RNA–Protein interactions for RNA: ENST00000559850.5

RABGGTA-211, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 3

Gene RABGGTA, Length 534 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-211ENST00000559850 TSGA10IPQ3SY00 556 aa17.24■□□□□ 0.35
RABGGTA-211ENST00000559850 DHX32Q7L7V1 743 aaKnown RBP17.24■□□□□ 0.35
RABGGTA-211ENST00000559850 CTCFLQ8NI51 663 aaPredicted RBP17.24■□□□□ 0.35
RABGGTA-211ENST00000559850 JAKMIP1Q96N16 626 aaKnown RBP17.24■□□□□ 0.35
RABGGTA-211ENST00000559850 AMNQ9BXJ7 453 aa17.24■□□□□ 0.35
RABGGTA-211ENST00000559850 SLC12A7Q9Y666 1083 aa17.24■□□□□ 0.35
RABGGTA-211ENST00000559850 KBTBD13C9JR72 458 aa17.23■□□□□ 0.35
RABGGTA-211ENST00000559850 ADAMTS4O75173 837 aa17.23■□□□□ 0.35
RABGGTA-211ENST00000559850 REC8O95072 547 aa17.23■□□□□ 0.35
RABGGTA-211ENST00000559850 LIFRP42702 1097 aa17.23■□□□□ 0.35
RABGGTA-211ENST00000559850 MICU3Q86XE3 530 aa17.23■□□□□ 0.35
RABGGTA-211ENST00000559850 SYTL5Q8TDW5 730 aaPredicted RBP17.23■□□□□ 0.35
RABGGTA-211ENST00000559850 KCNB2Q92953 911 aa17.23■□□□□ 0.35
RABGGTA-211ENST00000559850 TAAR1Q96RJ0 339 aa17.23■□□□□ 0.35
RABGGTA-211ENST00000559850 MTA3Q9BTC8 594 aa17.23■□□□□ 0.35
RABGGTA-211ENST00000559850 ADD3Q9UEY8 706 aaKnown RBP17.23■□□□□ 0.35
RABGGTA-211ENST00000559850 BRPF3Q9ULD4 1205 aa17.23■□□□□ 0.35
RABGGTA-211ENST00000559850 ZMYND8Q9ULU4 1186 aaPredicted RBP17.23■□□□□ 0.35
RABGGTA-211ENST00000559850 MRPL11Q9Y3B7 192 aaKnown RBP17.23■□□□□ 0.35
RABGGTA-211ENST00000559850 PCDHA1Q9Y5I3 950 aa17.23■□□□□ 0.35
RABGGTA-211ENST00000559850 KIAA1217Q5T5P2 1943 aa17.22■□□□□ 0.35
RABGGTA-211ENST00000559850 hCG_1642624A0A1W2PR95 340 aa17.22■□□□□ 0.35
RABGGTA-211ENST00000559850 CFBP00751 764 aa17.22■□□□□ 0.35
RABGGTA-211ENST00000559850 SYN1P17600 705 aa17.22■□□□□ 0.35
RABGGTA-211ENST00000559850 KRT32Q14532 448 aa17.22■□□□□ 0.35
RABGGTA-211ENST00000559850 TAPT1Q6NXT6 567 aa17.22■□□□□ 0.35
RABGGTA-211ENST00000559850 NOL8Q76FK4 1167 aaKnown RBP17.22■□□□□ 0.35
RABGGTA-211ENST00000559850 TMTC2Q8N394 836 aa17.22■□□□□ 0.35
RABGGTA-211ENST00000559850 CCDC82Q8N4S0 544 aa17.22■□□□□ 0.35
RABGGTA-211ENST00000559850 SRBD1Q8N5C6 995 aaKnown RBP17.22■□□□□ 0.35
RABGGTA-211ENST00000559850 MORC4Q8TE76 937 aa17.22■□□□□ 0.35
RABGGTA-211ENST00000559850 DUSP11O75319 330 aaKnown RBP17.21■□□□□ 0.35
RABGGTA-211ENST00000559850 C6orf222P0C671 652 aaPredicted RBP17.21■□□□□ 0.35
RABGGTA-211ENST00000559850 SMPD1P17405 629 aa17.21■□□□□ 0.35
RABGGTA-211ENST00000559850 HOXA13P31271 388 aaPredicted RBP17.21■□□□□ 0.35
RABGGTA-211ENST00000559850 KIF5BP33176 963 aa17.21■□□□□ 0.35
RABGGTA-211ENST00000559850 TNFAIP2Q03169 654 aa17.21■□□□□ 0.35
RABGGTA-211ENST00000559850 RNF180Q86T96 592 aa17.21■□□□□ 0.35
RABGGTA-211ENST00000559850 SGMS1Q86VZ5 419 aa17.21■□□□□ 0.35
RABGGTA-211ENST00000559850 MAP3K14Q99558 947 aa17.21■□□□□ 0.35
RABGGTA-211ENST00000559850 NAP1L2Q9ULW6 460 aaPredicted RBP17.21■□□□□ 0.35
RABGGTA-211ENST00000559850 NR2E3Q9Y5X4 410 aa17.21■□□□□ 0.35
RABGGTA-211ENST00000559850 PNMA6FA0A0J9YX94 578 aa17.2■□□□□ 0.34
RABGGTA-211ENST00000559850 BEX3Q00994 111 aa17.2■□□□□ 0.34
RABGGTA-211ENST00000559850 PDE4DQ08499 809 aa17.2■□□□□ 0.34
RABGGTA-211ENST00000559850 APOA5Q6Q788 366 aa17.2■□□□□ 0.34
RABGGTA-211ENST00000559850 Q6ZUG5 572 aa17.2■□□□□ 0.34
RABGGTA-211ENST00000559850 MCF2L2Q86YR7 1114 aa17.2■□□□□ 0.34
RABGGTA-211ENST00000559850 RGS22Q8NE09 1264 aa17.2■□□□□ 0.34
RABGGTA-211ENST00000559850 SPZ1Q9BXG8 430 aa17.2■□□□□ 0.34
RABGGTA-211ENST00000559850 PHF24Q9UPV7 400 aa17.2■□□□□ 0.34
RABGGTA-211ENST00000559850 KLF18A0A0U1RQI7 1052 aa17.19■□□□□ 0.34
RABGGTA-211ENST00000559850 CALM1P0DP23 149 aa17.19■□□□□ 0.34
RABGGTA-211ENST00000559850 CALM2P0DP24 149 aa17.19■□□□□ 0.34
RABGGTA-211ENST00000559850 CALM3P0DP25 149 aa17.19■□□□□ 0.34
RABGGTA-211ENST00000559850 EIF2AK2P19525 551 aaKnown RBP17.19■□□□□ 0.34
RABGGTA-211ENST00000559850 RTP1P59025 263 aa17.19■□□□□ 0.34
RABGGTA-211ENST00000559850 APOBRQ0VD83 1088 aa17.19■□□□□ 0.34
RABGGTA-211ENST00000559850 KCNA10Q16322 511 aa17.19■□□□□ 0.34
RABGGTA-211ENST00000559850 BLOC1S2Q6QNY1 142 aa17.19■□□□□ 0.34
RABGGTA-211ENST00000559850 CHRDL2Q6WN34 429 aa17.19■□□□□ 0.34
RABGGTA-211ENST00000559850 SLC39A5Q6ZMH5 540 aa17.19■□□□□ 0.34
RABGGTA-211ENST00000559850 TMTC3Q6ZXV5 915 aa17.19■□□□□ 0.34
RABGGTA-211ENST00000559850 FANCBQ8NB91 859 aa17.19■□□□□ 0.34
RABGGTA-211ENST00000559850 KLHDC9Q8NEP7 349 aa17.19■□□□□ 0.34
RABGGTA-211ENST00000559850 RRP36Q96EU6 259 aaKnown RBP17.19■□□□□ 0.34
RABGGTA-211ENST00000559850 USP26Q9BXU7 913 aa17.19■□□□□ 0.34
RABGGTA-211ENST00000559850 VTA1Q9NP79 307 aa17.19■□□□□ 0.34
RABGGTA-211ENST00000559850 ATP11BQ9Y2G3 1177 aa17.19■□□□□ 0.34
RABGGTA-211ENST00000559850 CEP290O15078 2479 aa17.18■□□□□ 0.34
RABGGTA-211ENST00000559850 A0A1W2PQ45 241 aaPredicted RBP17.18■□□□□ 0.34
RABGGTA-211ENST00000559850 A0A1W2PQY0 241 aa17.18■□□□□ 0.34
RABGGTA-211ENST00000559850 CTAGE5O15320 804 aa17.18■□□□□ 0.34
RABGGTA-211ENST00000559850 DYNC1LI2O43237 492 aaPredicted RBP17.18■□□□□ 0.34
RABGGTA-211ENST00000559850 CASTP20810 708 aaKnown RBP17.18■□□□□ 0.34
RABGGTA-211ENST00000559850 RPS6KB1P23443 525 aa17.18■□□□□ 0.34
RABGGTA-211ENST00000559850 EDNRBP24530 442 aa17.18■□□□□ 0.34
RABGGTA-211ENST00000559850 ACLYP53396 1101 aa17.18■□□□□ 0.34
RABGGTA-211ENST00000559850 GJA9P57773 515 aa17.18■□□□□ 0.34
RABGGTA-211ENST00000559850 FGD1P98174 961 aa17.18■□□□□ 0.34
RABGGTA-211ENST00000559850 TRIM60Q495X7 471 aa17.18■□□□□ 0.34
RABGGTA-211ENST00000559850 CCSAPQ6IQ19 270 aaPredicted RBP17.18■□□□□ 0.34
RABGGTA-211ENST00000559850 SYNE3Q6ZMZ3 975 aa17.18■□□□□ 0.34
RABGGTA-211ENST00000559850 TLK2Q86UE8 772 aa17.18■□□□□ 0.34
RABGGTA-211ENST00000559850 DNERQ8NFT8 737 aa17.18■□□□□ 0.34
RABGGTA-211ENST00000559850 ZFP91Q96JP5 570 aaPredicted RBP17.18■□□□□ 0.34
RABGGTA-211ENST00000559850 RMDN3Q96TC7 470 aa17.18■□□□□ 0.34
RABGGTA-211ENST00000559850 UPF3AQ9H1J1 476 aaKnown RBP17.18■□□□□ 0.34
RABGGTA-211ENST00000559850 COLQQ9Y215 455 aaPredicted RBP17.18■□□□□ 0.34
RABGGTA-211ENST00000559850 GNEQ9Y223 722 aaKnown RBP17.18■□□□□ 0.34
RABGGTA-211ENST00000559850 GOLGA8AA7E2F4 631 aa17.17■□□□□ 0.34
RABGGTA-211ENST00000559850 GOLGA8BA8MQT2 603 aa17.17■□□□□ 0.34
RABGGTA-211ENST00000559850 ZBTB43O43298 467 aa17.17■□□□□ 0.34
RABGGTA-211ENST00000559850 HMGB1P09429 215 aaKnown RBP17.17■□□□□ 0.34
RABGGTA-211ENST00000559850 GNAQP50148 359 aa17.17■□□□□ 0.34
RABGGTA-211ENST00000559850 HSD17B4P51659 736 aa17.17■□□□□ 0.34
RABGGTA-211ENST00000559850 RTN1Q16799 776 aa17.17■□□□□ 0.34
RABGGTA-211ENST00000559850 GNASQ5JWF2 1037 aa17.17■□□□□ 0.34
RABGGTA-211ENST00000559850 ARHGEF16Q5VV41 709 aa17.17■□□□□ 0.34
RABGGTA-211ENST00000559850 IQSEC1Q6DN90 963 aa17.17■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms