RNA–Protein interactions for RNA: ENST00000560365.5

IRF9-209, Transcript of interferon regulatory factor 9, humanhuman

TSL 2

Gene IRF9, Length 623 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF9-209ENST00000560365 ZNF536O15090 1300 aa13.74□□□□□ -0.21
IRF9-209ENST00000560365 SMARCA5O60264 1052 aaPredicted RBP13.74□□□□□ -0.21
IRF9-209ENST00000560365 KCNQ1P51787 676 aa13.74□□□□□ -0.21
IRF9-209ENST00000560365 TTLL4Q14679 1199 aa13.74□□□□□ -0.21
IRF9-209ENST00000560365 CCDC96Q2M329 555 aa13.74□□□□□ -0.21
IRF9-209ENST00000560365 RCSD1Q6JBY9 416 aa13.74□□□□□ -0.21
IRF9-209ENST00000560365 OR6J1Q8NGC5 347 aa13.74□□□□□ -0.21
IRF9-209ENST00000560365 ARNTL2Q8WYA1 636 aa13.74□□□□□ -0.21
IRF9-209ENST00000560365 WDR11Q9BZH6 1224 aa13.74□□□□□ -0.21
IRF9-209ENST00000560365 TRMT13Q9NUP7 481 aaKnown RBP13.74□□□□□ -0.21
IRF9-209ENST00000560365 MTMR7Q9Y216 660 aa13.74□□□□□ -0.21
IRF9-209ENST00000560365 MTCH2Q9Y6C9 303 aa13.74□□□□□ -0.21
IRF9-209ENST00000560365 MUC3AQ02505 3323 aa13.74□□□□□ -0.21
IRF9-209ENST00000560365 LOC102724159A0A0B4J2E5 919 aa13.73□□□□□ -0.21
IRF9-209ENST00000560365 M0R2C6 588 aa13.73□□□□□ -0.21
IRF9-209ENST00000560365 KPNA6O60684 536 aa13.73□□□□□ -0.21
IRF9-209ENST00000560365 POU3F3P20264 500 aaPredicted RBP13.73□□□□□ -0.21
IRF9-209ENST00000560365 KCNJ6P48051 423 aa13.73□□□□□ -0.21
IRF9-209ENST00000560365 PPARAQ07869 468 aa13.73□□□□□ -0.21
IRF9-209ENST00000560365 BFSP2Q13515 415 aa13.73□□□□□ -0.21
IRF9-209ENST00000560365 PWP2Q15269 919 aaKnown RBP13.73□□□□□ -0.21
IRF9-209ENST00000560365 MUM1L1Q5H9M0 696 aa13.73□□□□□ -0.21
IRF9-209ENST00000560365 HLA-CQ95604 372 aa13.73□□□□□ -0.21
IRF9-209ENST00000560365 PRR12Q9ULL5 1215 aa13.73□□□□□ -0.21
IRF9-209ENST00000560365 CHD9Q3L8U1 2897 aa13.72□□□□□ -0.21
IRF9-209ENST00000560365 PTPDC1A2A3K4 754 aa13.72□□□□□ -0.21
IRF9-209ENST00000560365 B4DLN1 442 aa13.72□□□□□ -0.21
IRF9-209ENST00000560365 RFXAPO00287 272 aa13.72□□□□□ -0.21
IRF9-209ENST00000560365 PITPNM1O00562 1244 aa13.72□□□□□ -0.21
IRF9-209ENST00000560365 ICAM1P05362 532 aa13.72□□□□□ -0.21
IRF9-209ENST00000560365 ALDH5A1P51649 535 aaPredicted RBP13.72□□□□□ -0.21
IRF9-209ENST00000560365 MRPL12P52815 198 aaKnown RBP13.72□□□□□ -0.21
IRF9-209ENST00000560365 SNAP25P60880 206 aa13.72□□□□□ -0.21
IRF9-209ENST00000560365 PURAQ00577 322 aaKnown RBP13.72□□□□□ -0.21
IRF9-209ENST00000560365 PPP2R5BQ15173 497 aa13.72□□□□□ -0.21
IRF9-209ENST00000560365 TMEM31Q5JXX7 168 aa13.72□□□□□ -0.21
IRF9-209ENST00000560365 CCDC155Q8N6L0 562 aa13.72□□□□□ -0.21
IRF9-209ENST00000560365 PNMA2Q9UL42 364 aa13.72□□□□□ -0.21
IRF9-209ENST00000560365 ARIH1Q9Y4X5 557 aaPredicted RBP13.72□□□□□ -0.21
IRF9-209ENST00000560365 DDX49Q9Y6V7 483 aaKnown RBP13.72□□□□□ -0.21
IRF9-209ENST00000560365 GREB1LQ9C091 1923 aaPredicted RBP13.72□□□□□ -0.21
IRF9-209ENST00000560365 NKRFO15226 690 aaKnown RBP eCLIP13.71□□□□□ -0.21
IRF9-209ENST00000560365 TLL1O43897 1013 aa13.71□□□□□ -0.21
IRF9-209ENST00000560365 BAIAP3O94812 1187 aa13.71□□□□□ -0.21
IRF9-209ENST00000560365 PTGS1P23219 599 aa13.71□□□□□ -0.21
IRF9-209ENST00000560365 PTPN11Q06124 597 aaPredicted RBP13.71□□□□□ -0.21
IRF9-209ENST00000560365 PDE4DQ08499 809 aa13.71□□□□□ -0.21
IRF9-209ENST00000560365 BAATQ14032 418 aaPredicted RBP13.71□□□□□ -0.21
IRF9-209ENST00000560365 NFRKBQ6P4R8 1299 aa13.71□□□□□ -0.21
IRF9-209ENST00000560365 HERC6Q8IVU3 1022 aa13.71□□□□□ -0.21
IRF9-209ENST00000560365 MORC4Q8TE76 937 aa13.71□□□□□ -0.21
IRF9-209ENST00000560365 DCAF4Q8WV16 495 aa13.71□□□□□ -0.21
IRF9-209ENST00000560365 ZBED2Q9BTP6 218 aa13.71□□□□□ -0.21
IRF9-209ENST00000560365 FSD1Q9BTV5 496 aa13.71□□□□□ -0.21
IRF9-209ENST00000560365 RANBP6O60518 1105 aaKnown RBP13.7□□□□□ -0.22
IRF9-209ENST00000560365 IQCF3P0C7M6 154 aa13.7□□□□□ -0.22
IRF9-209ENST00000560365 CALML3P27482 149 aa13.7□□□□□ -0.22
IRF9-209ENST00000560365 CHMP4BP1P59074 171 aa13.7□□□□□ -0.22
IRF9-209ENST00000560365 TAP1Q03518 808 aa13.7□□□□□ -0.22
IRF9-209ENST00000560365 NBPF20Q3BBV1 942 aa13.7□□□□□ -0.22
IRF9-209ENST00000560365 TMEM63BQ5T3F8 832 aa13.7□□□□□ -0.22
IRF9-209ENST00000560365 SCFD2Q8WU76 684 aa13.7□□□□□ -0.22
IRF9-209ENST00000560365 LRFN3Q9BTN0 628 aa13.7□□□□□ -0.22
IRF9-209ENST00000560365 HOXD11P31277 338 aaPredicted RBP13.69□□□□□ -0.22
IRF9-209ENST00000560365 SYDE2Q5VT97 1194 aa13.69□□□□□ -0.22
IRF9-209ENST00000560365 TSHZ3Q63HK5 1081 aa13.69□□□□□ -0.22
IRF9-209ENST00000560365 RNF207Q6ZRF8 634 aa13.69□□□□□ -0.22
IRF9-209ENST00000560365 PURBQ96QR8 312 aaKnown RBP13.69□□□□□ -0.22
IRF9-209ENST00000560365 CRBNQ96SW2 442 aa13.69□□□□□ -0.22
IRF9-209ENST00000560365 RANBP17Q9H2T7 1088 aaKnown RBP13.69□□□□□ -0.22
IRF9-209ENST00000560365 TOMM22Q9NS69 142 aa13.69□□□□□ -0.22
IRF9-209ENST00000560365 GRB10Q13322 594 aa13.68□□□□□ -0.22
IRF9-209ENST00000560365 CAGE1Q8TC20 777 aa13.68□□□□□ -0.22
IRF9-209ENST00000560365 SEC62Q99442 399 aaKnown RBP13.68□□□□□ -0.22
IRF9-209ENST00000560365 EPHX3Q9H6B9 360 aa13.68□□□□□ -0.22
IRF9-209ENST00000560365 TTC41PQ6P2S7 1318 aa13.67□□□□□ -0.22
IRF9-209ENST00000560365 RBM47A0AV96 593 aaKnown RBP13.67□□□□□ -0.22
IRF9-209ENST00000560365 NFIBO00712 420 aa13.67□□□□□ -0.22
IRF9-209ENST00000560365 PARNO95453 639 aaKnown RBP13.67□□□□□ -0.22
IRF9-209ENST00000560365 TXNP10599 105 aaKnown RBP13.67□□□□□ -0.22
IRF9-209ENST00000560365 SLC16A2P36021 539 aa13.67□□□□□ -0.22
IRF9-209ENST00000560365 PTGISQ16647 500 aa13.67□□□□□ -0.22
IRF9-209ENST00000560365 KRT40Q6A162 431 aa13.67□□□□□ -0.22
IRF9-209ENST00000560365 DNERQ8NFT8 737 aa13.67□□□□□ -0.22
IRF9-209ENST00000560365 AFAP1L1Q8TED9 768 aa13.67□□□□□ -0.22
IRF9-209ENST00000560365 VWCEQ96DN2 955 aa13.67□□□□□ -0.22
IRF9-209ENST00000560365 IL17RBQ9NRM6 502 aa13.67□□□□□ -0.22
IRF9-209ENST00000560365 LMCD1Q9NZU5 365 aa13.67□□□□□ -0.22
IRF9-209ENST00000560365 EPOPA6NHQ4 379 aa13.66□□□□□ -0.22
IRF9-209ENST00000560365 A6NJR5 290 aa13.66□□□□□ -0.22
IRF9-209ENST00000560365 NMT2O60551 498 aa13.66□□□□□ -0.22
IRF9-209ENST00000560365 TOP1P11387 765 aaKnown RBP13.66□□□□□ -0.22
IRF9-209ENST00000560365 CTDSPL2Q05D32 466 aa13.66□□□□□ -0.22
IRF9-209ENST00000560365 SLC30A10Q6XR72 485 aa13.66□□□□□ -0.22
IRF9-209ENST00000560365 GPCPD1Q9NPB8 672 aa13.66□□□□□ -0.22
IRF9-209ENST00000560365 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.66□□□□□ -0.22
IRF9-209ENST00000560365 LRRC37A2A6NM11 1700 aa13.66□□□□□ -0.22
IRF9-209ENST00000560365 MYH7P12883 1935 aa13.66□□□□□ -0.22
IRF9-209ENST00000560365 FRMPD2Q68DX3 1309 aaPredicted RBP13.65□□□□□ -0.22
IRF9-209ENST00000560365 MYH4Q9Y623 1939 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms