RNA–Protein interactions for RNA: ENST00000558880.1

TRAF3-206, Transcript of TNF receptor associated factor 3, humanhuman

TSL 3

Gene TRAF3, Length 374 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-206ENST00000558880 MCM5P33992 734 aa8.51□□□□□ -1.05
TRAF3-206ENST00000558880 NT5C2P49902 561 aa8.51□□□□□ -1.05
TRAF3-206ENST00000558880 TROAPQ12815 778 aa8.51□□□□□ -1.05
TRAF3-206ENST00000558880 Q6ZUG5 572 aa8.51□□□□□ -1.05
TRAF3-206ENST00000558880 DGKHQ86XP1 1220 aa8.51□□□□□ -1.05
TRAF3-206ENST00000558880 AMOTL1Q8IY63 956 aa8.51□□□□□ -1.05
TRAF3-206ENST00000558880 ANKRD13AQ8IZ07 590 aa8.51□□□□□ -1.05
TRAF3-206ENST00000558880 ZNF592Q92610 1267 aa8.51□□□□□ -1.05
TRAF3-206ENST00000558880 MTA3Q9BTC8 594 aa8.51□□□□□ -1.05
TRAF3-206ENST00000558880 ZNF395Q9H8N7 513 aaPredicted RBP8.51□□□□□ -1.05
TRAF3-206ENST00000558880 ELP3Q9H9T3 547 aa8.51□□□□□ -1.05
TRAF3-206ENST00000558880 GINM1Q9NU53 330 aa8.51□□□□□ -1.05
TRAF3-206ENST00000558880 NYAP2Q9P242 653 aa8.51□□□□□ -1.05
TRAF3-206ENST00000558880 TPCN1Q9ULQ1 816 aa8.51□□□□□ -1.05
TRAF3-206ENST00000558880 KCNH4Q9UQ05 1017 aa8.51□□□□□ -1.05
TRAF3-206ENST00000558880 TMX2Q9Y320 296 aa8.51□□□□□ -1.05
TRAF3-206ENST00000558880 OTOFQ9HC10 1997 aa8.51□□□□□ -1.05
TRAF3-206ENST00000558880 DTNBO60941 627 aa8.5□□□□□ -1.05
TRAF3-206ENST00000558880 SLC3A2P08195 630 aaKnown RBP8.5□□□□□ -1.05
TRAF3-206ENST00000558880 TSPY3P0CV98 308 aa8.5□□□□□ -1.05
TRAF3-206ENST00000558880 TSPY8P0CW00 308 aa8.5□□□□□ -1.05
TRAF3-206ENST00000558880 MCCP23508 829 aa8.5□□□□□ -1.05
TRAF3-206ENST00000558880 LIFRP42702 1097 aa8.5□□□□□ -1.05
TRAF3-206ENST00000558880 SCTRP47872 440 aa8.5□□□□□ -1.05
TRAF3-206ENST00000558880 IREB2P48200 963 aaKnown RBP8.5□□□□□ -1.05
TRAF3-206ENST00000558880 ICA1Q05084 483 aa8.5□□□□□ -1.05
TRAF3-206ENST00000558880 GPAT2Q6NUI2 795 aa8.5□□□□□ -1.05
TRAF3-206ENST00000558880 BLOC1S2Q6QNY1 142 aa8.5□□□□□ -1.05
TRAF3-206ENST00000558880 ARMC9Q7Z3E5 817 aa8.5□□□□□ -1.05
TRAF3-206ENST00000558880 NBPF11Q86T75 865 aa8.5□□□□□ -1.05
TRAF3-206ENST00000558880 LRRC47Q8N1G4 583 aaKnown RBP8.5□□□□□ -1.05
TRAF3-206ENST00000558880 HOOK2Q96ED9 719 aa8.5□□□□□ -1.05
TRAF3-206ENST00000558880 TMEM87BQ96K49 555 aa8.5□□□□□ -1.05
TRAF3-206ENST00000558880 PTPN18Q99952 460 aa8.5□□□□□ -1.05
TRAF3-206ENST00000558880 KANSL2Q9H9L4 492 aa8.5□□□□□ -1.05
TRAF3-206ENST00000558880 ZHX2Q9Y6X8 837 aa8.5□□□□□ -1.05
TRAF3-206ENST00000558880 POM121CA8CG34 1229 aa8.49□□□□□ -1.05
TRAF3-206ENST00000558880 USP17L5A8MUK1 530 aa8.49□□□□□ -1.05
TRAF3-206ENST00000558880 MPHOSPH10O00566 681 aaKnown RBP8.49□□□□□ -1.05
TRAF3-206ENST00000558880 IFIT3O14879 490 aaKnown RBP8.49□□□□□ -1.05
TRAF3-206ENST00000558880 EIF5BO60841 1220 aaKnown RBP8.49□□□□□ -1.05
TRAF3-206ENST00000558880 FKTNO75072 461 aa8.49□□□□□ -1.05
TRAF3-206ENST00000558880 ADH1AP07327 375 aa8.49□□□□□ -1.05
TRAF3-206ENST00000558880 HMGB1P09429 215 aaKnown RBP8.49□□□□□ -1.05
TRAF3-206ENST00000558880 EN2P19622 333 aaPredicted RBP8.49□□□□□ -1.05
TRAF3-206ENST00000558880 PSMA5P28066 241 aa8.49□□□□□ -1.05
TRAF3-206ENST00000558880 PDIA3P30101 505 aaKnown RBP8.49□□□□□ -1.05
TRAF3-206ENST00000558880 CDC27P30260 824 aa8.49□□□□□ -1.05
TRAF3-206ENST00000558880 NEK4P51957 841 aa8.49□□□□□ -1.05
TRAF3-206ENST00000558880 PPATQ06203 517 aa8.49□□□□□ -1.05
TRAF3-206ENST00000558880 APOBRQ0VD83 1088 aa8.49□□□□□ -1.05
TRAF3-206ENST00000558880 SPP2Q13103 211 aa8.49□□□□□ -1.05
TRAF3-206ENST00000558880 SEMA3FQ13275 785 aa8.49□□□□□ -1.05
TRAF3-206ENST00000558880 PPIL2Q13356 520 aa8.49□□□□□ -1.05
TRAF3-206ENST00000558880 RAB3GAP1Q15042 981 aa8.49□□□□□ -1.05
TRAF3-206ENST00000558880 RABEP1Q15276 862 aa8.49□□□□□ -1.05
TRAF3-206ENST00000558880 ME3Q16798 604 aa8.49□□□□□ -1.05
TRAF3-206ENST00000558880 RALYLQ86SE5 291 aaKnown RBP8.49□□□□□ -1.05
TRAF3-206ENST00000558880 ERO1BQ86YB8 467 aa8.49□□□□□ -1.05
TRAF3-206ENST00000558880 RAB11FIP4Q86YS3 637 aa8.49□□□□□ -1.05
TRAF3-206ENST00000558880 ZNF280CQ8ND82 737 aa8.49□□□□□ -1.05
TRAF3-206ENST00000558880 BRF1Q92994 677 aa8.49□□□□□ -1.05
TRAF3-206ENST00000558880 OPTNQ96CV9 577 aa8.49□□□□□ -1.05
TRAF3-206ENST00000558880 WNK4Q96J92 1243 aa8.49□□□□□ -1.05
TRAF3-206ENST00000558880 C12orf42Q96LP6 360 aa8.49□□□□□ -1.05
TRAF3-206ENST00000558880 MYL10Q9BUA6 226 aa8.49□□□□□ -1.05
TRAF3-206ENST00000558880 KIAA1683Q9H0B3 1180 aa8.49□□□□□ -1.05
TRAF3-206ENST00000558880 ZNF287Q9HBT7 754 aa8.49□□□□□ -1.05
TRAF3-206ENST00000558880 TOMM22Q9NS69 142 aa8.49□□□□□ -1.05
TRAF3-206ENST00000558880 PDRG1Q9NUG6 133 aa8.49□□□□□ -1.05
TRAF3-206ENST00000558880 CLIP2Q9UDT6 1046 aa8.49□□□□□ -1.05
TRAF3-206ENST00000558880 TRIM17Q9Y577 477 aa8.49□□□□□ -1.05
TRAF3-206ENST00000558880 CYP46A1Q9Y6A2 500 aa8.49□□□□□ -1.05
TRAF3-206ENST00000558880 NID2Q14112 1375 aa8.48□□□□□ -1.05
TRAF3-206ENST00000558880 PHIPQ8WWQ0 1821 aa8.48□□□□□ -1.05
TRAF3-206ENST00000558880 A0A0G2JLL6 359 aaPredicted RBP8.48□□□□□ -1.05
TRAF3-206ENST00000558880 FIGNL2A6NMB9 653 aa8.48□□□□□ -1.05
TRAF3-206ENST00000558880 F5H6K3 240 aa8.48□□□□□ -1.05
TRAF3-206ENST00000558880 CYTH3O43739 400 aa8.48□□□□□ -1.05
TRAF3-206ENST00000558880 MAN1A2O60476 641 aa8.48□□□□□ -1.05
TRAF3-206ENST00000558880 CTDNEP1O95476 244 aa8.48□□□□□ -1.05
TRAF3-206ENST00000558880 TTLL1O95922 423 aa8.48□□□□□ -1.05
TRAF3-206ENST00000558880 NDUFB10O96000 172 aa8.48□□□□□ -1.05
TRAF3-206ENST00000558880 PDHBP11177 359 aa8.48□□□□□ -1.05
TRAF3-206ENST00000558880 TOP1P11387 765 aaKnown RBP8.48□□□□□ -1.05
TRAF3-206ENST00000558880 RXRAP19793 462 aa8.48□□□□□ -1.05
TRAF3-206ENST00000558880 NF2P35240 595 aa8.48□□□□□ -1.05
TRAF3-206ENST00000558880 BACE1P56817 501 aa8.48□□□□□ -1.05
TRAF3-206ENST00000558880 KLRC3Q07444 240 aa8.48□□□□□ -1.05
TRAF3-206ENST00000558880 TRDNQ13061 729 aa8.48□□□□□ -1.05
TRAF3-206ENST00000558880 NTRK3Q16288 839 aa8.48□□□□□ -1.05
TRAF3-206ENST00000558880 TMEM67Q5HYA8 995 aa8.48□□□□□ -1.05
TRAF3-206ENST00000558880 APOA5Q6Q788 366 aa8.48□□□□□ -1.05
TRAF3-206ENST00000558880 PRRT2Q7Z6L0 340 aaPredicted RBP8.48□□□□□ -1.05
TRAF3-206ENST00000558880 RNF135Q8IUD6 432 aa8.48□□□□□ -1.05
TRAF3-206ENST00000558880 STAG2Q8N3U4 1231 aa8.48□□□□□ -1.05
TRAF3-206ENST00000558880 GMCL1P1Q8NEA9 526 aa8.48□□□□□ -1.05
TRAF3-206ENST00000558880 BRI3BPQ8WY22 251 aa8.48□□□□□ -1.05
TRAF3-206ENST00000558880 SHISA4Q96DD7 197 aa8.48□□□□□ -1.05
TRAF3-206ENST00000558880 INSM2Q96T92 566 aaPredicted RBP8.48□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms