RNA–Protein interactions for RNA: ENST00000560307.5

SNRPA1-209, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 433 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-209ENST00000560307 CEP83Q9Y592 693 aa6.76□□□□□ -1.33
SNRPA1-209ENST00000560307 USP6P35125 1406 aa6.76□□□□□ -1.33
SNRPA1-209ENST00000560307 NEDD4P46934 1319 aa6.76□□□□□ -1.33
SNRPA1-209ENST00000560307 NWD1Q149M9 1564 aa6.75□□□□□ -1.33
SNRPA1-209ENST00000560307 SHOX2O60902 331 aaPredicted RBP6.75□□□□□ -1.33
SNRPA1-209ENST00000560307 MAP4K4O95819 1239 aaPredicted RBP6.75□□□□□ -1.33
SNRPA1-209ENST00000560307 POLR3DP05423 398 aaPredicted RBP6.75□□□□□ -1.33
SNRPA1-209ENST00000560307 AMPHP49418 695 aa6.75□□□□□ -1.33
SNRPA1-209ENST00000560307 ARSDP51689 593 aa6.75□□□□□ -1.33
SNRPA1-209ENST00000560307 UBASH3AP57075 661 aa6.75□□□□□ -1.33
SNRPA1-209ENST00000560307 PIP4K2BP78356 416 aa6.75□□□□□ -1.33
SNRPA1-209ENST00000560307 ARID5AQ03989 594 aa6.75□□□□□ -1.33
SNRPA1-209ENST00000560307 DPCR1Q3MIW9 517 aa6.75□□□□□ -1.33
SNRPA1-209ENST00000560307 MEI1Q5TIA1 1274 aa6.75□□□□□ -1.33
SNRPA1-209ENST00000560307 ARHGEF25Q86VW2 580 aa6.75□□□□□ -1.33
SNRPA1-209ENST00000560307 VPS37DQ86XT2 251 aa6.75□□□□□ -1.33
SNRPA1-209ENST00000560307 SNX29Q8TEQ0 813 aa6.75□□□□□ -1.33
SNRPA1-209ENST00000560307 ANKRD24Q8TF21 1146 aa6.75□□□□□ -1.33
SNRPA1-209ENST00000560307 SECISBP2LQ93073 1101 aaKnown RBP6.75□□□□□ -1.33
SNRPA1-209ENST00000560307 KLRG1Q96E93 195 aa6.75□□□□□ -1.33
SNRPA1-209ENST00000560307 ZNF274Q96GC6 653 aaPredicted RBP6.75□□□□□ -1.33
SNRPA1-209ENST00000560307 CCDC34Q96HJ3 373 aa6.75□□□□□ -1.33
SNRPA1-209ENST00000560307 PANX2Q96RD6 677 aa6.75□□□□□ -1.33
SNRPA1-209ENST00000560307 BAG1Q99933 345 aaPredicted RBP6.75□□□□□ -1.33
SNRPA1-209ENST00000560307 SDF4Q9BRK5 362 aa6.75□□□□□ -1.33
SNRPA1-209ENST00000560307 KRTAP4-9Q9BYQ8 210 aa6.75□□□□□ -1.33
SNRPA1-209ENST00000560307 GRIP2Q9C0E4 1043 aa6.75□□□□□ -1.33
SNRPA1-209ENST00000560307 CDC23Q9UJX2 597 aa6.75□□□□□ -1.33
SNRPA1-209ENST00000560307 C4AP0C0L4 1744 aa6.75□□□□□ -1.33
SNRPA1-209ENST00000560307 C4BP0C0L5 1744 aa6.75□□□□□ -1.33
SNRPA1-209ENST00000560307 UTYO14607 1347 aa6.75□□□□□ -1.33
SNRPA1-209ENST00000560307 MAP3K19Q56UN5 1328 aa6.75□□□□□ -1.33
SNRPA1-209ENST00000560307 CARMIL3Q8ND23 1372 aa6.74□□□□□ -1.33
SNRPA1-209ENST00000560307 PTPDC1A2A3K4 754 aa6.74□□□□□ -1.33
SNRPA1-209ENST00000560307 GNAT3A8MTJ3 354 aa6.74□□□□□ -1.33
SNRPA1-209ENST00000560307 TMCO5BA8MYB1 307 aa6.74□□□□□ -1.33
SNRPA1-209ENST00000560307 FANCGO15287 622 aa6.74□□□□□ -1.33
SNRPA1-209ENST00000560307 DYRK3O43781 588 aa6.74□□□□□ -1.33
SNRPA1-209ENST00000560307 JAK2O60674 1132 aa6.74□□□□□ -1.33
SNRPA1-209ENST00000560307 TAF5LO75529 589 aa6.74□□□□□ -1.33
SNRPA1-209ENST00000560307 CLSTN1O94985 981 aa6.74□□□□□ -1.33
SNRPA1-209ENST00000560307 CCDC175P0C221 793 aa6.74□□□□□ -1.33
SNRPA1-209ENST00000560307 USP17L7P0C7H9 530 aa6.74□□□□□ -1.33
SNRPA1-209ENST00000560307 CMA1P23946 247 aa6.74□□□□□ -1.33
SNRPA1-209ENST00000560307 ME1P48163 572 aa6.74□□□□□ -1.33
SNRPA1-209ENST00000560307 GYS2P54840 703 aa6.74□□□□□ -1.33
SNRPA1-209ENST00000560307 GNG11P61952 73 aa6.74□□□□□ -1.33
SNRPA1-209ENST00000560307 RACK1P63244 317 aaKnown RBP6.74□□□□□ -1.33
SNRPA1-209ENST00000560307 OS9Q13438 667 aaPredicted RBP6.74□□□□□ -1.33
SNRPA1-209ENST00000560307 LRP8Q14114 963 aa6.74□□□□□ -1.33
SNRPA1-209ENST00000560307 RRS1Q15050 365 aaKnown RBP6.74□□□□□ -1.33
SNRPA1-209ENST00000560307 MTHFSDQ2M296 383 aaKnown RBP6.74□□□□□ -1.33
SNRPA1-209ENST00000560307 KIF4BQ2VIQ3 1234 aa6.74□□□□□ -1.33
SNRPA1-209ENST00000560307 BEND3Q5T5X7 828 aa6.74□□□□□ -1.33
SNRPA1-209ENST00000560307 NBPF10Q6P3W6 841 aaKnown RBP6.74□□□□□ -1.33
SNRPA1-209ENST00000560307 OLFM4Q6UX06 510 aa6.74□□□□□ -1.33
SNRPA1-209ENST00000560307 LRRC31Q6UY01 552 aa6.74□□□□□ -1.33
SNRPA1-209ENST00000560307 GBP6Q6ZN66 633 aa6.74□□□□□ -1.33
SNRPA1-209ENST00000560307 LRRC69Q6ZNQ3 347 aa6.74□□□□□ -1.33
SNRPA1-209ENST00000560307 Q6ZUG5 572 aa6.74□□□□□ -1.33
SNRPA1-209ENST00000560307 LINC00301Q8NCQ3 95 aa6.74□□□□□ -1.33
SNRPA1-209ENST00000560307 AFAP1L1Q8TED9 768 aa6.74□□□□□ -1.33
SNRPA1-209ENST00000560307 CCDC51Q96ER9 411 aa6.74□□□□□ -1.33
SNRPA1-209ENST00000560307 RPGRIP1Q96KN7 1286 aa6.74□□□□□ -1.33
SNRPA1-209ENST00000560307 OSBPL7Q9BZF2 842 aa6.74□□□□□ -1.33
SNRPA1-209ENST00000560307 CXorf56Q9H5V9 222 aa6.74□□□□□ -1.33
SNRPA1-209ENST00000560307 C19orf44Q9H6X5 657 aa6.74□□□□□ -1.33
SNRPA1-209ENST00000560307 ANKZF1Q9H8Y5 726 aa6.74□□□□□ -1.33
SNRPA1-209ENST00000560307 PDE11AQ9HCR9 933 aa6.74□□□□□ -1.33
SNRPA1-209ENST00000560307 ZCCHC17Q9NP64 241 aaKnown RBP6.74□□□□□ -1.33
SNRPA1-209ENST00000560307 NPHS2Q9NP85 383 aa6.74□□□□□ -1.33
SNRPA1-209ENST00000560307 ZDHHC3Q9NYG2 299 aa6.74□□□□□ -1.33
SNRPA1-209ENST00000560307 ANKIB1Q9P2G1 1089 aa6.74□□□□□ -1.33
SNRPA1-209ENST00000560307 PCDHA7Q9UN72 937 aa6.74□□□□□ -1.33
SNRPA1-209ENST00000560307 RTCBQ9Y3I0 505 aaKnown RBP6.74□□□□□ -1.33
SNRPA1-209ENST00000560307 PHRF1Q9P1Y6 1649 aaKnown RBP6.74□□□□□ -1.33
SNRPA1-209ENST00000560307 COL15A1P39059 1388 aa6.73□□□□□ -1.33
SNRPA1-209ENST00000560307 PALLDQ8WX93 1383 aa6.73□□□□□ -1.33
SNRPA1-209ENST00000560307 PLEKHG1Q9ULL1 1385 aa6.73□□□□□ -1.33
SNRPA1-209ENST00000560307 PAX4O43316 350 aa6.73□□□□□ -1.33
SNRPA1-209ENST00000560307 PPP6R2O75170 966 aa6.73□□□□□ -1.33
SNRPA1-209ENST00000560307 SERPINC1P01008 464 aa6.73□□□□□ -1.33
SNRPA1-209ENST00000560307 HOXB4P17483 251 aaPredicted RBP6.73□□□□□ -1.33
SNRPA1-209ENST00000560307 CALRP27797 417 aaKnown RBP6.73□□□□□ -1.33
SNRPA1-209ENST00000560307 GPC1P35052 558 aa6.73□□□□□ -1.33
SNRPA1-209ENST00000560307 TXKP42681 527 aa6.73□□□□□ -1.33
SNRPA1-209ENST00000560307 SETQ01105 290 aaPredicted RBP6.73□□□□□ -1.33
SNRPA1-209ENST00000560307 DDR1Q08345 913 aa6.73□□□□□ -1.33
SNRPA1-209ENST00000560307 SCRN1Q12765 414 aa6.73□□□□□ -1.33
SNRPA1-209ENST00000560307 POU4F2Q12837 409 aa6.73□□□□□ -1.33
SNRPA1-209ENST00000560307 CASP8Q14790 479 aa6.73□□□□□ -1.33
SNRPA1-209ENST00000560307 STK38Q15208 465 aa6.73□□□□□ -1.33
SNRPA1-209ENST00000560307 TAF7Q15545 349 aaPredicted RBP6.73□□□□□ -1.33
SNRPA1-209ENST00000560307 TAF1CQ15572 869 aaPredicted RBP6.73□□□□□ -1.33
SNRPA1-209ENST00000560307 PRSS36Q5K4E3 855 aa6.73□□□□□ -1.33
SNRPA1-209ENST00000560307 NKAPLQ5M9Q1 402 aa6.73□□□□□ -1.33
SNRPA1-209ENST00000560307 DHX32Q7L7V1 743 aaKnown RBP6.73□□□□□ -1.33
SNRPA1-209ENST00000560307 CNPY4Q8N129 248 aa6.73□□□□□ -1.33
SNRPA1-209ENST00000560307 JMYQ8N9B5 988 aa6.73□□□□□ -1.33
SNRPA1-209ENST00000560307 TRIML1Q8N9V2 468 aa6.73□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms