RNA–Protein interactions for RNA: ENST00000560603.5

MARK3-221, Transcript of microtubule affinity regulating kinase 3, humanhuman

TSL 4

Gene MARK3, Length 572 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MARK3-221ENST00000560603 WNT8AQ9H1J5 351 aa14.25□□□□□ -0.13
MARK3-221ENST00000560603 PNMA2Q9UL42 364 aa14.25□□□□□ -0.13
MARK3-221ENST00000560603 RAD50Q92878 1312 aa14.24□□□□□ -0.13
MARK3-221ENST00000560603 RABGGTBP53611 331 aa14.24□□□□□ -0.13
MARK3-221ENST00000560603 TMEM67Q5HYA8 995 aa14.24□□□□□ -0.13
MARK3-221ENST00000560603 SCLYQ96I15 445 aa14.24□□□□□ -0.13
MARK3-221ENST00000560603 WDR11Q9BZH6 1224 aa14.24□□□□□ -0.13
MARK3-221ENST00000560603 MTMR7Q9Y216 660 aa14.24□□□□□ -0.13
MARK3-221ENST00000560603 TNKSO95271 1327 aa14.23□□□□□ -0.13
MARK3-221ENST00000560603 RANBP6O60518 1105 aaKnown RBP14.23□□□□□ -0.13
MARK3-221ENST00000560603 KPNA6O60684 536 aa14.23□□□□□ -0.13
MARK3-221ENST00000560603 RFC2P35250 354 aa14.23□□□□□ -0.13
MARK3-221ENST00000560603 SNAP25P60880 206 aa14.23□□□□□ -0.13
MARK3-221ENST00000560603 SKIV2LQ15477 1246 aaKnown RBP14.23□□□□□ -0.13
MARK3-221ENST00000560603 FAM47CQ5HY64 1035 aa14.23□□□□□ -0.13
MARK3-221ENST00000560603 ZMYM1Q5SVZ6 1142 aa14.23□□□□□ -0.13
MARK3-221ENST00000560603 RETREG2Q8NC44 543 aa14.23□□□□□ -0.13
MARK3-221ENST00000560603 SEC62Q99442 399 aaKnown RBP14.23□□□□□ -0.13
MARK3-221ENST00000560603 MTG1Q9BT17 334 aaPredicted RBP14.23□□□□□ -0.13
MARK3-221ENST00000560603 DDX52Q9Y2R4 599 aaKnown RBP eCLIP14.23□□□□□ -0.13
MARK3-221ENST00000560603 PRRC2BQ5JSZ5 2229 aaKnown RBP14.22□□□□□ -0.13
MARK3-221ENST00000560603 B4DLN1 442 aa14.22□□□□□ -0.13
MARK3-221ENST00000560603 NKRFO15226 690 aaKnown RBP eCLIP14.22□□□□□ -0.13
MARK3-221ENST00000560603 MYL3P08590 195 aa14.22□□□□□ -0.13
MARK3-221ENST00000560603 PTGS1P23219 599 aa14.22□□□□□ -0.13
MARK3-221ENST00000560603 ALDH5A1P51649 535 aaPredicted RBP14.22□□□□□ -0.13
MARK3-221ENST00000560603 MRPL12P52815 198 aaKnown RBP14.22□□□□□ -0.13
MARK3-221ENST00000560603 PURAQ00577 322 aaKnown RBP14.22□□□□□ -0.13
MARK3-221ENST00000560603 BAATQ14032 418 aaPredicted RBP14.22□□□□□ -0.13
MARK3-221ENST00000560603 SYDE2Q5VT97 1194 aa14.22□□□□□ -0.13
MARK3-221ENST00000560603 DEFB128Q7Z7B8 93 aa14.22□□□□□ -0.13
MARK3-221ENST00000560603 OR6J1Q8NGC5 347 aa14.22□□□□□ -0.13
MARK3-221ENST00000560603 PHOSPHO2Q8TCD6 241 aa14.22□□□□□ -0.13
MARK3-221ENST00000560603 SLC9A7Q96T83 725 aa14.22□□□□□ -0.13
MARK3-221ENST00000560603 C1QTNF1Q9BXJ1 281 aa14.22□□□□□ -0.13
MARK3-221ENST00000560603 RANBP17Q9H2T7 1088 aaKnown RBP14.22□□□□□ -0.13
MARK3-221ENST00000560603 TRMT13Q9NUP7 481 aaKnown RBP14.22□□□□□ -0.13
MARK3-221ENST00000560603 GBF1Q92538 1859 aa14.22□□□□□ -0.13
MARK3-221ENST00000560603 LRRC37A2A6NM11 1700 aa14.21□□□□□ -0.13
MARK3-221ENST00000560603 XIRP2A4UGR9 3374 aa14.21□□□□□ -0.13
MARK3-221ENST00000560603 RBM47A0AV96 593 aaKnown RBP14.21□□□□□ -0.13
MARK3-221ENST00000560603 PTPDC1A2A3K4 754 aa14.21□□□□□ -0.13
MARK3-221ENST00000560603 KIF28PB7ZC32 967 aa14.21□□□□□ -0.13
MARK3-221ENST00000560603 CYP2C9P11712 490 aa14.21□□□□□ -0.13
MARK3-221ENST00000560603 MYOGP15173 224 aa14.21□□□□□ -0.13
MARK3-221ENST00000560603 POU3F3P20264 500 aaPredicted RBP14.21□□□□□ -0.13
MARK3-221ENST00000560603 CTDSPL2Q05D32 466 aa14.21□□□□□ -0.13
MARK3-221ENST00000560603 PDE4DQ08499 809 aa14.21□□□□□ -0.13
MARK3-221ENST00000560603 TTLL4Q14679 1199 aa14.21□□□□□ -0.13
MARK3-221ENST00000560603 PPP2R5BQ15173 497 aa14.21□□□□□ -0.13
MARK3-221ENST00000560603 C20orf194Q5TEA3 1177 aa14.21□□□□□ -0.13
MARK3-221ENST00000560603 BTNL9Q6UXG8 535 aa14.21□□□□□ -0.13
MARK3-221ENST00000560603 IL17RBQ9NRM6 502 aa14.21□□□□□ -0.13
MARK3-221ENST00000560603 ZBTB47Q9UFB7 747 aaPredicted RBP14.21□□□□□ -0.13
MARK3-221ENST00000560603 ANAPC4Q9UJX5 808 aa14.21□□□□□ -0.13
MARK3-221ENST00000560603 NOD1Q9Y239 953 aa14.21□□□□□ -0.13
MARK3-221ENST00000560603 DDX49Q9Y6V7 483 aaKnown RBP14.21□□□□□ -0.13
MARK3-221ENST00000560603 PITPNM1O00562 1244 aa14.2□□□□□ -0.14
MARK3-221ENST00000560603 ORC4O43929 436 aa14.2□□□□□ -0.14
MARK3-221ENST00000560603 NMT2O60551 498 aa14.2□□□□□ -0.14
MARK3-221ENST00000560603 TOP1P11387 765 aaKnown RBP14.2□□□□□ -0.14
MARK3-221ENST00000560603 NOVP48745 357 aa14.2□□□□□ -0.14
MARK3-221ENST00000560603 PTPN11Q06124 597 aaPredicted RBP14.2□□□□□ -0.14
MARK3-221ENST00000560603 BFSP2Q13515 415 aa14.2□□□□□ -0.14
MARK3-221ENST00000560603 NBPF20Q3BBV1 942 aa14.2□□□□□ -0.14
MARK3-221ENST00000560603 TMEM63BQ5T3F8 832 aa14.2□□□□□ -0.14
MARK3-221ENST00000560603 NFRKBQ6P4R8 1299 aa14.2□□□□□ -0.14
MARK3-221ENST00000560603 PI4K2BQ8TCG2 481 aa14.2□□□□□ -0.14
MARK3-221ENST00000560603 SCFD2Q8WU76 684 aa14.2□□□□□ -0.14
MARK3-221ENST00000560603 FTOQ9C0B1 505 aaKnown RBP eCLIP14.2□□□□□ -0.14
MARK3-221ENST00000560603 TOMM22Q9NS69 142 aa14.2□□□□□ -0.14
MARK3-221ENST00000560603 COG5Q9UP83 839 aa14.2□□□□□ -0.14
MARK3-221ENST00000560603 REV3LO60673 3130 aa14.2□□□□□ -0.14
MARK3-221ENST00000560603 NFIBO00712 420 aa14.19□□□□□ -0.14
MARK3-221ENST00000560603 CA3P07451 260 aa14.19□□□□□ -0.14
MARK3-221ENST00000560603 BMP1P13497 986 aa14.19□□□□□ -0.14
MARK3-221ENST00000560603 CALML3P27482 149 aa14.19□□□□□ -0.14
MARK3-221ENST00000560603 SLC16A2P36021 539 aa14.19□□□□□ -0.14
MARK3-221ENST00000560603 RNF207Q6ZRF8 634 aa14.19□□□□□ -0.14
MARK3-221ENST00000560603 CCDC155Q8N6L0 562 aa14.19□□□□□ -0.14
MARK3-221ENST00000560603 DNERQ8NFT8 737 aa14.19□□□□□ -0.14
MARK3-221ENST00000560603 VWCEQ96DN2 955 aa14.19□□□□□ -0.14
MARK3-221ENST00000560603 FAM122AQ96E09 287 aa14.19□□□□□ -0.14
MARK3-221ENST00000560603 PURBQ96QR8 312 aaKnown RBP14.19□□□□□ -0.14
MARK3-221ENST00000560603 MTCH2Q9Y6C9 303 aa14.19□□□□□ -0.14
MARK3-221ENST00000560603 A6NJR5 290 aa14.18□□□□□ -0.14
MARK3-221ENST00000560603 IQCF3P0C7M6 154 aa14.18□□□□□ -0.14
MARK3-221ENST00000560603 MX1P20591 662 aa14.18□□□□□ -0.14
MARK3-221ENST00000560603 ALX1Q15699 326 aa14.18□□□□□ -0.14
MARK3-221ENST00000560603 TTBK2Q6IQ55 1244 aa14.18□□□□□ -0.14
MARK3-221ENST00000560603 GPCPD1Q9NPB8 672 aa14.18□□□□□ -0.14
MARK3-221ENST00000560603 INCENPQ9NQS7 918 aa14.18□□□□□ -0.14
MARK3-221ENST00000560603 TCF20Q9UGU0 1960 aaKnown RBP14.17□□□□□ -0.14
MARK3-221ENST00000560603 SCN10AQ9Y5Y9 1956 aa14.17□□□□□ -0.14
MARK3-221ENST00000560603 BAIAP3O94812 1187 aa14.17□□□□□ -0.14
MARK3-221ENST00000560603 PLA2G5P39877 138 aa14.17□□□□□ -0.14
MARK3-221ENST00000560603 KCNJ6P48051 423 aa14.17□□□□□ -0.14
MARK3-221ENST00000560603 TFF2Q03403 129 aa14.17□□□□□ -0.14
MARK3-221ENST00000560603 RRP12Q5JTH9 1297 aaKnown RBP14.17□□□□□ -0.14
MARK3-221ENST00000560603 SLC30A10Q6XR72 485 aa14.17□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms