RNA–Protein interactions for RNA: ENST00000560314.1

LINC02253-202, Transcript of long intergenic non-protein coding RNA 2253, humanhuman

TSL 5 BASIC

Gene LINC02253, Length 565 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02253-202ENST00000560314 MPHOSPH6Q99547 160 aaKnown RBP13.16□□□□□ -0.3
LINC02253-202ENST00000560314 PRDM12Q9H4Q4 367 aa13.16□□□□□ -0.3
LINC02253-202ENST00000560314 SLC28A3Q9HAS3 691 aa13.16□□□□□ -0.3
LINC02253-202ENST00000560314 PDGFCQ9NRA1 345 aa13.16□□□□□ -0.3
LINC02253-202ENST00000560314 HELLSQ9NRZ9 838 aa13.16□□□□□ -0.3
LINC02253-202ENST00000560314 TCP11L1Q9NUJ3 509 aa13.16□□□□□ -0.3
LINC02253-202ENST00000560314 CXXC1Q9P0U4 656 aaPredicted RBP13.16□□□□□ -0.3
LINC02253-202ENST00000560314 THEGQ9P2T0 379 aa13.16□□□□□ -0.3
LINC02253-202ENST00000560314 GRIN2DO15399 1336 aa13.15□□□□□ -0.3
LINC02253-202ENST00000560314 UMODL1Q5DID0 1318 aa13.15□□□□□ -0.3
LINC02253-202ENST00000560314 NKRFO15226 690 aaKnown RBP eCLIP13.15□□□□□ -0.3
LINC02253-202ENST00000560314 BRDTQ58F21 947 aaPredicted RBP13.15□□□□□ -0.3
LINC02253-202ENST00000560314 SYDE2Q5VT97 1194 aa13.15□□□□□ -0.3
LINC02253-202ENST00000560314 EEPD1Q7L9B9 569 aa13.15□□□□□ -0.3
LINC02253-202ENST00000560314 RASGRP2Q7LDG7 609 aa13.15□□□□□ -0.3
LINC02253-202ENST00000560314 WNT8AQ9H1J5 351 aa13.15□□□□□ -0.3
LINC02253-202ENST00000560314 ALDH8A1Q9H2A2 487 aaPredicted RBP13.15□□□□□ -0.3
LINC02253-202ENST00000560314 PCDHB15Q9Y5E8 787 aa13.15□□□□□ -0.3
LINC02253-202ENST00000560314 WDR19Q8NEZ3 1342 aa13.14□□□□□ -0.31
LINC02253-202ENST00000560314 LAMA4Q16363 1823 aa13.14□□□□□ -0.31
LINC02253-202ENST00000560314 PTPDC1A2A3K4 754 aa13.14□□□□□ -0.31
LINC02253-202ENST00000560314 TNFRSF10AO00220 468 aa13.14□□□□□ -0.31
LINC02253-202ENST00000560314 NT5C2P49902 561 aa13.14□□□□□ -0.31
LINC02253-202ENST00000560314 SNAP25P60880 206 aa13.14□□□□□ -0.31
LINC02253-202ENST00000560314 PURAQ00577 322 aaKnown RBP13.14□□□□□ -0.31
LINC02253-202ENST00000560314 BAATQ14032 418 aaPredicted RBP13.14□□□□□ -0.31
LINC02253-202ENST00000560314 VPS53Q5VIR6 699 aa13.14□□□□□ -0.31
LINC02253-202ENST00000560314 OTOP2Q7RTS6 562 aa13.14□□□□□ -0.31
LINC02253-202ENST00000560314 DNERQ8NFT8 737 aa13.14□□□□□ -0.31
LINC02253-202ENST00000560314 WDR11Q9BZH6 1224 aa13.14□□□□□ -0.31
LINC02253-202ENST00000560314 TRPV6Q9H1D0 765 aa13.14□□□□□ -0.31
LINC02253-202ENST00000560314 TOMM22Q9NS69 142 aa13.14□□□□□ -0.31
LINC02253-202ENST00000560314 SLC4A7Q9Y6M7 1214 aa13.14□□□□□ -0.31
LINC02253-202ENST00000560314 TNKSO95271 1327 aa13.13□□□□□ -0.31
LINC02253-202ENST00000560314 RBM47A0AV96 593 aaKnown RBP13.13□□□□□ -0.31
LINC02253-202ENST00000560314 B4DLN1 442 aa13.13□□□□□ -0.31
LINC02253-202ENST00000560314 NFIBO00712 420 aa13.13□□□□□ -0.31
LINC02253-202ENST00000560314 PDHBP11177 359 aa13.13□□□□□ -0.31
LINC02253-202ENST00000560314 SLC16A2P36021 539 aa13.13□□□□□ -0.31
LINC02253-202ENST00000560314 MRPL12P52815 198 aaKnown RBP13.13□□□□□ -0.31
LINC02253-202ENST00000560314 CCL23P55773 120 aa13.13□□□□□ -0.31
LINC02253-202ENST00000560314 PSMC6P62333 389 aa13.13□□□□□ -0.31
LINC02253-202ENST00000560314 PPP2R5BQ15173 497 aa13.13□□□□□ -0.31
LINC02253-202ENST00000560314 PPP2R2DQ66LE6 453 aa13.13□□□□□ -0.31
LINC02253-202ENST00000560314 NFRKBQ6P4R8 1299 aa13.13□□□□□ -0.31
LINC02253-202ENST00000560314 RNF207Q6ZRF8 634 aa13.13□□□□□ -0.31
LINC02253-202ENST00000560314 SCFD2Q8WU76 684 aa13.13□□□□□ -0.31
LINC02253-202ENST00000560314 CHMP4CQ96CF2 233 aa13.13□□□□□ -0.31
LINC02253-202ENST00000560314 TTC14Q96N46 770 aa13.13□□□□□ -0.31
LINC02253-202ENST00000560314 TMEM47Q9BQJ4 181 aa13.13□□□□□ -0.31
LINC02253-202ENST00000560314 MAF1Q9H063 256 aa13.13□□□□□ -0.31
LINC02253-202ENST00000560314 NKX2-4Q9H2Z4 354 aa13.13□□□□□ -0.31
LINC02253-202ENST00000560314 INCENPQ9NQS7 918 aa13.13□□□□□ -0.31
LINC02253-202ENST00000560314 GPHNQ9NQX3 736 aaPredicted RBP13.13□□□□□ -0.31
LINC02253-202ENST00000560314 MTMR7Q9Y216 660 aa13.13□□□□□ -0.31
LINC02253-202ENST00000560314 YBX2Q9Y2T7 364 aaKnown RBP13.13□□□□□ -0.31
LINC02253-202ENST00000560314 PCDHA11Q9Y5I1 949 aa13.13□□□□□ -0.31
LINC02253-202ENST00000560314 DDX49Q9Y6V7 483 aaKnown RBP13.13□□□□□ -0.31
LINC02253-202ENST00000560314 SCN5AQ14524 2016 aa13.13□□□□□ -0.31
LINC02253-202ENST00000560314 MYH6P13533 1939 aa13.13□□□□□ -0.31
LINC02253-202ENST00000560314 PRRC2BQ5JSZ5 2229 aaKnown RBP13.12□□□□□ -0.31
LINC02253-202ENST00000560314 PITPNM1O00562 1244 aa13.12□□□□□ -0.31
LINC02253-202ENST00000560314 KPNA6O60684 536 aa13.12□□□□□ -0.31
LINC02253-202ENST00000560314 PTGS1P23219 599 aa13.12□□□□□ -0.31
LINC02253-202ENST00000560314 EDNRBP24530 442 aa13.12□□□□□ -0.31
LINC02253-202ENST00000560314 RFC2P35250 354 aa13.12□□□□□ -0.31
LINC02253-202ENST00000560314 ADGRE1Q14246 886 aa13.12□□□□□ -0.31
LINC02253-202ENST00000560314 MCMDC2Q4G0Z9 681 aa13.12□□□□□ -0.31
LINC02253-202ENST00000560314 TTBK2Q6IQ55 1244 aa13.12□□□□□ -0.31
LINC02253-202ENST00000560314 ASB2Q96Q27 587 aa13.12□□□□□ -0.31
LINC02253-202ENST00000560314 MTG1Q9BT17 334 aaPredicted RBP13.12□□□□□ -0.31
LINC02253-202ENST00000560314 TSPYL2Q9H2G4 693 aaPredicted RBP13.12□□□□□ -0.31
LINC02253-202ENST00000560314 FRMPD2Q68DX3 1309 aaPredicted RBP13.12□□□□□ -0.31
LINC02253-202ENST00000560314 KIAA1217Q5T5P2 1943 aa13.11□□□□□ -0.31
LINC02253-202ENST00000560314 FGAP02671 866 aa13.11□□□□□ -0.31
LINC02253-202ENST00000560314 SNHG28P0DPA3 235 aa13.11□□□□□ -0.31
LINC02253-202ENST00000560314 ACTN1P12814 892 aa13.11□□□□□ -0.31
LINC02253-202ENST00000560314 ATP2A2P16615 1042 aaKnown RBP13.11□□□□□ -0.31
LINC02253-202ENST00000560314 IGFBP4P22692 258 aa13.11□□□□□ -0.31
LINC02253-202ENST00000560314 CALML3P27482 149 aa13.11□□□□□ -0.31
LINC02253-202ENST00000560314 PDE1AP54750 535 aa13.11□□□□□ -0.31
LINC02253-202ENST00000560314 MRPS5P82675 430 aaKnown RBP13.11□□□□□ -0.31
LINC02253-202ENST00000560314 PTPN11Q06124 597 aaPredicted RBP13.11□□□□□ -0.31
LINC02253-202ENST00000560314 PDE4DQ08499 809 aa13.11□□□□□ -0.31
LINC02253-202ENST00000560314 ZNF543Q08ER8 600 aa13.11□□□□□ -0.31
LINC02253-202ENST00000560314 RRP12Q5JTH9 1297 aaKnown RBP13.11□□□□□ -0.31
LINC02253-202ENST00000560314 GPATCH4Q5T3I0 446 aaKnown RBP13.11□□□□□ -0.31
LINC02253-202ENST00000560314 SLC30A10Q6XR72 485 aa13.11□□□□□ -0.31
LINC02253-202ENST00000560314 IL27Q8NEV9 243 aa13.11□□□□□ -0.31
LINC02253-202ENST00000560314 OR6J1Q8NGC5 347 aa13.11□□□□□ -0.31
LINC02253-202ENST00000560314 CLEC4DQ8WXI8 215 aa13.11□□□□□ -0.31
LINC02253-202ENST00000560314 PURBQ96QR8 312 aaKnown RBP13.11□□□□□ -0.31
LINC02253-202ENST00000560314 SLC9A7Q96T83 725 aa13.11□□□□□ -0.31
LINC02253-202ENST00000560314 RNF41Q9H4P4 317 aaPredicted RBP13.11□□□□□ -0.31
LINC02253-202ENST00000560314 TRMT13Q9NUP7 481 aaKnown RBP13.11□□□□□ -0.31
LINC02253-202ENST00000560314 CCDC171Q6TFL3 1326 aa13.11□□□□□ -0.31
LINC02253-202ENST00000560314 TRIP12Q14669 1992 aaPredicted RBP13.11□□□□□ -0.31
LINC02253-202ENST00000560314 CHD9Q3L8U1 2897 aa13.1□□□□□ -0.31
LINC02253-202ENST00000560314 CHD7Q9P2D1 2997 aa13.1□□□□□ -0.31
LINC02253-202ENST00000560314 A0A0D9SFI3 127 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms