RNA–Protein interactions for RNA: ENST00000560521.5

RABGGTA-217, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 3

Gene RABGGTA, Length 680 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-217ENST00000560521 TRIOO75962 3097 aa10.69□□□□□ -0.7
RABGGTA-217ENST00000560521 TECTAO75443 2155 aa10.69□□□□□ -0.7
RABGGTA-217ENST00000560521 USP34Q70CQ2 3546 aa10.69□□□□□ -0.7
RABGGTA-217ENST00000560521 POTEB3A0JP26 581 aa10.69□□□□□ -0.7
RABGGTA-217ENST00000560521 ZNF316A6NFI3 1004 aaPredicted RBP10.69□□□□□ -0.7
RABGGTA-217ENST00000560521 TMEM232C9JQI7 657 aa10.69□□□□□ -0.7
RABGGTA-217ENST00000560521 RBAK-RBAKDNI3L0D1 243 aa10.69□□□□□ -0.7
RABGGTA-217ENST00000560521 PITPNM1O00562 1244 aa10.69□□□□□ -0.7
RABGGTA-217ENST00000560521 BAIAP3O94812 1187 aa10.69□□□□□ -0.7
RABGGTA-217ENST00000560521 MYL3P08590 195 aa10.69□□□□□ -0.7
RABGGTA-217ENST00000560521 FDX1P10109 184 aa10.69□□□□□ -0.7
RABGGTA-217ENST00000560521 RLBP1P12271 317 aa10.69□□□□□ -0.7
RABGGTA-217ENST00000560521 BMP3P12645 472 aa10.69□□□□□ -0.7
RABGGTA-217ENST00000560521 ALADP13716 330 aa10.69□□□□□ -0.7
RABGGTA-217ENST00000560521 SSTR3P32745 418 aaPredicted RBP10.69□□□□□ -0.7
RABGGTA-217ENST00000560521 GPNMBQ14956 572 aa10.69□□□□□ -0.7
RABGGTA-217ENST00000560521 MUM1L1Q5H9M0 696 aa10.69□□□□□ -0.7
RABGGTA-217ENST00000560521 SLFN13Q68D06 897 aa10.69□□□□□ -0.7
RABGGTA-217ENST00000560521 POTEBQ6S5H4 581 aa10.69□□□□□ -0.7
RABGGTA-217ENST00000560521 ITPRIPQ8IWB1 547 aa10.69□□□□□ -0.7
RABGGTA-217ENST00000560521 LRRC47Q8N1G4 583 aaKnown RBP10.69□□□□□ -0.7
RABGGTA-217ENST00000560521 CLASRPQ8N2M8 674 aaKnown RBP10.69□□□□□ -0.7
RABGGTA-217ENST00000560521 RETREG2Q8NC44 543 aa10.69□□□□□ -0.7
RABGGTA-217ENST00000560521 MORC4Q8TE76 937 aa10.69□□□□□ -0.7
RABGGTA-217ENST00000560521 CEP95Q96GE4 821 aa10.69□□□□□ -0.7
RABGGTA-217ENST00000560521 VTA1Q9NP79 307 aa10.69□□□□□ -0.7
RABGGTA-217ENST00000560521 MTMR4Q9NYA4 1195 aa10.69□□□□□ -0.7
RABGGTA-217ENST00000560521 KAT6AQ92794 2004 aa10.68□□□□□ -0.7
RABGGTA-217ENST00000560521 KMT2EQ8IZD2 1858 aa10.68□□□□□ -0.7
RABGGTA-217ENST00000560521 GRXCR2A6NFK2 248 aa10.68□□□□□ -0.7
RABGGTA-217ENST00000560521 GSG1L2A8MUP6 293 aa10.68□□□□□ -0.7
RABGGTA-217ENST00000560521 MINDY4BA8MYZ0 360 aa10.68□□□□□ -0.7
RABGGTA-217ENST00000560521 IFIT2P09913 472 aaKnown RBP10.68□□□□□ -0.7
RABGGTA-217ENST00000560521 ALAS1P13196 640 aa10.68□□□□□ -0.7
RABGGTA-217ENST00000560521 KCNA5P22460 613 aa10.68□□□□□ -0.7
RABGGTA-217ENST00000560521 ERVK-21P61565 698 aa10.68□□□□□ -0.7
RABGGTA-217ENST00000560521 WDR5P61964 334 aaKnown RBP10.68□□□□□ -0.7
RABGGTA-217ENST00000560521 CSPP1Q1MSJ5 1256 aa10.68□□□□□ -0.7
RABGGTA-217ENST00000560521 TKFCQ3LXA3 575 aa10.68□□□□□ -0.7
RABGGTA-217ENST00000560521 FAM47CQ5HY64 1035 aa10.68□□□□□ -0.7
RABGGTA-217ENST00000560521 PTCRAQ6ISU1 281 aaPredicted RBP10.68□□□□□ -0.7
RABGGTA-217ENST00000560521 RPAP2Q8IXW5 612 aaPredicted RBP10.68□□□□□ -0.7
RABGGTA-217ENST00000560521 GMCL1P1Q8NEA9 526 aa10.68□□□□□ -0.7
RABGGTA-217ENST00000560521 ANKS1AQ92625 1134 aa10.68□□□□□ -0.7
RABGGTA-217ENST00000560521 STRBPQ96SI9 672 aaKnown RBP10.68□□□□□ -0.7
RABGGTA-217ENST00000560521 MTG1Q9BT17 334 aaPredicted RBP10.68□□□□□ -0.7
RABGGTA-217ENST00000560521 WDR11Q9BZH6 1224 aa10.68□□□□□ -0.7
RABGGTA-217ENST00000560521 DDX24Q9GZR7 859 aaKnown RBP eCLIP10.68□□□□□ -0.7
RABGGTA-217ENST00000560521 KCNH6Q9H252 994 aa10.68□□□□□ -0.7
RABGGTA-217ENST00000560521 CYP39A1Q9NYL5 469 aa10.68□□□□□ -0.7
RABGGTA-217ENST00000560521 MTUS1Q9ULD2 1270 aa10.68□□□□□ -0.7
RABGGTA-217ENST00000560521 RBM47A0AV96 593 aaKnown RBP10.67□□□□□ -0.7
RABGGTA-217ENST00000560521 PRDM1O75626 825 aa10.67□□□□□ -0.7
RABGGTA-217ENST00000560521 TTLL1O95922 423 aa10.67□□□□□ -0.7
RABGGTA-217ENST00000560521 ATP5JP18859 108 aa10.67□□□□□ -0.7
RABGGTA-217ENST00000560521 KCNJ6P48051 423 aa10.67□□□□□ -0.7
RABGGTA-217ENST00000560521 CPT1AP50416 773 aa10.67□□□□□ -0.7
RABGGTA-217ENST00000560521 STAT2P52630 851 aa10.67□□□□□ -0.7
RABGGTA-217ENST00000560521 SNAP25P60880 206 aa10.67□□□□□ -0.7
RABGGTA-217ENST00000560521 DEFB103AP81534 67 aa10.67□□□□□ -0.7
RABGGTA-217ENST00000560521 TCTN1Q2MV58 587 aa10.67□□□□□ -0.7
RABGGTA-217ENST00000560521 HSP90AB4PQ58FF6 505 aa10.67□□□□□ -0.7
RABGGTA-217ENST00000560521 NFRKBQ6P4R8 1299 aa10.67□□□□□ -0.7
RABGGTA-217ENST00000560521 ZNF444Q8N0Y2 327 aaPredicted RBP10.67□□□□□ -0.7
RABGGTA-217ENST00000560521 STAG1Q8WVM7 1258 aa10.67□□□□□ -0.7
RABGGTA-217ENST00000560521 CHMP4CQ96CF2 233 aa10.67□□□□□ -0.7
RABGGTA-217ENST00000560521 KIF1BPQ96EK5 621 aa10.67□□□□□ -0.7
RABGGTA-217ENST00000560521 HAUS7Q99871 368 aa10.67□□□□□ -0.7
RABGGTA-217ENST00000560521 ZBED2Q9BTP6 218 aa10.67□□□□□ -0.7
RABGGTA-217ENST00000560521 BCL11AQ9H165 835 aa10.67□□□□□ -0.7
RABGGTA-217ENST00000560521 SYNPO2Q9UMS6 1093 aa10.67□□□□□ -0.7
RABGGTA-217ENST00000560521 LINC01553A4QN01 128 aa10.66□□□□□ -0.7
RABGGTA-217ENST00000560521 DCXO43602 365 aa10.66□□□□□ -0.7
RABGGTA-217ENST00000560521 GJB5O95377 273 aa10.66□□□□□ -0.7
RABGGTA-217ENST00000560521 PTPN11Q06124 597 aaPredicted RBP10.66□□□□□ -0.7
RABGGTA-217ENST00000560521 BFSP2Q13515 415 aa10.66□□□□□ -0.7
RABGGTA-217ENST00000560521 NSMFQ6X4W1 530 aa10.66□□□□□ -0.7
RABGGTA-217ENST00000560521 FAM160B2Q86V87 743 aa10.66□□□□□ -0.7
RABGGTA-217ENST00000560521 OR6J1Q8NGC5 347 aa10.66□□□□□ -0.7
RABGGTA-217ENST00000560521 NEK9Q8TD19 979 aa10.66□□□□□ -0.7
RABGGTA-217ENST00000560521 CHURC1Q8WUH1 139 aa10.66□□□□□ -0.7
RABGGTA-217ENST00000560521 TGS1Q96RS0 853 aaKnown RBP10.66□□□□□ -0.7
RABGGTA-217ENST00000560521 CTAGE1Q96RT6 745 aa10.66□□□□□ -0.7
RABGGTA-217ENST00000560521 PHOX2BQ99453 314 aa10.66□□□□□ -0.7
RABGGTA-217ENST00000560521 GPHNQ9NQX3 736 aaPredicted RBP10.66□□□□□ -0.7
RABGGTA-217ENST00000560521 LOXHD1Q8IVV2 1947 aa10.65□□□□□ -0.7
RABGGTA-217ENST00000560521 PLA2G6O60733 806 aa10.65□□□□□ -0.7
RABGGTA-217ENST00000560521 MCCP23508 829 aa10.65□□□□□ -0.7
RABGGTA-217ENST00000560521 ALDH5A1P51649 535 aaPredicted RBP10.65□□□□□ -0.7
RABGGTA-217ENST00000560521 PTGISQ16647 500 aa10.65□□□□□ -0.7
RABGGTA-217ENST00000560521 LRRFIP1Q32MZ4 808 aaKnown RBP10.65□□□□□ -0.7
RABGGTA-217ENST00000560521 GIMAP6Q6P9H5 292 aa10.65□□□□□ -0.7
RABGGTA-217ENST00000560521 HFE2Q6ZVN8 426 aa10.65□□□□□ -0.7
RABGGTA-217ENST00000560521 KCTD1Q719H9 257 aa10.65□□□□□ -0.7
RABGGTA-217ENST00000560521 FTSJ3Q8IY81 847 aaKnown RBP10.65□□□□□ -0.7
RABGGTA-217ENST00000560521 NEDD1Q8NHV4 660 aa10.65□□□□□ -0.7
RABGGTA-217ENST00000560521 COPS5Q92905 334 aa10.65□□□□□ -0.7
RABGGTA-217ENST00000560521 RAD9AQ99638 391 aa10.65□□□□□ -0.7
RABGGTA-217ENST00000560521 DOCK5Q9H7D0 1870 aa10.64□□□□□ -0.71
RABGGTA-217ENST00000560521 C19orf67A6NJJ6 358 aa10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms