RNA–Protein interactions for RNA: ENST00000560127.1

RABGGTA-213, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 4

Gene RABGGTA, Length 573 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-213ENST00000560127 MORC4Q8TE76 937 aa15.29■□□□□ 0.04
RABGGTA-213ENST00000560127 GDPD5Q8WTR4 605 aa15.29■□□□□ 0.04
RABGGTA-213ENST00000560127 PPP1R13LQ8WUF5 828 aa15.29■□□□□ 0.04
RABGGTA-213ENST00000560127 PURBQ96QR8 312 aaKnown RBP15.29■□□□□ 0.04
RABGGTA-213ENST00000560127 STRBPQ96SI9 672 aaKnown RBP15.29■□□□□ 0.04
RABGGTA-213ENST00000560127 BCL11AQ9H165 835 aa15.29■□□□□ 0.04
RABGGTA-213ENST00000560127 VTA1Q9NP79 307 aa15.29■□□□□ 0.04
RABGGTA-213ENST00000560127 POLR3EQ9NVU0 708 aa15.29■□□□□ 0.04
RABGGTA-213ENST00000560127 CYP39A1Q9NYL5 469 aa15.29■□□□□ 0.04
RABGGTA-213ENST00000560127 LMCD1Q9NZU5 365 aa15.29■□□□□ 0.04
RABGGTA-213ENST00000560127 SYNPO2Q9UMS6 1093 aa15.29■□□□□ 0.04
RABGGTA-213ENST00000560127 SPTBN4Q9H254 2564 aa15.29■□□□□ 0.04
RABGGTA-213ENST00000560127 MICAL3Q7RTP6 2002 aa15.28■□□□□ 0.04
RABGGTA-213ENST00000560127 MINDY4BA8MYZ0 360 aa15.28■□□□□ 0.04
RABGGTA-213ENST00000560127 TMEM232C9JQI7 657 aa15.28■□□□□ 0.04
RABGGTA-213ENST00000560127 PITPNM1O00562 1244 aa15.28■□□□□ 0.04
RABGGTA-213ENST00000560127 TTLL1O95922 423 aa15.28■□□□□ 0.04
RABGGTA-213ENST00000560127 ALAS1P13196 640 aa15.28■□□□□ 0.04
RABGGTA-213ENST00000560127 TKFCQ3LXA3 575 aa15.28■□□□□ 0.04
RABGGTA-213ENST00000560127 MUM1L1Q5H9M0 696 aa15.28■□□□□ 0.04
RABGGTA-213ENST00000560127 FAM178BQ8IXR5 827 aa15.28■□□□□ 0.04
RABGGTA-213ENST00000560127 FTOQ9C0B1 505 aaKnown RBP eCLIP15.28■□□□□ 0.04
RABGGTA-213ENST00000560127 UBE2ZQ9H832 354 aaPredicted RBP15.28■□□□□ 0.04
RABGGTA-213ENST00000560127 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP15.27■□□□□ 0.04
RABGGTA-213ENST00000560127 PRDM1O75626 825 aa15.27■□□□□ 0.04
RABGGTA-213ENST00000560127 BAIAP3O94812 1187 aa15.27■□□□□ 0.04
RABGGTA-213ENST00000560127 MYL3P08590 195 aa15.27■□□□□ 0.04
RABGGTA-213ENST00000560127 STAT2P52630 851 aa15.27■□□□□ 0.04
RABGGTA-213ENST00000560127 NBPF20Q3BBV1 942 aa15.27■□□□□ 0.04
RABGGTA-213ENST00000560127 LEXMQ3ZCV2 418 aa15.27■□□□□ 0.04
RABGGTA-213ENST00000560127 TMCO2Q7Z6W1 182 aaPredicted RBP15.27■□□□□ 0.04
RABGGTA-213ENST00000560127 RETREG2Q8NC44 543 aa15.27■□□□□ 0.04
RABGGTA-213ENST00000560127 MTG1Q9BT17 334 aaPredicted RBP15.27■□□□□ 0.04
RABGGTA-213ENST00000560127 CACNA1HO95180 2353 aa15.26■□□□□ 0.03
RABGGTA-213ENST00000560127 SNAP25P60880 206 aa15.26■□□□□ 0.03
RABGGTA-213ENST00000560127 NHLH1Q02575 133 aa15.26■□□□□ 0.03
RABGGTA-213ENST00000560127 FAM47CQ5HY64 1035 aa15.26■□□□□ 0.03
RABGGTA-213ENST00000560127 NFRKBQ6P4R8 1299 aa15.26■□□□□ 0.03
RABGGTA-213ENST00000560127 GIMAP6Q6P9H5 292 aa15.26■□□□□ 0.03
RABGGTA-213ENST00000560127 FAM160B2Q86V87 743 aa15.26■□□□□ 0.03
RABGGTA-213ENST00000560127 ZNF444Q8N0Y2 327 aaPredicted RBP15.26■□□□□ 0.03
RABGGTA-213ENST00000560127 GADD45GIP1Q8TAE8 222 aaPredicted RBP15.26■□□□□ 0.03
RABGGTA-213ENST00000560127 CHURC1Q8WUH1 139 aa15.26■□□□□ 0.03
RABGGTA-213ENST00000560127 STAG1Q8WVM7 1258 aa15.26■□□□□ 0.03
RABGGTA-213ENST00000560127 CHMP4CQ96CF2 233 aa15.26■□□□□ 0.03
RABGGTA-213ENST00000560127 UIMC1Q96RL1 719 aa15.26■□□□□ 0.03
RABGGTA-213ENST00000560127 WDR11Q9BZH6 1224 aa15.26■□□□□ 0.03
RABGGTA-213ENST00000560127 SUGCTQ9HAC7 445 aa15.26■□□□□ 0.03
RABGGTA-213ENST00000560127 ISY1Q9ULR0 285 aaKnown RBP15.26■□□□□ 0.03
RABGGTA-213ENST00000560127 MYH7BA7E2Y1 1941 aa15.25■□□□□ 0.03
RABGGTA-213ENST00000560127 PLIN4Q96Q06 1357 aa15.25■□□□□ 0.03
RABGGTA-213ENST00000560127 TECTAO75443 2155 aa15.25■□□□□ 0.03
RABGGTA-213ENST00000560127 IL9P15248 144 aa15.25■□□□□ 0.03
RABGGTA-213ENST00000560127 KCNJ6P48051 423 aa15.25■□□□□ 0.03
RABGGTA-213ENST00000560127 CPT1AP50416 773 aa15.25■□□□□ 0.03
RABGGTA-213ENST00000560127 WDR5P61964 334 aaKnown RBP15.25■□□□□ 0.03
RABGGTA-213ENST00000560127 GPNMBQ14956 572 aa15.25■□□□□ 0.03
RABGGTA-213ENST00000560127 ZSCAN25Q6NSZ9 544 aa15.25■□□□□ 0.03
RABGGTA-213ENST00000560127 EPB41L4AQ9HCS5 686 aaPredicted RBP15.25■□□□□ 0.03
RABGGTA-213ENST00000560127 ATG2AQ2TAZ0 1938 aa15.25■□□□□ 0.03
RABGGTA-213ENST00000560127 NLRC5Q86WI3 1866 aa15.25■□□□□ 0.03
RABGGTA-213ENST00000560127 KIAA1217Q5T5P2 1943 aa15.24■□□□□ 0.03
RABGGTA-213ENST00000560127 RBM47A0AV96 593 aaKnown RBP15.24■□□□□ 0.03
RABGGTA-213ENST00000560127 PLA2G6O60733 806 aa15.24■□□□□ 0.03
RABGGTA-213ENST00000560127 ALADP13716 330 aa15.24■□□□□ 0.03
RABGGTA-213ENST00000560127 KCNA5P22460 613 aa15.24■□□□□ 0.03
RABGGTA-213ENST00000560127 SSTR3P32745 418 aaPredicted RBP15.24■□□□□ 0.03
RABGGTA-213ENST00000560127 DEFB103AP81534 67 aa15.24■□□□□ 0.03
RABGGTA-213ENST00000560127 BFSP2Q13515 415 aa15.24■□□□□ 0.03
RABGGTA-213ENST00000560127 NSMFQ6X4W1 530 aa15.24■□□□□ 0.03
RABGGTA-213ENST00000560127 SIRT2Q8IXJ6 389 aa15.24■□□□□ 0.03
RABGGTA-213ENST00000560127 OR6J1Q8NGC5 347 aa15.24■□□□□ 0.03
RABGGTA-213ENST00000560127 NEDD1Q8NHV4 660 aa15.24■□□□□ 0.03
RABGGTA-213ENST00000560127 GMCL1Q96IK5 515 aa15.24■□□□□ 0.03
RABGGTA-213ENST00000560127 SNX27Q96L92 541 aa15.24■□□□□ 0.03
RABGGTA-213ENST00000560127 GPHNQ9NQX3 736 aaPredicted RBP15.24■□□□□ 0.03
RABGGTA-213ENST00000560127 MTUS1Q9ULD2 1270 aa15.24■□□□□ 0.03
RABGGTA-213ENST00000560127 MCCP23508 829 aa15.23■□□□□ 0.03
RABGGTA-213ENST00000560127 SLC1A4P43007 532 aa15.23■□□□□ 0.03
RABGGTA-213ENST00000560127 ALDH5A1P51649 535 aaPredicted RBP15.23■□□□□ 0.03
RABGGTA-213ENST00000560127 ERVK-21P61565 698 aa15.23■□□□□ 0.03
RABGGTA-213ENST00000560127 PTPN11Q06124 597 aaPredicted RBP15.23■□□□□ 0.03
RABGGTA-213ENST00000560127 IKQ13123 557 aaPredicted RBP15.23■□□□□ 0.03
RABGGTA-213ENST00000560127 PTCRAQ6ISU1 281 aaPredicted RBP15.23■□□□□ 0.03
RABGGTA-213ENST00000560127 OSBP2Q969R2 916 aa15.23■□□□□ 0.03
RABGGTA-213ENST00000560127 FBXL18Q96ME1 805 aa15.23■□□□□ 0.03
RABGGTA-213ENST00000560127 ZNF287Q9HBT7 754 aa15.23■□□□□ 0.03
RABGGTA-213ENST00000560127 PRR12Q9ULL5 1215 aa15.23■□□□□ 0.03
RABGGTA-213ENST00000560127 LINC01553A4QN01 128 aa15.22■□□□□ 0.03
RABGGTA-213ENST00000560127 GRXCR2A6NFK2 248 aa15.22■□□□□ 0.03
RABGGTA-213ENST00000560127 RAB11FIP3O75154 756 aa15.22■□□□□ 0.03
RABGGTA-213ENST00000560127 TSPY3P0CV98 308 aa15.22■□□□□ 0.03
RABGGTA-213ENST00000560127 TSPY8P0CW00 308 aa15.22■□□□□ 0.03
RABGGTA-213ENST00000560127 BAATQ14032 418 aaPredicted RBP15.22■□□□□ 0.03
RABGGTA-213ENST00000560127 CSPP1Q1MSJ5 1256 aa15.22■□□□□ 0.03
RABGGTA-213ENST00000560127 TCTN1Q2MV58 587 aa15.22■□□□□ 0.03
RABGGTA-213ENST00000560127 LRRFIP1Q32MZ4 808 aaKnown RBP15.22■□□□□ 0.03
RABGGTA-213ENST00000560127 KCTD1Q719H9 257 aa15.22■□□□□ 0.03
RABGGTA-213ENST00000560127 RASGRP2Q7LDG7 609 aa15.22■□□□□ 0.03
RABGGTA-213ENST00000560127 PANK1Q8TE04 598 aa15.22■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms