RNA–Protein interactions for RNA: ENST00000561896.1

MSLN-203, Transcript of mesothelin, humanhuman

TSL 5

Gene MSLN, Length 1,195 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSLN-203ENST00000561896 PALM3A6NDB9 673 aaPredicted RBP29.65■■■□□ 2.34
MSLN-203ENST00000561896 SMPD1P17405 629 aa29.65■■■□□ 2.34
MSLN-203ENST00000561896 EDNRBP24530 442 aa29.65■■■□□ 2.34
MSLN-203ENST00000561896 QRICH1Q2TAL8 776 aa29.65■■■□□ 2.34
MSLN-203ENST00000561896 STOX1Q6ZVD7 989 aa29.65■■■□□ 2.34
MSLN-203ENST00000561896 NOL8Q76FK4 1167 aaKnown RBP29.65■■■□□ 2.34
MSLN-203ENST00000561896 TLK2Q86UE8 772 aa29.65■■■□□ 2.34
MSLN-203ENST00000561896 MCF2L2Q86YR7 1114 aa29.65■■■□□ 2.34
MSLN-203ENST00000561896 MTMR8Q96EF0 704 aa29.65■■■□□ 2.34
MSLN-203ENST00000561896 ESYT1Q9BSJ8 1104 aa29.65■■■□□ 2.34
MSLN-203ENST00000561896 MTA3Q9BTC8 594 aa29.65■■■□□ 2.34
MSLN-203ENST00000561896 MAD2L2Q9UI95 211 aa29.65■■■□□ 2.34
MSLN-203ENST00000561896 TAF6LQ9Y6J9 622 aa29.65■■■□□ 2.34
MSLN-203ENST00000561896 MROH7Q68CQ1 1323 aa29.65■■■□□ 2.34
MSLN-203ENST00000561896 RBM47A0AV96 593 aaKnown RBP29.64■■■□□ 2.34
MSLN-203ENST00000561896 KLRF2D3W0D1 207 aa29.64■■■□□ 2.34
MSLN-203ENST00000561896 CLTBP09497 229 aa29.64■■■□□ 2.34
MSLN-203ENST00000561896 EEPD1Q7L9B9 569 aa29.64■■■□□ 2.34
MSLN-203ENST00000561896 FBXO11Q86XK2 927 aa29.64■■■□□ 2.34
MSLN-203ENST00000561896 STAG2Q8N3U4 1231 aa29.64■■■□□ 2.34
MSLN-203ENST00000561896 LSG1Q9H089 658 aaKnown RBP29.64■■■□□ 2.34
MSLN-203ENST00000561896 AP5M1Q9H0R1 490 aa29.64■■■□□ 2.34
MSLN-203ENST00000561896 PRDM5Q9NQX1 630 aaPredicted RBP29.64■■■□□ 2.34
MSLN-203ENST00000561896 PDGFCQ9NRA1 345 aa29.64■■■□□ 2.34
MSLN-203ENST00000561896 MRPL11Q9Y3B7 192 aaKnown RBP29.64■■■□□ 2.34
MSLN-203ENST00000561896 DHX16O60231 1041 aaKnown RBP29.63■■■□□ 2.33
MSLN-203ENST00000561896 WTAPQ15007 396 aa29.63■■■□□ 2.33
MSLN-203ENST00000561896 DUSP28Q4G0W2 176 aa29.63■■■□□ 2.33
MSLN-203ENST00000561896 GPR153Q6NV75 609 aa29.63■■■□□ 2.33
MSLN-203ENST00000561896 MB21D2Q8IYB1 491 aaPredicted RBP29.63■■■□□ 2.33
MSLN-203ENST00000561896 DDX49Q9Y6V7 483 aaKnown RBP29.63■■■□□ 2.33
MSLN-203ENST00000561896 TRIM43BA6NCK2 446 aa29.62■■■□□ 2.33
MSLN-203ENST00000561896 DCDC2CA8MYV0 355 aa29.62■■■□□ 2.33
MSLN-203ENST00000561896 KIAA0355O15063 1070 aa29.62■■■□□ 2.33
MSLN-203ENST00000561896 CABYRO75952 493 aa29.62■■■□□ 2.33
MSLN-203ENST00000561896 CDK7P50613 346 aa29.62■■■□□ 2.33
MSLN-203ENST00000561896 IRX5P78411 483 aaPredicted RBP29.62■■■□□ 2.33
MSLN-203ENST00000561896 GRM4Q14833 912 aa29.62■■■□□ 2.33
MSLN-203ENST00000561896 FSCN1Q16658 493 aaKnown RBP29.62■■■□□ 2.33
MSLN-203ENST00000561896 TRIM43Q96BQ3 446 aaPredicted RBP29.62■■■□□ 2.33
MSLN-203ENST00000561896 AMNQ9BXJ7 453 aa29.62■■■□□ 2.33
MSLN-203ENST00000561896 A0A0U1RQG5 324 aaPredicted RBP29.61■■■□□ 2.33
MSLN-203ENST00000561896 ZEB2O60315 1214 aa29.61■■■□□ 2.33
MSLN-203ENST00000561896 PQBP1O60828 265 aaKnown RBP29.61■■■□□ 2.33
MSLN-203ENST00000561896 PDE4DQ08499 809 aa29.61■■■□□ 2.33
MSLN-203ENST00000561896 TROAPQ12815 778 aa29.61■■■□□ 2.33
MSLN-203ENST00000561896 SH3RF1Q7Z6J0 888 aa29.61■■■□□ 2.33
MSLN-203ENST00000561896 IGDCC4Q8TDY8 1250 aa29.61■■■□□ 2.33
MSLN-203ENST00000561896 SEZ6LQ9BYH1 1024 aa29.61■■■□□ 2.33
MSLN-203ENST00000561896 VAT1LQ9HCJ6 419 aa29.61■■■□□ 2.33
MSLN-203ENST00000561896 BAZ2BQ9UIF8 2168 aaKnown RBP29.6■■■□□ 2.33
MSLN-203ENST00000561896 SOX1O00570 391 aaPredicted RBP29.6■■■□□ 2.33
MSLN-203ENST00000561896 ZBTB5O15062 677 aa29.6■■■□□ 2.33
MSLN-203ENST00000561896 DYNC1LI2O43237 492 aaPredicted RBP29.6■■■□□ 2.33
MSLN-203ENST00000561896 ANTXR2P58335 489 aa29.6■■■□□ 2.33
MSLN-203ENST00000561896 GHRHRQ02643 423 aa29.6■■■□□ 2.33
MSLN-203ENST00000561896 TRAF1Q13077 416 aa29.6■■■□□ 2.33
MSLN-203ENST00000561896 WDR11Q9BZH6 1224 aa29.6■■■□□ 2.33
MSLN-203ENST00000561896 ARVCFO00192 962 aa29.59■■■□□ 2.33
MSLN-203ENST00000561896 FAAP100Q0VG06 881 aa29.59■■■□□ 2.33
MSLN-203ENST00000561896 TMEM67Q5HYA8 995 aa29.59■■■□□ 2.33
MSLN-203ENST00000561896 CATIPQ7Z7H3 387 aa29.59■■■□□ 2.33
MSLN-203ENST00000561896 SAMD3Q8N6K7 520 aa29.59■■■□□ 2.33
MSLN-203ENST00000561896 SYTL5Q8TDW5 730 aaPredicted RBP29.59■■■□□ 2.33
MSLN-203ENST00000561896 MAP3K14Q99558 947 aa29.59■■■□□ 2.33
MSLN-203ENST00000561896 RIOX1Q9H6W3 641 aa29.59■■■□□ 2.33
MSLN-203ENST00000561896 MAP3K20Q9NYL2 800 aaKnown RBP29.59■■■□□ 2.33
MSLN-203ENST00000561896 NKRFO15226 690 aaKnown RBP eCLIP29.58■■■□□ 2.33
MSLN-203ENST00000561896 BEX3Q00994 111 aa29.58■■■□□ 2.33
MSLN-203ENST00000561896 NECTIN1Q15223 517 aa29.58■■■□□ 2.33
MSLN-203ENST00000561896 NSUN6Q8TEA1 469 aaKnown RBP29.58■■■□□ 2.33
MSLN-203ENST00000561896 BADQ92934 168 aa29.58■■■□□ 2.33
MSLN-203ENST00000561896 VTI1AQ96AJ9 217 aa29.58■■■□□ 2.33
MSLN-203ENST00000561896 IWS1Q96ST2 819 aa29.58■■■□□ 2.33
MSLN-203ENST00000561896 SENP2Q9HC62 589 aa29.58■■■□□ 2.33
MSLN-203ENST00000561896 TMEM39AQ9NV64 488 aa29.58■■■□□ 2.33
MSLN-203ENST00000561896 CHST3Q7LGC8 479 aa29.57■■■□□ 2.32
MSLN-203ENST00000561896 SCFD2Q8WU76 684 aa29.57■■■□□ 2.32
MSLN-203ENST00000561896 TBC1D5Q92609 795 aa29.57■■■□□ 2.32
MSLN-203ENST00000561896 SLC27A2O14975 620 aa29.56■■■□□ 2.32
MSLN-203ENST00000561896 MCM5P33992 734 aa29.56■■■□□ 2.32
MSLN-203ENST00000561896 CASC1Q6TDU7 716 aa29.56■■■□□ 2.32
MSLN-203ENST00000561896 TMTC2Q8N394 836 aa29.56■■■□□ 2.32
MSLN-203ENST00000561896 SLC43A3Q8NBI5 491 aa29.56■■■□□ 2.32
MSLN-203ENST00000561896 LRCH3Q96II8 777 aa29.56■■■□□ 2.32
MSLN-203ENST00000561896 ANO2Q9NQ90 1003 aa29.56■■■□□ 2.32
MSLN-203ENST00000561896 KIAA1217Q5T5P2 1943 aa29.55■■■□□ 2.32
MSLN-203ENST00000561896 LAMA2P24043 3122 aaKnown RBP29.55■■■□□ 2.32
MSLN-203ENST00000561896 RAG1P15918 1043 aa29.55■■■□□ 2.32
MSLN-203ENST00000561896 CREB3L3Q68CJ9 461 aa29.55■■■□□ 2.32
MSLN-203ENST00000561896 CXCL17Q6UXB2 119 aa29.55■■■□□ 2.32
MSLN-203ENST00000561896 TMEM87BQ96K49 555 aa29.55■■■□□ 2.32
MSLN-203ENST00000561896 LY9Q9HBG7 655 aa29.55■■■□□ 2.32
MSLN-203ENST00000561896 TBX21Q9UL17 535 aa29.55■■■□□ 2.32
MSLN-203ENST00000561896 PCDHA1Q9Y5I3 950 aa29.55■■■□□ 2.32
MSLN-203ENST00000561896 DDAH1O94760 285 aa29.54■■■□□ 2.32
MSLN-203ENST00000561896 ITGB8P26012 769 aa29.54■■■□□ 2.32
MSLN-203ENST00000561896 CPT1AP50416 773 aa29.54■■■□□ 2.32
MSLN-203ENST00000561896 HSD17B4P51659 736 aa29.54■■■□□ 2.32
MSLN-203ENST00000561896 PPP2R5BQ15173 497 aa29.54■■■□□ 2.32
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms