RNA–Protein interactions for RNA: ENST00000561817.5

CAPN3-210, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 915 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-210ENST00000561817 OGFOD1Q8N543 542 aa7.49□□□□□ -1.21
CAPN3-210ENST00000561817 C4orf32Q8N8J7 132 aa7.49□□□□□ -1.21
CAPN3-210ENST00000561817 FSIP1Q8NA03 581 aa7.49□□□□□ -1.21
CAPN3-210ENST00000561817 MRPS27Q92552 414 aaKnown RBP7.49□□□□□ -1.21
CAPN3-210ENST00000561817 GPKOWQ92917 476 aaPredicted RBP eCLIP7.49□□□□□ -1.21
CAPN3-210ENST00000561817 TEPSINQ96N21 525 aa7.49□□□□□ -1.21
CAPN3-210ENST00000561817 CSRNP1Q96S65 589 aa7.49□□□□□ -1.21
CAPN3-210ENST00000561817 ZMYND12Q9H0C1 365 aa7.49□□□□□ -1.21
CAPN3-210ENST00000561817 NUP62CLQ9H1M0 184 aa7.49□□□□□ -1.21
CAPN3-210ENST00000561817 TSPY26PQ9H489 355 aa7.49□□□□□ -1.21
CAPN3-210ENST00000561817 KANSL2Q9H9L4 492 aa7.49□□□□□ -1.21
CAPN3-210ENST00000561817 JMJD4Q9H9V9 463 aa7.49□□□□□ -1.21
CAPN3-210ENST00000561817 CABP5Q9NP86 173 aa7.49□□□□□ -1.21
CAPN3-210ENST00000561817 MYOZ2Q9NPC6 264 aa7.49□□□□□ -1.21
CAPN3-210ENST00000561817 PCDHA4Q9UN74 947 aa7.49□□□□□ -1.21
CAPN3-210ENST00000561817 A0A1B0GVL5 298 aa7.48□□□□□ -1.21
CAPN3-210ENST00000561817 A0A1W2PRG0 241 aa7.48□□□□□ -1.21
CAPN3-210ENST00000561817 ESYT2A0FGR8 921 aa7.48□□□□□ -1.21
CAPN3-210ENST00000561817 GOLGA6L4A6NEF3 574 aa7.48□□□□□ -1.21
CAPN3-210ENST00000561817 EDIL3O43854 480 aa7.48□□□□□ -1.21
CAPN3-210ENST00000561817 GDF9O60383 454 aa7.48□□□□□ -1.21
CAPN3-210ENST00000561817 CUTAO60888 179 aa7.48□□□□□ -1.21
CAPN3-210ENST00000561817 PPP1R11O60927 126 aaPredicted RBP7.48□□□□□ -1.21
CAPN3-210ENST00000561817 GDF11O95390 407 aa7.48□□□□□ -1.21
CAPN3-210ENST00000561817 XBP1P17861 261 aa7.48□□□□□ -1.21
CAPN3-210ENST00000561817 CALML3P27482 149 aa7.48□□□□□ -1.21
CAPN3-210ENST00000561817 MARCKSP29966 332 aaPredicted RBP7.48□□□□□ -1.21
CAPN3-210ENST00000561817 TRAPPC10P48553 1259 aa7.48□□□□□ -1.21
CAPN3-210ENST00000561817 GMPSP49915 693 aaPredicted RBP7.48□□□□□ -1.21
CAPN3-210ENST00000561817 GRIN1Q05586 938 aa7.48□□□□□ -1.21
CAPN3-210ENST00000561817 ABCB5Q2M3G0 1257 aa7.48□□□□□ -1.21
CAPN3-210ENST00000561817 GALNT17Q6IS24 598 aa7.48□□□□□ -1.21
CAPN3-210ENST00000561817 ZSCAN29Q8IWY8 852 aaPredicted RBP7.48□□□□□ -1.21
CAPN3-210ENST00000561817 BLIDQ8IZY5 108 aa7.48□□□□□ -1.21
CAPN3-210ENST00000561817 GMCL1P1Q8NEA9 526 aa7.48□□□□□ -1.21
CAPN3-210ENST00000561817 BICD2Q8TD16 824 aa7.48□□□□□ -1.21
CAPN3-210ENST00000561817 DCAF4Q8WV16 495 aa7.48□□□□□ -1.21
CAPN3-210ENST00000561817 PIBF1Q8WXW3 757 aa7.48□□□□□ -1.21
CAPN3-210ENST00000561817 THAP11Q96EK4 314 aa7.48□□□□□ -1.21
CAPN3-210ENST00000561817 GMCL1Q96IK5 515 aa7.48□□□□□ -1.21
CAPN3-210ENST00000561817 CLIC6Q96NY7 704 aa7.48□□□□□ -1.21
CAPN3-210ENST00000561817 PIGSQ96S52 555 aa7.48□□□□□ -1.21
CAPN3-210ENST00000561817 PHOX2BQ99453 314 aa7.48□□□□□ -1.21
CAPN3-210ENST00000561817 TMEM39BQ9GZU3 492 aa7.48□□□□□ -1.21
CAPN3-210ENST00000561817 UBA5Q9GZZ9 404 aa7.48□□□□□ -1.21
CAPN3-210ENST00000561817 SYNPO2Q9UMS6 1093 aa7.48□□□□□ -1.21
CAPN3-210ENST00000561817 PCDHA6Q9UN73 950 aa7.48□□□□□ -1.21
CAPN3-210ENST00000561817 SLC27A5Q9Y2P5 690 aa7.48□□□□□ -1.21
CAPN3-210ENST00000561817 PCDHA8Q9Y5H6 950 aa7.48□□□□□ -1.21
CAPN3-210ENST00000561817 SRPRBQ9Y5M8 271 aaKnown RBP7.48□□□□□ -1.21
CAPN3-210ENST00000561817 ASTN2O75129 1339 aaPredicted RBP7.48□□□□□ -1.21
CAPN3-210ENST00000561817 FRMPD2Q68DX3 1309 aaPredicted RBP7.48□□□□□ -1.21
CAPN3-210ENST00000561817 TRIM75PA6NK02 468 aa7.47□□□□□ -1.21
CAPN3-210ENST00000561817 PHF20L1A8MW92 1017 aa7.47□□□□□ -1.21
CAPN3-210ENST00000561817 TNFRSF10AO00220 468 aa7.47□□□□□ -1.21
CAPN3-210ENST00000561817 MPHOSPH10O00566 681 aaKnown RBP7.47□□□□□ -1.21
CAPN3-210ENST00000561817 DDNO94850 711 aaPredicted RBP7.47□□□□□ -1.21
CAPN3-210ENST00000561817 GH2P01242 217 aa7.47□□□□□ -1.21
CAPN3-210ENST00000561817 PFKFB1P16118 471 aa7.47□□□□□ -1.21
CAPN3-210ENST00000561817 NLRP5P59047 1200 aa7.47□□□□□ -1.21
CAPN3-210ENST00000561817 ATP2C1P98194 919 aaPredicted RBP7.47□□□□□ -1.21
CAPN3-210ENST00000561817 ICA1Q05084 483 aa7.47□□□□□ -1.21
CAPN3-210ENST00000561817 GNL2Q13823 731 aaKnown RBP7.47□□□□□ -1.21
CAPN3-210ENST00000561817 CAMK4Q16566 473 aa7.47□□□□□ -1.21
CAPN3-210ENST00000561817 MAP3K11Q16584 847 aa7.47□□□□□ -1.21
CAPN3-210ENST00000561817 KIAA1755Q5JYT7 1200 aa7.47□□□□□ -1.21
CAPN3-210ENST00000561817 GPATCH4Q5T3I0 446 aaKnown RBP7.47□□□□□ -1.21
CAPN3-210ENST00000561817 SLFN13Q68D06 897 aa7.47□□□□□ -1.21
CAPN3-210ENST00000561817 BTNL9Q6UXG8 535 aa7.47□□□□□ -1.21
CAPN3-210ENST00000561817 ADGRF4Q8IZF3 695 aa7.47□□□□□ -1.21
CAPN3-210ENST00000561817 RRP36Q96EU6 259 aaKnown RBP7.47□□□□□ -1.21
CAPN3-210ENST00000561817 POM121Q96HA1 1249 aa7.47□□□□□ -1.21
CAPN3-210ENST00000561817 XPO5Q9HAV4 1204 aaKnown RBP eCLIP7.47□□□□□ -1.21
CAPN3-210ENST00000561817 GPCPD1Q9NPB8 672 aa7.47□□□□□ -1.21
CAPN3-210ENST00000561817 NMRK2Q9NPI5 230 aa7.47□□□□□ -1.21
CAPN3-210ENST00000561817 TMOD2Q9NZR1 351 aa7.47□□□□□ -1.21
CAPN3-210ENST00000561817 MRVI1Q9Y6F6 885 aa7.47□□□□□ -1.21
CAPN3-210ENST00000561817 POLR2AP24928 1970 aaKnown RBP7.46□□□□□ -1.21
CAPN3-210ENST00000561817 PNMA6FA0A0J9YX94 578 aa7.46□□□□□ -1.22
CAPN3-210ENST00000561817 RBM47A0AV96 593 aaKnown RBP7.46□□□□□ -1.22
CAPN3-210ENST00000561817 FAM187AA6NFU0 413 aa7.46□□□□□ -1.22
CAPN3-210ENST00000561817 USP17L10C9JJH3 530 aa7.46□□□□□ -1.22
CAPN3-210ENST00000561817 F5H6K3 240 aa7.46□□□□□ -1.22
CAPN3-210ENST00000561817 hCG_1984214I3L0E3 225 aa7.46□□□□□ -1.22
CAPN3-210ENST00000561817 CTAGE5O15320 804 aa7.46□□□□□ -1.22
CAPN3-210ENST00000561817 ZNF202O95125 648 aa7.46□□□□□ -1.22
CAPN3-210ENST00000561817 NDUFB10O96000 172 aa7.46□□□□□ -1.22
CAPN3-210ENST00000561817 LMOD1P29536 600 aaPredicted RBP7.46□□□□□ -1.22
CAPN3-210ENST00000561817 RPIAP49247 311 aa7.46□□□□□ -1.22
CAPN3-210ENST00000561817 TYRO3Q06418 890 aa7.46□□□□□ -1.22
CAPN3-210ENST00000561817 KLRC3Q07444 240 aa7.46□□□□□ -1.22
CAPN3-210ENST00000561817 RASA3Q14644 834 aa7.46□□□□□ -1.22
CAPN3-210ENST00000561817 IL17AQ16552 155 aa7.46□□□□□ -1.22
CAPN3-210ENST00000561817 EAPPQ56P03 285 aaPredicted RBP7.46□□□□□ -1.22
CAPN3-210ENST00000561817 TTC38Q5R3I4 469 aa7.46□□□□□ -1.22
CAPN3-210ENST00000561817 CCDC73Q6ZRK6 1079 aa7.46□□□□□ -1.22
CAPN3-210ENST00000561817 PIK3AP1Q6ZUJ8 805 aa7.46□□□□□ -1.22
CAPN3-210ENST00000561817 KCTD1Q719H9 257 aa7.46□□□□□ -1.22
CAPN3-210ENST00000561817 SND1Q7KZF4 910 aaKnown RBP eCLIP7.46□□□□□ -1.22
CAPN3-210ENST00000561817 HEATR3Q7Z4Q2 680 aa7.46□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms