RNA–Protein interactions for RNA: ENST00000560828.5

CPNE6-217, Transcript of copine 6, humanhuman

TSL 4

Gene CPNE6, Length 589 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE6-217ENST00000560828 CABYRO75952 493 aa19.7■□□□□ 0.74
CPNE6-217ENST00000560828 PARP1P09874 1014 aaKnown RBP19.7■□□□□ 0.74
CPNE6-217ENST00000560828 BEX3Q00994 111 aa19.7■□□□□ 0.74
CPNE6-217ENST00000560828 CDC37Q16543 378 aaPredicted RBP19.7■□□□□ 0.74
CPNE6-217ENST00000560828 USH1GQ495M9 461 aa19.7■□□□□ 0.74
CPNE6-217ENST00000560828 IFIT1BQ5T764 474 aaKnown RBP19.7■□□□□ 0.74
CPNE6-217ENST00000560828 ADGRF4Q8IZF3 695 aa19.7■□□□□ 0.74
CPNE6-217ENST00000560828 DNERQ8NFT8 737 aa19.7■□□□□ 0.74
CPNE6-217ENST00000560828 VTI1AQ96AJ9 217 aa19.7■□□□□ 0.74
CPNE6-217ENST00000560828 CPVLQ9H3G5 476 aa19.7■□□□□ 0.74
CPNE6-217ENST00000560828 U3KPZ7 1027 aaPredicted RBP19.7■□□□□ 0.74
CPNE6-217ENST00000560828 A0A0C4DFX4 3053 aa19.7■□□□□ 0.74
CPNE6-217ENST00000560828 ARVCFO00192 962 aa19.69■□□□□ 0.74
CPNE6-217ENST00000560828 DLL1O00548 723 aa19.69■□□□□ 0.74
CPNE6-217ENST00000560828 DYNC1LI2O43237 492 aaPredicted RBP19.69■□□□□ 0.74
CPNE6-217ENST00000560828 ZEB2O60315 1214 aa19.69■□□□□ 0.74
CPNE6-217ENST00000560828 EDNRBP24530 442 aa19.69■□□□□ 0.74
CPNE6-217ENST00000560828 TRDNQ13061 729 aa19.69■□□□□ 0.74
CPNE6-217ENST00000560828 SHHQ15465 462 aa19.69■□□□□ 0.74
CPNE6-217ENST00000560828 DUSP28Q4G0W2 176 aa19.69■□□□□ 0.74
CPNE6-217ENST00000560828 C9orf50Q5SZB4 431 aa19.69■□□□□ 0.74
CPNE6-217ENST00000560828 KIAA1211Q6ZU35 1233 aa19.69■□□□□ 0.74
CPNE6-217ENST00000560828 TBX21Q9UL17 535 aa19.69■□□□□ 0.74
CPNE6-217ENST00000560828 ABCB11O95342 1321 aa19.69■□□□□ 0.74
CPNE6-217ENST00000560828 RBM47A0AV96 593 aaKnown RBP19.68■□□□□ 0.74
CPNE6-217ENST00000560828 B4DLN1 442 aa19.68■□□□□ 0.74
CPNE6-217ENST00000560828 SGSM2O43147 1006 aa19.68■□□□□ 0.74
CPNE6-217ENST00000560828 CYP21A2P08686 494 aa19.68■□□□□ 0.74
CPNE6-217ENST00000560828 MRPL12P52815 198 aaKnown RBP19.68■□□□□ 0.74
CPNE6-217ENST00000560828 PTH1RQ03431 593 aa19.68■□□□□ 0.74
CPNE6-217ENST00000560828 FPGSQ05932 587 aa19.68■□□□□ 0.74
CPNE6-217ENST00000560828 SEC23AQ15436 765 aa19.68■□□□□ 0.74
CPNE6-217ENST00000560828 CXCL17Q6UXB2 119 aa19.68■□□□□ 0.74
CPNE6-217ENST00000560828 SEZ6LQ9BYH1 1024 aa19.68■□□□□ 0.74
CPNE6-217ENST00000560828 TLR3O15455 904 aaKnown RBP19.67■□□□□ 0.74
CPNE6-217ENST00000560828 DHX16O60231 1041 aaKnown RBP19.67■□□□□ 0.74
CPNE6-217ENST00000560828 TIMP1P01033 207 aa19.67■□□□□ 0.74
CPNE6-217ENST00000560828 PDE4DQ08499 809 aa19.67■□□□□ 0.74
CPNE6-217ENST00000560828 FAM109BQ6ICB4 259 aaPredicted RBP19.67■□□□□ 0.74
CPNE6-217ENST00000560828 Q7L0L9 218 aa19.67■□□□□ 0.74
CPNE6-217ENST00000560828 CYB5R4Q7L1T6 521 aa19.67■□□□□ 0.74
CPNE6-217ENST00000560828 FAM126BQ8IXS8 530 aa19.67■□□□□ 0.74
CPNE6-217ENST00000560828 SLC43A3Q8NBI5 491 aa19.67■□□□□ 0.74
CPNE6-217ENST00000560828 WDR11Q9BZH6 1224 aa19.67■□□□□ 0.74
CPNE6-217ENST00000560828 MCM3APO60318 1980 aa19.66■□□□□ 0.74
CPNE6-217ENST00000560828 PTGS1P23219 599 aa19.66■□□□□ 0.74
CPNE6-217ENST00000560828 QRICH1Q2TAL8 776 aa19.66■□□□□ 0.74
CPNE6-217ENST00000560828 TMEM63BQ5T3F8 832 aa19.66■□□□□ 0.74
CPNE6-217ENST00000560828 MCF2L2Q86YR7 1114 aa19.66■□□□□ 0.74
CPNE6-217ENST00000560828 JMJD4Q9H9V9 463 aa19.66■□□□□ 0.74
CPNE6-217ENST00000560828 MTMR10Q9NXD2 777 aa19.66■□□□□ 0.74
CPNE6-217ENST00000560828 LCTP09848 1927 aa19.65■□□□□ 0.74
CPNE6-217ENST00000560828 EPHB4P54760 987 aa19.65■□□□□ 0.74
CPNE6-217ENST00000560828 MFSD5Q6N075 450 aa19.65■□□□□ 0.74
CPNE6-217ENST00000560828 RALYLQ86SE5 291 aaKnown RBP19.65■□□□□ 0.74
CPNE6-217ENST00000560828 FBXO11Q86XK2 927 aa19.65■□□□□ 0.74
CPNE6-217ENST00000560828 SCFD2Q8WU76 684 aa19.65■□□□□ 0.74
CPNE6-217ENST00000560828 MRPL11Q9Y3B7 192 aaKnown RBP19.65■□□□□ 0.74
CPNE6-217ENST00000560828 LAMA2P24043 3122 aaKnown RBP19.65■□□□□ 0.74
CPNE6-217ENST00000560828 UNC80Q8N2C7 3258 aa19.64■□□□□ 0.73
CPNE6-217ENST00000560828 KLRF2D3W0D1 207 aa19.64■□□□□ 0.73
CPNE6-217ENST00000560828 E7EWF7 191 aa19.64■□□□□ 0.73
CPNE6-217ENST00000560828 NKRFO15226 690 aaKnown RBP eCLIP19.64■□□□□ 0.73
CPNE6-217ENST00000560828 CD4P01730 458 aa19.64■□□□□ 0.73
CPNE6-217ENST00000560828 CPT1AP50416 773 aa19.64■□□□□ 0.73
CPNE6-217ENST00000560828 ITGA7Q13683 1181 aa19.64■□□□□ 0.73
CPNE6-217ENST00000560828 PPP2R5BQ15173 497 aa19.64■□□□□ 0.73
CPNE6-217ENST00000560828 STAG2Q8N3U4 1231 aa19.64■□□□□ 0.73
CPNE6-217ENST00000560828 NCOA7Q8NI08 942 aa19.64■□□□□ 0.73
CPNE6-217ENST00000560828 MAP4K1Q92918 833 aa19.64■□□□□ 0.73
CPNE6-217ENST00000560828 RNPC3Q96LT9 517 aaKnown RBP19.64■□□□□ 0.73
CPNE6-217ENST00000560828 VAT1LQ9HCJ6 419 aa19.64■□□□□ 0.73
CPNE6-217ENST00000560828 MAD2L2Q9UI95 211 aa19.64■□□□□ 0.73
CPNE6-217ENST00000560828 GRIN2DO15399 1336 aa19.63■□□□□ 0.73
CPNE6-217ENST00000560828 ERICH2A1L162 156 aa19.63■□□□□ 0.73
CPNE6-217ENST00000560828 SMAD3P84022 425 aaKnown RBP19.63■□□□□ 0.73
CPNE6-217ENST00000560828 SART3Q15020 963 aaKnown RBP19.63■□□□□ 0.73
CPNE6-217ENST00000560828 SYTL5Q8TDW5 730 aaPredicted RBP19.63■□□□□ 0.73
CPNE6-217ENST00000560828 NSUN6Q8TEA1 469 aaKnown RBP19.63■□□□□ 0.73
CPNE6-217ENST00000560828 AMNQ9BXJ7 453 aa19.63■□□□□ 0.73
CPNE6-217ENST00000560828 POLR3EQ9NVU0 708 aa19.63■□□□□ 0.73
CPNE6-217ENST00000560828 STXBP5LQ9Y2K9 1186 aa19.63■□□□□ 0.73
CPNE6-217ENST00000560828 PALM3A6NDB9 673 aaPredicted RBP19.62■□□□□ 0.73
CPNE6-217ENST00000560828 IFIT3O14879 490 aaKnown RBP19.62■□□□□ 0.73
CPNE6-217ENST00000560828 BRDTQ58F21 947 aaPredicted RBP19.62■□□□□ 0.73
CPNE6-217ENST00000560828 TMEM199Q8N511 208 aa19.62■□□□□ 0.73
CPNE6-217ENST00000560828 OR6J1Q8NGC5 347 aa19.62■□□□□ 0.73
CPNE6-217ENST00000560828 TBC1D5Q92609 795 aa19.62■□□□□ 0.73
CPNE6-217ENST00000560828 MTMR8Q96EF0 704 aa19.62■□□□□ 0.73
CPNE6-217ENST00000560828 TAF6LQ9Y6J9 622 aa19.62■□□□□ 0.73
CPNE6-217ENST00000560828 ZBTB5O15062 677 aa19.61■□□□□ 0.73
CPNE6-217ENST00000560828 PURAQ00577 322 aaKnown RBP19.61■□□□□ 0.73
CPNE6-217ENST00000560828 GHRHRQ02643 423 aa19.61■□□□□ 0.73
CPNE6-217ENST00000560828 PPIGQ13427 754 aaKnown RBP eCLIP19.61■□□□□ 0.73
CPNE6-217ENST00000560828 TTLL4Q14679 1199 aa19.61■□□□□ 0.73
CPNE6-217ENST00000560828 GRM4Q14833 912 aa19.61■□□□□ 0.73
CPNE6-217ENST00000560828 ZNF697Q5TEC3 545 aa19.61■□□□□ 0.73
CPNE6-217ENST00000560828 STOX1Q6ZVD7 989 aa19.61■□□□□ 0.73
CPNE6-217ENST00000560828 IWS1Q96ST2 819 aa19.61■□□□□ 0.73
CPNE6-217ENST00000560828 COL20A1Q9P218 1284 aa19.61■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms