RNA–Protein interactions for RNA: ENST00000561976.5

VPS9D1-202, Transcript of VPS9 domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS9D1, Length 2,791 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-202ENST00000561976 GTF2A1P52655 376 aaPredicted RBP15.54■□□□□ 0.08
VPS9D1-202ENST00000561976 CDK17Q00537 523 aa15.54■□□□□ 0.08
VPS9D1-202ENST00000561976 SEMA3FQ13275 785 aa15.54■□□□□ 0.08
VPS9D1-202ENST00000561976 ICE2Q659A1 982 aa15.54■□□□□ 0.08
VPS9D1-202ENST00000561976 NFRKBQ6P4R8 1299 aa15.54■□□□□ 0.08
VPS9D1-202ENST00000561976 MMRN2Q9H8L6 949 aa15.54■□□□□ 0.08
VPS9D1-202ENST00000561976 ATP8A2Q9NTI2 1148 aa15.54■□□□□ 0.08
VPS9D1-202ENST00000561976 MCM9Q9NXL9 1143 aa15.54■□□□□ 0.08
VPS9D1-202ENST00000561976 SMARCAL1Q9NZC9 954 aa15.54■□□□□ 0.08
VPS9D1-202ENST00000561976 ARPP21Q9UBL0 812 aaPredicted RBP15.54■□□□□ 0.08
VPS9D1-202ENST00000561976 A0A087WUV0 522 aaPredicted RBP15.53■□□□□ 0.08
VPS9D1-202ENST00000561976 GOLGA8KD6RF30 607 aa15.53■□□□□ 0.08
VPS9D1-202ENST00000561976 OPA1O60313 960 aa15.53■□□□□ 0.08
VPS9D1-202ENST00000561976 CAMTA2O94983 1202 aa15.53■□□□□ 0.08
VPS9D1-202ENST00000561976 EIF4A3P38919 411 aaKnown RBP15.53■□□□□ 0.08
VPS9D1-202ENST00000561976 CRKLP46109 303 aaKnown RBP15.53■□□□□ 0.08
VPS9D1-202ENST00000561976 KIF11P52732 1056 aa15.53■□□□□ 0.08
VPS9D1-202ENST00000561976 GNGT1P63211 74 aa15.53■□□□□ 0.08
VPS9D1-202ENST00000561976 TXNRD1Q16881 649 aa15.53■□□□□ 0.08
VPS9D1-202ENST00000561976 INTS5Q6P9B9 1019 aaKnown RBP15.53■□□□□ 0.08
VPS9D1-202ENST00000561976 TADA2BQ86TJ2 420 aa15.53■□□□□ 0.08
VPS9D1-202ENST00000561976 BCAS4Q8TDM0 211 aa15.53■□□□□ 0.08
VPS9D1-202ENST00000561976 HPS3Q969F9 1004 aa15.53■□□□□ 0.08
VPS9D1-202ENST00000561976 OSBPL9Q96SU4 736 aa15.53■□□□□ 0.08
VPS9D1-202ENST00000561976 EHD4Q9H223 541 aa15.53■□□□□ 0.08
VPS9D1-202ENST00000561976 CUEDC2Q9H467 287 aa15.53■□□□□ 0.08
VPS9D1-202ENST00000561976 ARHGAP20Q9P2F6 1191 aa15.53■□□□□ 0.08
VPS9D1-202ENST00000561976 CACNA1SQ13698 1873 aa15.53■□□□□ 0.08
VPS9D1-202ENST00000561976 SHTN1A0MZ66 631 aa15.53■□□□□ 0.08
VPS9D1-202ENST00000561976 EXOC5O00471 708 aa15.53■□□□□ 0.08
VPS9D1-202ENST00000561976 NKRFO15226 690 aaKnown RBP eCLIP15.53■□□□□ 0.08
VPS9D1-202ENST00000561976 PAFAH1B1P43034 410 aa15.53■□□□□ 0.08
VPS9D1-202ENST00000561976 FIGNQ5HY92 759 aa15.53■□□□□ 0.08
VPS9D1-202ENST00000561976 TTC19Q6DKK2 380 aaPredicted RBP15.53■□□□□ 0.08
VPS9D1-202ENST00000561976 HYOU1Q9Y4L1 999 aa15.53■□□□□ 0.08
VPS9D1-202ENST00000561976 LAD1O00515 517 aa15.53■□□□□ 0.08
VPS9D1-202ENST00000561976 TCP1P17987 556 aaKnown RBP15.53■□□□□ 0.08
VPS9D1-202ENST00000561976 ATP6V1AP38606 617 aa15.53■□□□□ 0.08
VPS9D1-202ENST00000561976 NAP1L1P55209 391 aaKnown RBP15.53■□□□□ 0.08
VPS9D1-202ENST00000561976 LETM2Q2VYF4 491 aa15.53■□□□□ 0.08
VPS9D1-202ENST00000561976 MAGEF1Q9HAY2 307 aa15.53■□□□□ 0.08
VPS9D1-202ENST00000561976 SLC39A2Q9NP94 309 aa15.53■□□□□ 0.08
VPS9D1-202ENST00000561976 EHD2Q9NZN4 543 aa15.53■□□□□ 0.08
VPS9D1-202ENST00000561976 PLAGL2Q9UPG8 496 aa15.53■□□□□ 0.08
VPS9D1-202ENST00000561976 DLEC1Q9Y238 1755 aa15.52■□□□□ 0.08
VPS9D1-202ENST00000561976 M0R2N6 131 aa15.52■□□□□ 0.08
VPS9D1-202ENST00000561976 CCNT1O60563 726 aaKnown RBP15.52■□□□□ 0.08
VPS9D1-202ENST00000561976 HSF2BPO75031 334 aa15.52■□□□□ 0.08
VPS9D1-202ENST00000561976 GNAQP50148 359 aa15.52■□□□□ 0.08
VPS9D1-202ENST00000561976 EPHB4P54760 987 aa15.52■□□□□ 0.08
VPS9D1-202ENST00000561976 AMPD3Q01432 767 aa15.52■□□□□ 0.08
VPS9D1-202ENST00000561976 CNNM4Q6P4Q7 775 aa15.52■□□□□ 0.08
VPS9D1-202ENST00000561976 ZSCAN29Q8IWY8 852 aaPredicted RBP15.52■□□□□ 0.08
VPS9D1-202ENST00000561976 ANKRD13CQ8N6S4 541 aa15.52■□□□□ 0.08
VPS9D1-202ENST00000561976 NHSL1Q5SYE7 1610 aa15.52■□□□□ 0.07
VPS9D1-202ENST00000561976 NCK2O43639 380 aa15.52■□□□□ 0.07
VPS9D1-202ENST00000561976 ADAMTS2O95450 1211 aa15.52■□□□□ 0.07
VPS9D1-202ENST00000561976 OR52Z1P0C646 297 aa15.52■□□□□ 0.07
VPS9D1-202ENST00000561976 USP17L8P0C7I0 530 aa15.52■□□□□ 0.07
VPS9D1-202ENST00000561976 PRPHP41219 470 aa15.52■□□□□ 0.07
VPS9D1-202ENST00000561976 PPP1R2P41236 205 aa15.52■□□□□ 0.07
VPS9D1-202ENST00000561976 GBP6Q6ZN66 633 aa15.52■□□□□ 0.07
VPS9D1-202ENST00000561976 RRAGAQ7L523 313 aa15.52■□□□□ 0.07
VPS9D1-202ENST00000561976 PRLRP16471 622 aa15.51■□□□□ 0.07
VPS9D1-202ENST00000561976 PRDX5P30044 214 aa15.51■□□□□ 0.07
VPS9D1-202ENST00000561976 TECP42680 631 aa15.51■□□□□ 0.07
VPS9D1-202ENST00000561976 MAGEA1P43355 309 aa15.51■□□□□ 0.07
VPS9D1-202ENST00000561976 LIG3P49916 1009 aa15.51■□□□□ 0.07
VPS9D1-202ENST00000561976 VWA3BQ502W6 1294 aa15.51■□□□□ 0.07
VPS9D1-202ENST00000561976 C8orf74Q6P047 294 aa15.51■□□□□ 0.07
VPS9D1-202ENST00000561976 IQCDQ96DY2 449 aa15.51■□□□□ 0.07
VPS9D1-202ENST00000561976 AK8Q96MA6 479 aa15.51■□□□□ 0.07
VPS9D1-202ENST00000561976 C7orf25Q9BPX7 421 aa15.51■□□□□ 0.07
VPS9D1-202ENST00000561976 NDST4Q9H3R1 872 aa15.51■□□□□ 0.07
VPS9D1-202ENST00000561976 STIM2Q9P246 746 aa15.51■□□□□ 0.07
VPS9D1-202ENST00000561976 SLAIN2Q9P270 581 aa15.51■□□□□ 0.07
VPS9D1-202ENST00000561976 MINPP1Q9UNW1 487 aa15.51■□□□□ 0.07
VPS9D1-202ENST00000561976 JAG2Q9Y219 1238 aa15.51■□□□□ 0.07
VPS9D1-202ENST00000561976 FAM169AQ9Y6X4 670 aa15.51■□□□□ 0.07
VPS9D1-202ENST00000561976 EPHB6O15197 1021 aa15.51■□□□□ 0.07
VPS9D1-202ENST00000561976 ERCC3P19447 782 aa15.51■□□□□ 0.07
VPS9D1-202ENST00000561976 HSPA2P54652 639 aa15.51■□□□□ 0.07
VPS9D1-202ENST00000561976 ITIH3Q06033 890 aa15.51■□□□□ 0.07
VPS9D1-202ENST00000561976 DGKHQ86XP1 1220 aa15.51■□□□□ 0.07
VPS9D1-202ENST00000561976 CERS3Q8IU89 383 aa15.51■□□□□ 0.07
VPS9D1-202ENST00000561976 SEMA6BQ9H3T3 888 aa15.51■□□□□ 0.07
VPS9D1-202ENST00000561976 MKNK2Q9HBH9 465 aa15.51■□□□□ 0.07
VPS9D1-202ENST00000561976 IL17RBQ9NRM6 502 aa15.51■□□□□ 0.07
VPS9D1-202ENST00000561976 MAD2L2Q9UI95 211 aa15.51■□□□□ 0.07
VPS9D1-202ENST00000561976 FLT1P17948 1338 aa15.51■□□□□ 0.07
VPS9D1-202ENST00000561976 EIF3HO15372 352 aaKnown RBP eCLIP15.5■□□□□ 0.07
VPS9D1-202ENST00000561976 GRM4Q14833 912 aa15.5■□□□□ 0.07
VPS9D1-202ENST00000561976 SBK1Q52WX2 424 aa15.5■□□□□ 0.07
VPS9D1-202ENST00000561976 GALNT17Q6IS24 598 aa15.5■□□□□ 0.07
VPS9D1-202ENST00000561976 TSEN2Q8NCE0 465 aaKnown RBP15.5■□□□□ 0.07
VPS9D1-202ENST00000561976 RUBCNQ92622 972 aa15.5■□□□□ 0.07
VPS9D1-202ENST00000561976 BSDC1Q9NW68 430 aaPredicted RBP15.5■□□□□ 0.07
VPS9D1-202ENST00000561976 BARHL2Q9NY43 387 aa15.5■□□□□ 0.07
VPS9D1-202ENST00000561976 TFCP2L1Q9NZI6 479 aa15.5■□□□□ 0.07
VPS9D1-202ENST00000561976 LRRC53A6NM62 1247 aa15.5■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms