RNA–Protein interactions for RNA: ENST00000559309.5

SNRPA1-207, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 5

Gene SNRPA1, Length 924 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-207ENST00000559309 HOXC6P09630 235 aa17.04■□□□□ 0.32
SNRPA1-207ENST00000559309 NAPAP54920 295 aa17.04■□□□□ 0.32
SNRPA1-207ENST00000559309 GALNT17Q6IS24 598 aa17.04■□□□□ 0.32
SNRPA1-207ENST00000559309 PLEKHH3Q7Z736 793 aa17.04■□□□□ 0.32
SNRPA1-207ENST00000559309 MCF2L2Q86YR7 1114 aa17.04■□□□□ 0.32
SNRPA1-207ENST00000559309 FAM133AQ8N9E0 248 aa17.04■□□□□ 0.32
SNRPA1-207ENST00000559309 CCDC148Q8NFR7 591 aa17.04■□□□□ 0.32
SNRPA1-207ENST00000559309 CCDC12Q8WUD4 166 aaPredicted RBP17.04■□□□□ 0.32
SNRPA1-207ENST00000559309 TNFRSF25Q93038 417 aa17.04■□□□□ 0.32
SNRPA1-207ENST00000559309 ARHGAP39Q9C0H5 1083 aa17.04■□□□□ 0.32
SNRPA1-207ENST00000559309 GLT8D2Q9H1C3 349 aa17.04■□□□□ 0.32
SNRPA1-207ENST00000559309 COL20A1Q9P218 1284 aa17.04■□□□□ 0.32
SNRPA1-207ENST00000559309 TNRC18O15417 2968 aaPredicted RBP17.04■□□□□ 0.32
SNRPA1-207ENST00000559309 PDE4DIPQ5VU43 2346 aa17.03■□□□□ 0.32
SNRPA1-207ENST00000559309 ASTN1O14525 1302 aa17.03■□□□□ 0.32
SNRPA1-207ENST00000559309 PFASO15067 1338 aa17.03■□□□□ 0.32
SNRPA1-207ENST00000559309 SMCO2A6NFE2 343 aa17.03■□□□□ 0.32
SNRPA1-207ENST00000559309 SLC15A5A6NIM6 579 aa17.03■□□□□ 0.32
SNRPA1-207ENST00000559309 FKTNO75072 461 aa17.03■□□□□ 0.32
SNRPA1-207ENST00000559309 MMP1P03956 469 aa17.03■□□□□ 0.32
SNRPA1-207ENST00000559309 RPS6P62753 249 aaKnown RBP17.03■□□□□ 0.32
SNRPA1-207ENST00000559309 KRT40Q6A162 431 aa17.03■□□□□ 0.32
SNRPA1-207ENST00000559309 NCAPG2Q86XI2 1143 aa17.03■□□□□ 0.32
SNRPA1-207ENST00000559309 CRYGNQ8WXF5 182 aa17.03■□□□□ 0.32
SNRPA1-207ENST00000559309 RPTORQ8N122 1335 aa17.02■□□□□ 0.32
SNRPA1-207ENST00000559309 GNRH1P01148 92 aa17.02■□□□□ 0.32
SNRPA1-207ENST00000559309 FCER1AP12319 257 aa17.02■□□□□ 0.32
SNRPA1-207ENST00000559309 ANP32AP39687 249 aaKnown RBP17.02■□□□□ 0.32
SNRPA1-207ENST00000559309 ZNF792Q3KQV3 632 aa17.02■□□□□ 0.32
SNRPA1-207ENST00000559309 SLC30A10Q6XR72 485 aa17.02■□□□□ 0.32
SNRPA1-207ENST00000559309 SYTL5Q8TDW5 730 aaPredicted RBP17.02■□□□□ 0.32
SNRPA1-207ENST00000559309 CUL5Q93034 780 aa17.02■□□□□ 0.32
SNRPA1-207ENST00000559309 PSTPIP2Q9H939 334 aa17.02■□□□□ 0.32
SNRPA1-207ENST00000559309 HOMER2Q9NSB8 354 aa17.02■□□□□ 0.32
SNRPA1-207ENST00000559309 PCDHA4Q9UN74 947 aa17.02■□□□□ 0.32
SNRPA1-207ENST00000559309 DIS3Q9Y2L1 958 aaKnown RBP17.02■□□□□ 0.32
SNRPA1-207ENST00000559309 KIF3AQ9Y496 699 aa17.02■□□□□ 0.32
SNRPA1-207ENST00000559309 LOC102724159A0A0B4J2E5 919 aa17.01■□□□□ 0.31
SNRPA1-207ENST00000559309 COBLO75128 1261 aa17.01■□□□□ 0.31
SNRPA1-207ENST00000559309 CALML3P27482 149 aa17.01■□□□□ 0.31
SNRPA1-207ENST00000559309 GNA11P29992 359 aa17.01■□□□□ 0.31
SNRPA1-207ENST00000559309 PSMC4P43686 418 aa17.01■□□□□ 0.31
SNRPA1-207ENST00000559309 FCGRTP55899 365 aa17.01■□□□□ 0.31
SNRPA1-207ENST00000559309 BAATQ14032 418 aaPredicted RBP17.01■□□□□ 0.31
SNRPA1-207ENST00000559309 PWP2Q15269 919 aaKnown RBP17.01■□□□□ 0.31
SNRPA1-207ENST00000559309 RNF207Q6ZRF8 634 aa17.01■□□□□ 0.31
SNRPA1-207ENST00000559309 MORC4Q8TE76 937 aa17.01■□□□□ 0.31
SNRPA1-207ENST00000559309 ERO1AQ96HE7 468 aa17.01■□□□□ 0.31
SNRPA1-207ENST00000559309 C8orf76Q96K31 380 aa17.01■□□□□ 0.31
SNRPA1-207ENST00000559309 CWC22Q9HCG8 908 aaKnown RBP17.01■□□□□ 0.31
SNRPA1-207ENST00000559309 C6orf50Q9HD87 102 aa17.01■□□□□ 0.31
SNRPA1-207ENST00000559309 KCNJ14Q9UNX9 436 aa17.01■□□□□ 0.31
SNRPA1-207ENST00000559309 HTTP42858 3142 aa17.01■□□□□ 0.31
SNRPA1-207ENST00000559309 GCOM1H8Y6P7 765 aaPredicted RBP17■□□□□ 0.31
SNRPA1-207ENST00000559309 EDIL3O43854 480 aa17■□□□□ 0.31
SNRPA1-207ENST00000559309 POLR2MP0CAP2 368 aa17■□□□□ 0.31
SNRPA1-207ENST00000559309 XBP1P17861 261 aa17■□□□□ 0.31
SNRPA1-207ENST00000559309 PDCP20941 246 aa17■□□□□ 0.31
SNRPA1-207ENST00000559309 SYT1P21579 422 aa17■□□□□ 0.31
SNRPA1-207ENST00000559309 EDNRBP24530 442 aa17■□□□□ 0.31
SNRPA1-207ENST00000559309 U2AF2P26368 475 aaKnown RBP eCLIP17■□□□□ 0.312e-7■■■□□ 14.8
SNRPA1-207ENST00000559309 ADORA2AP29274 412 aa17■□□□□ 0.31
SNRPA1-207ENST00000559309 ADCY7P51828 1080 aa17■□□□□ 0.31
SNRPA1-207ENST00000559309 MRPL12P52815 198 aaKnown RBP17■□□□□ 0.31
SNRPA1-207ENST00000559309 USP17L6PQ6QN14 398 aa17■□□□□ 0.31
SNRPA1-207ENST00000559309 ZNF467Q7Z7K2 595 aaPredicted RBP17■□□□□ 0.31
SNRPA1-207ENST00000559309 BLIDQ8IZY5 108 aa17■□□□□ 0.31
SNRPA1-207ENST00000559309 FAM184AQ8NB25 1140 aa17■□□□□ 0.31
SNRPA1-207ENST00000559309 CD99L2Q8TCZ2 262 aa17■□□□□ 0.31
SNRPA1-207ENST00000559309 MMP19Q99542 508 aa17■□□□□ 0.31
SNRPA1-207ENST00000559309 SOWAHBA6NEL2 793 aa16.99■□□□□ 0.31
SNRPA1-207ENST00000559309 TNPO2O14787 897 aaKnown RBP16.99■□□□□ 0.31
SNRPA1-207ENST00000559309 CFBP00751 764 aa16.99■□□□□ 0.31
SNRPA1-207ENST00000559309 XRCC5P13010 732 aaKnown RBP16.99■□□□□ 0.31
SNRPA1-207ENST00000559309 PDIA4P13667 645 aaKnown RBP16.99■□□□□ 0.31
SNRPA1-207ENST00000559309 MAP2K5Q13163 448 aa16.99■□□□□ 0.31
SNRPA1-207ENST00000559309 AP3B2Q13367 1082 aa16.99■□□□□ 0.31
SNRPA1-207ENST00000559309 IRF5Q13568 498 aa16.99■□□□□ 0.31
SNRPA1-207ENST00000559309 KCTD2Q14681 263 aa16.99■□□□□ 0.31
SNRPA1-207ENST00000559309 LARP1BQ659C4 914 aaKnown RBP16.99■□□□□ 0.31
SNRPA1-207ENST00000559309 MCTP2Q6DN12 878 aa16.99■□□□□ 0.31
SNRPA1-207ENST00000559309 MAMDC4Q6UXC1 1216 aa16.99■□□□□ 0.31
SNRPA1-207ENST00000559309 ANKRD35Q8N283 1001 aa16.99■□□□□ 0.31
SNRPA1-207ENST00000559309 DNERQ8NFT8 737 aa16.99■□□□□ 0.31
SNRPA1-207ENST00000559309 BICD2Q8TD16 824 aa16.99■□□□□ 0.31
SNRPA1-207ENST00000559309 OXER1Q8TDS5 423 aa16.99■□□□□ 0.31
SNRPA1-207ENST00000559309 SOCS4Q8WXH5 440 aa16.99■□□□□ 0.31
SNRPA1-207ENST00000559309 PCDHA6Q9UN73 950 aa16.99■□□□□ 0.31
SNRPA1-207ENST00000559309 PCDHA8Q9Y5H6 950 aa16.99■□□□□ 0.31
SNRPA1-207ENST00000559309 FOSP01100 380 aaPredicted RBP16.98■□□□□ 0.31
SNRPA1-207ENST00000559309 HOXA13P31271 388 aaPredicted RBP16.98■□□□□ 0.31
SNRPA1-207ENST00000559309 SLC4A3P48751 1232 aa16.98■□□□□ 0.31
SNRPA1-207ENST00000559309 NLRP5P59047 1200 aa16.98■□□□□ 0.31
SNRPA1-207ENST00000559309 CNTN2Q02246 1040 aa16.98■□□□□ 0.31
SNRPA1-207ENST00000559309 UBE2SQ16763 222 aa16.98■□□□□ 0.31
SNRPA1-207ENST00000559309 NSMFQ6X4W1 530 aa16.98■□□□□ 0.31
SNRPA1-207ENST00000559309 REXO1Q8N1G1 1221 aaKnown RBP16.98■□□□□ 0.31
SNRPA1-207ENST00000559309 PURBQ96QR8 312 aaKnown RBP16.98■□□□□ 0.31
SNRPA1-207ENST00000559309 TAAR1Q96RJ0 339 aa16.98■□□□□ 0.31
SNRPA1-207ENST00000559309 FOXP1Q9H334 677 aaPredicted RBP16.98■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms