563235 DHRS4Q9BTZ2 278 aa5.4□□□□□ -1.55
SMG1-207ENST00000563235 UTP18Q9Y5J1 556 aaKnown RBP eCLIP5.4□□□□□ -1.55
SMG1-207ENST00000563235 POTEB3A0JP26 581 aa5.39□□□□□ -1.55
SMG1-207ENST00000563235 PLOD2O00469 737 aa5.39□□□□□ -1.55
SMG1-207ENST00000563235 EIF1AYO14602 144 aaKnown RBP5.39□□□□□ -1.55
SMG1-207ENST00000563235 E2F6O75461 281 aa5.39□□□□□ -1.55
SMG1-207ENST00000563235 USP2O75604 605 aaPredicted RBP5.39□□□□□ -1.55
SMG1-207ENST00000563235 GNRH1P01148 92 aa5.39□□□□□ -1.55
SMG1-207ENST00000563235 LPOP22079 712 aaPredicted RBP5.39□□□□□ -1.55
SMG1-207ENST00000563235 PBLDP30039 288 aaPredicted RBP5.39□□□□□ -1.55
SMG1-207ENST00000563235 STAT1P42224 750 aa5.39□□□□□ -1.55
SMG1-207ENST00000563235 MTHFRP42898 656 aa5.39□□□□□ -1.55
SMG1-207ENST00000563235 SESN3P58005 492 aa5.39□□□□□ -1.55
SMG1-207ENST00000563235 MMEL1Q495T6 779 aa5.39□□□□□ -1.55
SMG1-207ENST00000563235 FBXL19Q6PCT2 694 aa5.39□□□□□ -1.55
SMG1-207ENST00000563235 POTEBQ6S5H4 581 aa5.39□□□□□ -1.55
SMG1-207ENST00000563235 ABRAXAS1Q6UWZ7 409 aa5.39□□□□□ -1.55
SMG1-207ENST00000563235 PACS1Q6VY07 963 aa5.39□□□□□ -1.55
SMG1-207ENST00000563235 TRIM74Q86UV6 250 aa5.39□□□□□ -1.55
SMG1-207ENST00000563235 TRIM73Q86UV7 250 aa5.39□□□□□ -1.55
SMG1-207ENST00000563235 TRIM50Q86XT4 487 aa5.39□□□□□ -1.55
SMG1-207ENST00000563235 EPHX4Q8IUS5 362 aa5.39□□□□□ -1.55
SMG1-207ENST00000563235 HIC2Q96JB3 615 aa5.39□□□□□ -1.55
SMG1-207ENST00000563235 CLMNQ96JQ2 1002 aa5.39□□□□□ -1.55
SMG1-207ENST00000563235 NEK1Q96PY6 1258 aa5.39□□□□□ -1.55
SMG1-207ENST00000563235 IQCGQ9H095 443 aaKnown RBP5.39□□□□□ -1.55
SMG1-207ENST00000563235 EXOC1Q9NV70 894 aa5.39□□□□□ -1.55
SMG1-207ENST00000563235 MTF2Q9Y483 593 aaPredicted RBP5.39□□□□□ -1.55
SMG1-207ENST00000563235 FHAD1B1AJZ9 1412 aa5.39□□□□□ -1.55
SMG1-207ENST00000563235 RIMBP2O15034 1052 aa5.39□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms