RNA–Protein interactions for RNA: ENST00000560983.1

HERC1-211, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 457 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-211ENST00000560983 ARMCX6Q7L4S7 300 aa5.38□□□□□ -1.55
HERC1-211ENST00000560983 ASB11Q8WXH4 323 aa5.38□□□□□ -1.55
HERC1-211ENST00000560983 RAPGEF4Q8WZA2 1011 aa5.38□□□□□ -1.55
HERC1-211ENST00000560983 FRMD6Q96NE9 622 aa5.38□□□□□ -1.55
HERC1-211ENST00000560983 PCDHA4Q9UN74 947 aa5.38□□□□□ -1.55
HERC1-211ENST00000560983 SPG7Q9UQ90 795 aa5.38□□□□□ -1.55
HERC1-211ENST00000560983 CSADQ9Y600 493 aa5.38□□□□□ -1.55
HERC1-211ENST00000560983 IVNS1ABPQ9Y6Y0 642 aa5.38□□□□□ -1.55
HERC1-211ENST00000560983 CNTNAP4Q9C0A0 1308 aa5.38□□□□□ -1.55
HERC1-211ENST00000560983 USP42Q9H9J4 1324 aaKnown RBP5.38□□□□□ -1.55
HERC1-211ENST00000560983 LTBP3Q9NS15 1303 aa5.38□□□□□ -1.55
HERC1-211ENST00000560983 SPTBN5Q9NRC6 3674 aaKnown RBP5.38□□□□□ -1.55
HERC1-211ENST00000560983 THSD7BQ9C0I4 1608 aa5.37□□□□□ -1.55
HERC1-211ENST00000560983 RANBP2P49792 3224 aaKnown RBP5.37□□□□□ -1.55
HERC1-211ENST00000560983 TAF1LQ8IZX4 1826 aa5.37□□□□□ -1.55
HERC1-211ENST00000560983 H0YIN7 160 aa5.37□□□□□ -1.55
HERC1-211ENST00000560983 P4HBP07237 508 aaKnown RBP5.37□□□□□ -1.55
HERC1-211ENST00000560983 USP17L7P0C7H9 530 aa5.37□□□□□ -1.55
HERC1-211ENST00000560983 ZNF865P0CJ78 1059 aaPredicted RBP5.37□□□□□ -1.55
HERC1-211ENST00000560983 ITIH2P19823 946 aa5.37□□□□□ -1.55
HERC1-211ENST00000560983 SLBPQ14493 270 aaKnown RBP eCLIP5.37□□□□□ -1.55
HERC1-211ENST00000560983 NFIXQ14938 502 aa5.37□□□□□ -1.55
HERC1-211ENST00000560983 SV2BQ7L1I2 683 aa5.37□□□□□ -1.55
HERC1-211ENST00000560983 ZNF507Q8TCN5 953 aa5.37□□□□□ -1.55
HERC1-211ENST00000560983 HHIPL1Q96JK4 782 aa5.37□□□□□ -1.55
HERC1-211ENST00000560983 KRTAP4-7Q9BYR0 210 aa5.37□□□□□ -1.55
HERC1-211ENST00000560983 TAOK3Q9H2K8 898 aa5.37□□□□□ -1.55
HERC1-211ENST00000560983 SEMA3GQ9NS98 782 aa5.37□□□□□ -1.55
HERC1-211ENST00000560983 TMOD3Q9NYL9 352 aa5.37□□□□□ -1.55
HERC1-211ENST00000560983 EVC2Q86UK5 1308 aa5.37□□□□□ -1.55
HERC1-211ENST00000560983 ZNF541Q9H0D2 1346 aa5.37□□□□□ -1.55
HERC1-211ENST00000560983 KDRP35968 1356 aa5.37□□□□□ -1.55
HERC1-211ENST00000560983 MESP2Q0VG99 397 aa5.36□□□□□ -1.55
HERC1-211ENST00000560983 WNT10AQ9GZT5 417 aa5.36□□□□□ -1.55
HERC1-211ENST00000560983 FBRSQ9HAH7 460 aa5.36□□□□□ -1.55
HERC1-211ENST00000560983 LMCD1Q9NZU5 365 aa5.36□□□□□ -1.55
HERC1-211ENST00000560983 CTNND2Q9UQB3 1225 aa5.36□□□□□ -1.55
HERC1-211ENST00000560983 SNCAIPQ9Y6H5 919 aa5.36□□□□□ -1.55
HERC1-211ENST00000560983 RNF123Q5XPI4 1314 aa5.36□□□□□ -1.55
HERC1-211ENST00000560983 INSRP06213 1382 aa5.36□□□□□ -1.55
HERC1-211ENST00000560983 MAP2P11137 1827 aaKnown RBP5.36□□□□□ -1.55
HERC1-211ENST00000560983 UNC80Q8N2C7 3258 aa5.36□□□□□ -1.55
HERC1-211ENST00000560983 LAMA3Q16787 3333 aa5.36□□□□□ -1.55
HERC1-211ENST00000560983 FAM208AQ9UK61 1670 aaKnown RBP5.35□□□□□ -1.55
HERC1-211ENST00000560983 IQCJ-SCHIP1C9J366 451 aaPredicted RBP5.35□□□□□ -1.55
HERC1-211ENST00000560983 FZD9O00144 591 aa5.35□□□□□ -1.55
HERC1-211ENST00000560983 SERPINB2P05120 415 aa5.35□□□□□ -1.55
HERC1-211ENST00000560983 AMPHP49418 695 aa5.35□□□□□ -1.55
HERC1-211ENST00000560983 RPS26P62854 115 aaKnown RBP5.35□□□□□ -1.55
HERC1-211ENST00000560983 ATP2B2Q01814 1243 aa5.35□□□□□ -1.55
HERC1-211ENST00000560983 ZNF648Q5T619 568 aaPredicted RBP5.35□□□□□ -1.55
HERC1-211ENST00000560983 CTU1Q7Z7A3 348 aaKnown RBP5.35□□□□□ -1.55
HERC1-211ENST00000560983 CILP2Q8IUL8 1156 aa5.35□□□□□ -1.55
HERC1-211ENST00000560983 BHLHE22Q8NFJ8 381 aaPredicted RBP5.35□□□□□ -1.55
HERC1-211ENST00000560983 ZNF622Q969S3 477 aaKnown RBP eCLIP5.35□□□□□ -1.55
HERC1-211ENST00000560983 PLPPR2Q96GM1 343 aa5.35□□□□□ -1.55
HERC1-211ENST00000560983 FOXQ1Q9C009 403 aa5.35□□□□□ -1.55
HERC1-211ENST00000560983 PRDM5Q9NQX1 630 aaPredicted RBP5.35□□□□□ -1.55
HERC1-211ENST00000560983 RNF186Q9NXI6 227 aa5.35□□□□□ -1.55
HERC1-211ENST00000560983 SAGE1Q9NXZ1 904 aa5.35□□□□□ -1.55
HERC1-211ENST00000560983 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP5.35□□□□□ -1.55
HERC1-211ENST00000560983 TACC3Q9Y6A5 838 aa5.35□□□□□ -1.55
HERC1-211ENST00000560983 ADAMTSL1Q8N6G6 1762 aa5.34□□□□□ -1.55
HERC1-211ENST00000560983 SMG6Q86US8 1419 aaKnown RBP5.34□□□□□ -1.55
HERC1-211ENST00000560983 CARMIL3Q8ND23 1372 aa5.34□□□□□ -1.55
HERC1-211ENST00000560983 ZNF503-AS2A6NEH8 195 aa5.34□□□□□ -1.55
HERC1-211ENST00000560983 FAM155AB1AL88 458 aaPredicted RBP5.34□□□□□ -1.55
HERC1-211ENST00000560983 FARP2O94887 1054 aaPredicted RBP5.34□□□□□ -1.55
HERC1-211ENST00000560983 CRKLP46109 303 aaKnown RBP5.34□□□□□ -1.55
HERC1-211ENST00000560983 ZP2Q05996 745 aa5.34□□□□□ -1.55
HERC1-211ENST00000560983 NOGQ13253 232 aa5.34□□□□□ -1.55
HERC1-211ENST00000560983 IKZF1Q13422 519 aa5.34□□□□□ -1.55
HERC1-211ENST00000560983 NKG7Q16617 165 aa5.34□□□□□ -1.55
HERC1-211ENST00000560983 PDZRN4Q6ZMN7 1036 aaPredicted RBP5.34□□□□□ -1.55
HERC1-211ENST00000560983 CDC37L1Q7L3B6 337 aa5.34□□□□□ -1.55
HERC1-211ENST00000560983 MFSD2AQ8NA29 543 aa5.34□□□□□ -1.55
HERC1-211ENST00000560983 ELMO3Q96BJ8 720 aa5.34□□□□□ -1.55
HERC1-211ENST00000560983 PRDM7Q9NQW5 492 aa5.34□□□□□ -1.55
HERC1-211ENST00000560983 ST14Q9Y5Y6 855 aa5.34□□□□□ -1.55
HERC1-211ENST00000560983 CASP8AP2Q9UKL3 1982 aa5.34□□□□□ -1.55
HERC1-211ENST00000560983 ADAMTS7Q9UKP4 1686 aa5.34□□□□□ -1.56
HERC1-211ENST00000560983 CENPFP49454 3210 aa5.33□□□□□ -1.56
HERC1-211ENST00000560983 DBX1A6NMT0 343 aa5.33□□□□□ -1.56
HERC1-211ENST00000560983 GNAT3A8MTJ3 354 aa5.33□□□□□ -1.56
HERC1-211ENST00000560983 PRR33A8MZF0 331 aa5.33□□□□□ -1.56
HERC1-211ENST00000560983 GFRA2O00451 464 aa5.33□□□□□ -1.56
HERC1-211ENST00000560983 CELF2O95319 508 aaKnown RBP5.33□□□□□ -1.56
HERC1-211ENST00000560983 LDHBP07195 334 aaKnown RBP5.33□□□□□ -1.56
HERC1-211ENST00000560983 GNA15P30679 374 aa5.33□□□□□ -1.56
HERC1-211ENST00000560983 EPS15P42566 896 aa5.33□□□□□ -1.56
HERC1-211ENST00000560983 RRS1Q15050 365 aaKnown RBP5.33□□□□□ -1.56
HERC1-211ENST00000560983 PKN2Q16513 984 aaKnown RBP5.33□□□□□ -1.56
HERC1-211ENST00000560983 HSP90AB2PQ58FF8 381 aa5.33□□□□□ -1.56
HERC1-211ENST00000560983 HDXQ7Z353 690 aa5.33□□□□□ -1.56
HERC1-211ENST00000560983 ZSWIM9Q86XI8 627 aa5.33□□□□□ -1.56
HERC1-211ENST00000560983 GPC2Q8N158 579 aa5.33□□□□□ -1.56
HERC1-211ENST00000560983 SLC12A5Q9H2X9 1139 aa5.33□□□□□ -1.56
HERC1-211ENST00000560983 C19orf73Q9NVV2 129 aa5.33□□□□□ -1.56
HERC1-211ENST00000560983 TIMELESSQ9UNS1 1208 aa5.33□□□□□ -1.56
HERC1-211ENST00000560983 CAPN6Q9Y6Q1 641 aa5.33□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms