RNA–Protein interactions for RNA: ENST00000559694.5

CARMIL3-202, Transcript of capping protein regulator and myosin 1 linker 3, humanhuman

TSL 5

Gene CARMIL3, Length 4,319 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CARMIL3-202ENST00000559694 NDUFB10O96000 172 aa11.85□□□□□ -0.51
CARMIL3-202ENST00000559694 IVLP07476 585 aa11.85□□□□□ -0.51
CARMIL3-202ENST00000559694 MAP1SQ66K74 1059 aaPredicted RBP11.85□□□□□ -0.51
CARMIL3-202ENST00000559694 KRBA2Q6ZNG9 492 aa11.85□□□□□ -0.51
CARMIL3-202ENST00000559694 C16orf86Q6ZW13 317 aa11.85□□□□□ -0.51
CARMIL3-202ENST00000559694 ZNF713Q8N859 430 aaPredicted RBP11.85□□□□□ -0.51
CARMIL3-202ENST00000559694 ZNF280CQ8ND82 737 aa11.85□□□□□ -0.51
CARMIL3-202ENST00000559694 PSMD1Q99460 953 aa11.85□□□□□ -0.51
CARMIL3-202ENST00000559694 PCDHA7Q9UN72 937 aa11.85□□□□□ -0.51
CARMIL3-202ENST00000559694 CALRP27797 417 aaKnown RBP11.85□□□□□ -0.51
CARMIL3-202ENST00000559694 CDC25AP30304 524 aa11.85□□□□□ -0.51
CARMIL3-202ENST00000559694 TSGA10IPQ3SY00 556 aa11.85□□□□□ -0.51
CARMIL3-202ENST00000559694 DACT2Q5SW24 774 aa11.85□□□□□ -0.51
CARMIL3-202ENST00000559694 FASTKD5Q7L8L6 764 aaKnown RBP11.85□□□□□ -0.51
CARMIL3-202ENST00000559694 SGMS1Q86VZ5 419 aa11.85□□□□□ -0.51
CARMIL3-202ENST00000559694 UPF1Q92900 1129 aaKnown RBP eCLIP11.85□□□□□ -0.51
CARMIL3-202ENST00000559694 ZKSCAN4Q969J2 545 aaPredicted RBP11.85□□□□□ -0.51
CARMIL3-202ENST00000559694 RIOK1Q9BRS2 568 aaKnown RBP11.85□□□□□ -0.51
CARMIL3-202ENST00000559694 SYT17Q9BSW7 474 aa11.85□□□□□ -0.51
CARMIL3-202ENST00000559694 IMPG2Q9BZV3 1241 aa11.85□□□□□ -0.51
CARMIL3-202ENST00000559694 FTOQ9C0B1 505 aaKnown RBP eCLIP11.85□□□□□ -0.51
CARMIL3-202ENST00000559694 FAM205AQ6ZU69 1335 aa11.85□□□□□ -0.51
CARMIL3-202ENST00000559694 GOLGA6L10A6NI86 522 aa11.85□□□□□ -0.51
CARMIL3-202ENST00000559694 STAT3P40763 770 aa11.85□□□□□ -0.51
CARMIL3-202ENST00000559694 CNNM4Q6P4Q7 775 aa11.85□□□□□ -0.51
CARMIL3-202ENST00000559694 ADGRF4Q8IZF3 695 aa11.85□□□□□ -0.51
CARMIL3-202ENST00000559694 RMDN3Q96TC7 470 aa11.85□□□□□ -0.51
CARMIL3-202ENST00000559694 ZNF215Q9UL58 517 aaPredicted RBP11.85□□□□□ -0.51
CARMIL3-202ENST00000559694 ATRNO75882 1429 aa11.85□□□□□ -0.51
CARMIL3-202ENST00000559694 PFKFB1P16118 471 aa11.85□□□□□ -0.51
CARMIL3-202ENST00000559694 TRAPPC10P48553 1259 aa11.85□□□□□ -0.51
CARMIL3-202ENST00000559694 IGBP1P78318 339 aa11.85□□□□□ -0.51
CARMIL3-202ENST00000559694 STRN3Q13033 797 aa11.85□□□□□ -0.51
CARMIL3-202ENST00000559694 GRM4Q14833 912 aa11.85□□□□□ -0.51
CARMIL3-202ENST00000559694 ADGRA1Q86SQ6 560 aa11.85□□□□□ -0.51
CARMIL3-202ENST00000559694 NELFCDQ8IXH7 590 aa11.85□□□□□ -0.51
CARMIL3-202ENST00000559694 VGLL2Q8N8G2 317 aa11.85□□□□□ -0.51
CARMIL3-202ENST00000559694 GIMAP7Q8NHV1 300 aa11.85□□□□□ -0.51
CARMIL3-202ENST00000559694 RBM46Q8TBY0 533 aaKnown RBP11.85□□□□□ -0.51
CARMIL3-202ENST00000559694 RTFDC1Q9BY42 306 aaPredicted RBP11.85□□□□□ -0.51
CARMIL3-202ENST00000559694 ERCC3P19447 782 aa11.84□□□□□ -0.51
CARMIL3-202ENST00000559694 MNAT1P51948 309 aa11.84□□□□□ -0.51
CARMIL3-202ENST00000559694 CRY2Q49AN0 593 aa11.84□□□□□ -0.51
CARMIL3-202ENST00000559694 NBPF12Q5TAG4 269 aaPredicted RBP11.84□□□□□ -0.51
CARMIL3-202ENST00000559694 IQCEQ6IPM2 695 aa11.84□□□□□ -0.51
CARMIL3-202ENST00000559694 ANO3Q9BYT9 981 aa11.84□□□□□ -0.51
CARMIL3-202ENST00000559694 RNF216Q9NWF9 866 aaPredicted RBP11.84□□□□□ -0.51
CARMIL3-202ENST00000559694 COG2Q14746 738 aa11.84□□□□□ -0.51
CARMIL3-202ENST00000559694 POSTNQ15063 836 aa11.84□□□□□ -0.51
CARMIL3-202ENST00000559694 GPBP1Q86WP2 473 aa11.84□□□□□ -0.51
CARMIL3-202ENST00000559694 ANKRD13AQ8IZ07 590 aa11.84□□□□□ -0.51
CARMIL3-202ENST00000559694 PDLIM2Q96JY6 352 aa11.84□□□□□ -0.51
CARMIL3-202ENST00000559694 FAM107BQ9H098 131 aa11.84□□□□□ -0.51
CARMIL3-202ENST00000559694 WDR19Q8NEZ3 1342 aa11.84□□□□□ -0.51
CARMIL3-202ENST00000559694 DESP17661 470 aa11.84□□□□□ -0.51
CARMIL3-202ENST00000559694 EXOSC10Q01780 885 aaKnown RBP11.84□□□□□ -0.51
CARMIL3-202ENST00000559694 SLC39A14Q15043 492 aa11.84□□□□□ -0.51
CARMIL3-202ENST00000559694 DCAF17Q5H9S7 520 aaPredicted RBP11.84□□□□□ -0.51
CARMIL3-202ENST00000559694 MRPL44Q9H9J2 332 aaKnown RBP11.84□□□□□ -0.51
CARMIL3-202ENST00000559694 VPS18Q9P253 973 aa11.84□□□□□ -0.51
CARMIL3-202ENST00000559694 FBXO40Q9UH90 709 aa11.84□□□□□ -0.51
CARMIL3-202ENST00000559694 DDTLA6NHG4 134 aaPredicted RBP11.83□□□□□ -0.52
CARMIL3-202ENST00000559694 WNT10BO00744 389 aa11.83□□□□□ -0.52
CARMIL3-202ENST00000559694 GCNT3O95395 438 aa11.83□□□□□ -0.52
CARMIL3-202ENST00000559694 GCFC2P16383 781 aaKnown RBP11.83□□□□□ -0.52
CARMIL3-202ENST00000559694 EVCP57679 992 aa11.83□□□□□ -0.52
CARMIL3-202ENST00000559694 PFKFB3Q16875 520 aaPredicted RBP11.83□□□□□ -0.52
CARMIL3-202ENST00000559694 KIAA1524Q8TCG1 905 aa11.83□□□□□ -0.52
CARMIL3-202ENST00000559694 IGDCC4Q8TDY8 1250 aa11.83□□□□□ -0.52
CARMIL3-202ENST00000559694 CTAGE1Q96RT6 745 aa11.83□□□□□ -0.52
CARMIL3-202ENST00000559694 TRIM6Q9C030 488 aaPredicted RBP11.83□□□□□ -0.52
CARMIL3-202ENST00000559694 AP5M1Q9H0R1 490 aa11.83□□□□□ -0.52
CARMIL3-202ENST00000559694 RRAGCQ9HB90 399 aa11.83□□□□□ -0.52
CARMIL3-202ENST00000559694 NYAP2Q9P242 653 aa11.83□□□□□ -0.52
CARMIL3-202ENST00000559694 KIAA1024Q9UPX6 916 aa11.83□□□□□ -0.52
CARMIL3-202ENST00000559694 CACNA1FO60840 1977 aa11.83□□□□□ -0.52
CARMIL3-202ENST00000559694 MRC1P22897 1456 aa11.83□□□□□ -0.52
CARMIL3-202ENST00000559694 KARSQ15046 597 aaKnown RBP11.83□□□□□ -0.52
CARMIL3-202ENST00000559694 FNBP1Q96RU3 617 aa11.83□□□□□ -0.52
CARMIL3-202ENST00000559694 TAF1CQ15572 869 aaPredicted RBP11.83□□□□□ -0.52
CARMIL3-202ENST00000559694 CDHR1Q96JP9 859 aa11.83□□□□□ -0.52
CARMIL3-202ENST00000559694 CLSTN2Q9H4D0 955 aa11.83□□□□□ -0.52
CARMIL3-202ENST00000559694 FRMD4BQ9Y2L6 1034 aa11.83□□□□□ -0.52
CARMIL3-202ENST00000559694 M0QZ92 97 aa11.82□□□□□ -0.52
CARMIL3-202ENST00000559694 BIRC3Q13489 604 aa11.82□□□□□ -0.52
CARMIL3-202ENST00000559694 FAM102BQ5T8I3 360 aa11.82□□□□□ -0.52
CARMIL3-202ENST00000559694 SYMPKQ92797 1274 aaKnown RBP11.82□□□□□ -0.52
CARMIL3-202ENST00000559694 VCPKMTQ9H867 229 aa11.82□□□□□ -0.52
CARMIL3-202ENST00000559694 PCDHB6Q9Y5E3 794 aa11.82□□□□□ -0.52
CARMIL3-202ENST00000559694 KDM3AQ9Y4C1 1321 aa11.82□□□□□ -0.52
CARMIL3-202ENST00000559694 AKR1B10O60218 316 aa11.82□□□□□ -0.52
CARMIL3-202ENST00000559694 CTNND1O60716 968 aaKnown RBP11.82□□□□□ -0.52
CARMIL3-202ENST00000559694 CMA1P23946 247 aa11.82□□□□□ -0.52
CARMIL3-202ENST00000559694 INPP5BP32019 993 aa11.82□□□□□ -0.52
CARMIL3-202ENST00000559694 ARID5AQ03989 594 aa11.82□□□□□ -0.52
CARMIL3-202ENST00000559694 ZNF543Q08ER8 600 aa11.82□□□□□ -0.52
CARMIL3-202ENST00000559694 AMIGO3Q86WK7 504 aa11.82□□□□□ -0.52
CARMIL3-202ENST00000559694 LDHDQ86WU2 507 aa11.82□□□□□ -0.52
CARMIL3-202ENST00000559694 GPC2Q8N158 579 aa11.82□□□□□ -0.52
CARMIL3-202ENST00000559694 NLGN2Q8NFZ4 835 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms