RNA–Protein interactions for RNA: ENST00000560483.1

LRRC28-219, Transcript of leucine rich repeat containing 28, humanhuman

TSL 5

Gene LRRC28, Length 535 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-219ENST00000560483 RNF208Q9H0X6 261 aa9.35□□□□□ -0.91
LRRC28-219ENST00000560483 MROH8Q9H579 483 aa9.35□□□□□ -0.91
LRRC28-219ENST00000560483 PRDM9Q9NQV7 894 aa9.35□□□□□ -0.91
LRRC28-219ENST00000560483 SYNPO2Q9UMS6 1093 aa9.35□□□□□ -0.91
LRRC28-219ENST00000560483 PLXNB2O15031 1838 aa9.34□□□□□ -0.91
LRRC28-219ENST00000560483 CCDC69A6NI79 296 aa9.34□□□□□ -0.91
LRRC28-219ENST00000560483 INHAP05111 366 aa9.34□□□□□ -0.91
LRRC28-219ENST00000560483 PARP1P09874 1014 aaKnown RBP9.34□□□□□ -0.91
LRRC28-219ENST00000560483 ALAS1P13196 640 aa9.34□□□□□ -0.91
LRRC28-219ENST00000560483 CNGA1P29973 690 aa9.34□□□□□ -0.91
LRRC28-219ENST00000560483 COPB2P35606 906 aa9.34□□□□□ -0.91
LRRC28-219ENST00000560483 SYDE2Q5VT97 1194 aa9.34□□□□□ -0.91
LRRC28-219ENST00000560483 TTBK2Q6IQ55 1244 aa9.34□□□□□ -0.91
LRRC28-219ENST00000560483 CYB5R4Q7L1T6 521 aa9.34□□□□□ -0.91
LRRC28-219ENST00000560483 CATIPQ7Z7H3 387 aa9.34□□□□□ -0.91
LRRC28-219ENST00000560483 SCUBE3Q8IX30 993 aa9.34□□□□□ -0.91
LRRC28-219ENST00000560483 ANKRD35Q8N283 1001 aa9.34□□□□□ -0.91
LRRC28-219ENST00000560483 ENAHQ8N8S7 591 aaPredicted RBP9.34□□□□□ -0.91
LRRC28-219ENST00000560483 APBA2Q99767 749 aa9.34□□□□□ -0.91
LRRC28-219ENST00000560483 VAT1LQ9HCJ6 419 aa9.34□□□□□ -0.91
LRRC28-219ENST00000560483 CCPG1Q9ULG6 757 aa9.34□□□□□ -0.91
LRRC28-219ENST00000560483 SLC15A5A6NIM6 579 aa9.33□□□□□ -0.92
LRRC28-219ENST00000560483 PRC1O43663 620 aa9.33□□□□□ -0.92
LRRC28-219ENST00000560483 HMGCRP04035 888 aa9.33□□□□□ -0.92
LRRC28-219ENST00000560483 FDX1P10109 184 aa9.33□□□□□ -0.92
LRRC28-219ENST00000560483 PDHBP11177 359 aa9.33□□□□□ -0.92
LRRC28-219ENST00000560483 ADORA2AP29274 412 aa9.33□□□□□ -0.92
LRRC28-219ENST00000560483 MCM5P33992 734 aa9.33□□□□□ -0.92
LRRC28-219ENST00000560483 MAP2K5Q13163 448 aa9.33□□□□□ -0.92
LRRC28-219ENST00000560483 MTFR1Q15390 333 aa9.33□□□□□ -0.92
LRRC28-219ENST00000560483 MFSD14CQ5VZR4 134 aa9.33□□□□□ -0.92
LRRC28-219ENST00000560483 SYNE3Q6ZMZ3 975 aa9.33□□□□□ -0.92
LRRC28-219ENST00000560483 RIOX2Q8IUF8 465 aa9.33□□□□□ -0.92
LRRC28-219ENST00000560483 SHCBP1Q8NEM2 672 aa9.33□□□□□ -0.92
LRRC28-219ENST00000560483 NLRP7Q8WX94 980 aa9.33□□□□□ -0.92
LRRC28-219ENST00000560483 ZNF333Q96JL9 665 aa9.33□□□□□ -0.92
LRRC28-219ENST00000560483 LRRC2Q9BYS8 371 aa9.33□□□□□ -0.92
LRRC28-219ENST00000560483 UBA5Q9GZZ9 404 aa9.33□□□□□ -0.92
LRRC28-219ENST00000560483 PRR12Q9ULL5 1215 aa9.33□□□□□ -0.92
LRRC28-219ENST00000560483 PARP14Q460N5 1801 aa9.33□□□□□ -0.92
LRRC28-219ENST00000560483 KIAA0100Q14667 2235 aaKnown RBP9.32□□□□□ -0.92
LRRC28-219ENST00000560483 STRNO43815 780 aa9.32□□□□□ -0.92
LRRC28-219ENST00000560483 NR1I2O75469 434 aa9.32□□□□□ -0.92
LRRC28-219ENST00000560483 TFRCP02786 760 aaKnown RBP9.32□□□□□ -0.92
LRRC28-219ENST00000560483 PGK2P07205 417 aa9.32□□□□□ -0.92
LRRC28-219ENST00000560483 CCL5P13501 91 aa9.32□□□□□ -0.92
LRRC28-219ENST00000560483 IRF5Q13568 498 aa9.32□□□□□ -0.92
LRRC28-219ENST00000560483 KRT32Q14532 448 aa9.32□□□□□ -0.92
LRRC28-219ENST00000560483 USH1GQ495M9 461 aa9.32□□□□□ -0.92
LRRC28-219ENST00000560483 ASPRV1Q53RT3 343 aa9.32□□□□□ -0.92
LRRC28-219ENST00000560483 GPATCH4Q5T3I0 446 aaKnown RBP9.32□□□□□ -0.92
LRRC28-219ENST00000560483 NSMFQ6X4W1 530 aa9.32□□□□□ -0.92
LRRC28-219ENST00000560483 STOX1Q6ZVD7 989 aa9.32□□□□□ -0.92
LRRC28-219ENST00000560483 TRMT44Q8IYL2 757 aaKnown RBP9.32□□□□□ -0.92
LRRC28-219ENST00000560483 CTCFLQ8NI51 663 aaPredicted RBP9.32□□□□□ -0.92
LRRC28-219ENST00000560483 PXYLP1Q8TE99 480 aa9.32□□□□□ -0.92
LRRC28-219ENST00000560483 PIBF1Q8WXW3 757 aa9.32□□□□□ -0.92
LRRC28-219ENST00000560483 ARMC5Q96C12 935 aa9.32□□□□□ -0.92
LRRC28-219ENST00000560483 AGBL1Q96MI9 1066 aa9.32□□□□□ -0.92
LRRC28-219ENST00000560483 TRERF1Q96PN7 1200 aa9.32□□□□□ -0.92
LRRC28-219ENST00000560483 NEK1Q96PY6 1258 aa9.32□□□□□ -0.92
LRRC28-219ENST00000560483 UNC93B1Q9H1C4 597 aa9.32□□□□□ -0.92
LRRC28-219ENST00000560483 CPVLQ9H3G5 476 aa9.32□□□□□ -0.92
LRRC28-219ENST00000560483 ACAD9Q9H845 621 aa9.32□□□□□ -0.92
LRRC28-219ENST00000560483 SLC38A10Q9HBR0 1119 aa9.32□□□□□ -0.92
LRRC28-219ENST00000560483 HMX1Q9NP08 348 aaPredicted RBP9.32□□□□□ -0.92
LRRC28-219ENST00000560483 RNF146Q9NTX7 359 aa9.32□□□□□ -0.92
LRRC28-219ENST00000560483 TOR4AQ9NXH8 423 aa9.32□□□□□ -0.92
LRRC28-219ENST00000560483 FBXO40Q9UH90 709 aa9.32□□□□□ -0.92
LRRC28-219ENST00000560483 TAF6LQ9Y6J9 622 aa9.32□□□□□ -0.92
LRRC28-219ENST00000560483 MYH6P13533 1939 aa9.32□□□□□ -0.92
LRRC28-219ENST00000560483 ZNFX1Q9P2E3 1918 aaKnown RBP9.32□□□□□ -0.92
LRRC28-219ENST00000560483 RLFQ13129 1914 aa9.31□□□□□ -0.92
LRRC28-219ENST00000560483 HTTP42858 3142 aa9.31□□□□□ -0.92
LRRC28-219ENST00000560483 PTPDC1A2A3K4 754 aa9.31□□□□□ -0.92
LRRC28-219ENST00000560483 OAZ1P54368 228 aa9.31□□□□□ -0.92
LRRC28-219ENST00000560483 ZNF543Q08ER8 600 aa9.31□□□□□ -0.92
LRRC28-219ENST00000560483 GRB14Q14449 540 aa9.31□□□□□ -0.92
LRRC28-219ENST00000560483 CCL14Q16627 93 aa9.31□□□□□ -0.92
LRRC28-219ENST00000560483 MORN1Q5T089 497 aa9.31□□□□□ -0.92
LRRC28-219ENST00000560483 HOMER1Q86YM7 354 aa9.31□□□□□ -0.92
LRRC28-219ENST00000560483 RAB11FIP4Q86YS3 637 aa9.31□□□□□ -0.92
LRRC28-219ENST00000560483 CCDC144CPQ8IYA2 1237 aa9.31□□□□□ -0.92
LRRC28-219ENST00000560483 TRIB2Q92519 343 aa9.31□□□□□ -0.92
LRRC28-219ENST00000560483 TCEANC2Q96MN5 208 aa9.31□□□□□ -0.92
LRRC28-219ENST00000560483 JAKMIP1Q96N16 626 aaKnown RBP9.31□□□□□ -0.92
LRRC28-219ENST00000560483 DEFB118Q96PH6 123 aa9.31□□□□□ -0.92
LRRC28-219ENST00000560483 SPSB2Q99619 263 aa9.31□□□□□ -0.92
LRRC28-219ENST00000560483 GJD2Q9UKL4 321 aa9.31□□□□□ -0.92
LRRC28-219ENST00000560483 ZNF214Q9UL59 606 aaPredicted RBP9.31□□□□□ -0.92
LRRC28-219ENST00000560483 FCF1Q9Y324 198 aaKnown RBP9.31□□□□□ -0.92
LRRC28-219ENST00000560483 SLC12A7Q9Y666 1083 aa9.31□□□□□ -0.92
LRRC28-219ENST00000560483 A0A0G2JMZ2 1700 aa9.31□□□□□ -0.92
LRRC28-219ENST00000560483 KLRF2D3W0D1 207 aa9.3□□□□□ -0.92
LRRC28-219ENST00000560483 EIF5BO60841 1220 aaKnown RBP9.3□□□□□ -0.92
LRRC28-219ENST00000560483 XRCC5P13010 732 aaKnown RBP9.3□□□□□ -0.92
LRRC28-219ENST00000560483 TAL1P17542 331 aaPredicted RBP9.3□□□□□ -0.92
LRRC28-219ENST00000560483 EN2P19622 333 aaPredicted RBP9.3□□□□□ -0.92
LRRC28-219ENST00000560483 KIF5BP33176 963 aa9.3□□□□□ -0.92
LRRC28-219ENST00000560483 CYP2C19P33261 490 aa9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms