RNA–Protein interactions for RNA: ENST00000558795.1

CPNE6-208, Transcript of copine 6, humanhuman

TSL 2

Gene CPNE6, Length 1,226 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE6-208ENST00000558795 SKIV2LQ15477 1246 aaKnown RBP18.12■□□□□ 0.49
CPNE6-208ENST00000558795 CCDC96Q2M329 555 aa18.12■□□□□ 0.49
CPNE6-208ENST00000558795 TMEM63BQ5T3F8 832 aa18.12■□□□□ 0.49
CPNE6-208ENST00000558795 FSD1Q9BTV5 496 aa18.12■□□□□ 0.49
CPNE6-208ENST00000558795 DCTPP1Q9H773 170 aa18.12■□□□□ 0.49
CPNE6-208ENST00000558795 LCTP09848 1927 aa18.11■□□□□ 0.49
CPNE6-208ENST00000558795 CHD9Q3L8U1 2897 aa18.11■□□□□ 0.49
CPNE6-208ENST00000558795 ERC2O15083 957 aa18.11■□□□□ 0.49
CPNE6-208ENST00000558795 ICAM1P05362 532 aa18.11■□□□□ 0.49
CPNE6-208ENST00000558795 CPT1AP50416 773 aa18.11■□□□□ 0.49
CPNE6-208ENST00000558795 AAK1Q2M2I8 961 aa18.11■□□□□ 0.49
CPNE6-208ENST00000558795 DUSP28Q4G0W2 176 aa18.11■□□□□ 0.49
CPNE6-208ENST00000558795 TMEM67Q5HYA8 995 aa18.11■□□□□ 0.49
CPNE6-208ENST00000558795 DEFB128Q7Z7B8 93 aa18.11■□□□□ 0.49
CPNE6-208ENST00000558795 MORC4Q8TE76 937 aa18.11■□□□□ 0.49
CPNE6-208ENST00000558795 WDR11Q9BZH6 1224 aa18.11■□□□□ 0.49
CPNE6-208ENST00000558795 RWDD1Q9H446 243 aaPredicted RBP18.11■□□□□ 0.49
CPNE6-208ENST00000558795 GPHNQ9NQX3 736 aaPredicted RBP18.11■□□□□ 0.49
CPNE6-208ENST00000558795 TRMT13Q9NUP7 481 aaKnown RBP18.11■□□□□ 0.49
CPNE6-208ENST00000558795 RAPGEFL1Q9UHV5 662 aa18.11■□□□□ 0.49
CPNE6-208ENST00000558795 TNKSO95271 1327 aa18.11■□□□□ 0.49
CPNE6-208ENST00000558795 TCF20Q9UGU0 1960 aaKnown RBP18.1■□□□□ 0.49
CPNE6-208ENST00000558795 TTC41PQ6P2S7 1318 aa18.1■□□□□ 0.49
CPNE6-208ENST00000558795 MYL3P08590 195 aa18.1■□□□□ 0.49
CPNE6-208ENST00000558795 CYP2C9P11712 490 aa18.1■□□□□ 0.49
CPNE6-208ENST00000558795 ACTN1P12814 892 aa18.1■□□□□ 0.49
CPNE6-208ENST00000558795 HDAC1Q13547 482 aaPredicted RBP18.1■□□□□ 0.49
CPNE6-208ENST00000558795 TTLL4Q14679 1199 aa18.1■□□□□ 0.49
CPNE6-208ENST00000558795 FAM47CQ5HY64 1035 aa18.1■□□□□ 0.49
CPNE6-208ENST00000558795 PURBQ96QR8 312 aaKnown RBP18.1■□□□□ 0.49
CPNE6-208ENST00000558795 MUC3AQ02505 3323 aa18.1■□□□□ 0.49
CPNE6-208ENST00000558795 PTPDC1A2A3K4 754 aa18.09■□□□□ 0.49
CPNE6-208ENST00000558795 GTPBP6O43824 516 aaPredicted RBP18.09■□□□□ 0.49
CPNE6-208ENST00000558795 RANBP6O60518 1105 aaKnown RBP18.09■□□□□ 0.49
CPNE6-208ENST00000558795 NMT2O60551 498 aa18.09■□□□□ 0.49
CPNE6-208ENST00000558795 ALDH5A1P51649 535 aaPredicted RBP18.09■□□□□ 0.49
CPNE6-208ENST00000558795 PURAQ00577 322 aaKnown RBP18.09■□□□□ 0.49
CPNE6-208ENST00000558795 CTDSPL2Q05D32 466 aa18.09■□□□□ 0.49
CPNE6-208ENST00000558795 BAATQ14032 418 aaPredicted RBP18.09■□□□□ 0.49
CPNE6-208ENST00000558795 BRDTQ58F21 947 aaPredicted RBP18.09■□□□□ 0.49
CPNE6-208ENST00000558795 ZMYM1Q5SVZ6 1142 aa18.09■□□□□ 0.49
CPNE6-208ENST00000558795 RASGRP2Q7LDG7 609 aa18.09■□□□□ 0.49
CPNE6-208ENST00000558795 OR6J1Q8NGC5 347 aa18.09■□□□□ 0.49
CPNE6-208ENST00000558795 DCAF4Q8WV16 495 aa18.09■□□□□ 0.49
CPNE6-208ENST00000558795 MTG1Q9BT17 334 aaPredicted RBP18.09■□□□□ 0.49
CPNE6-208ENST00000558795 IL17RBQ9NRM6 502 aa18.09■□□□□ 0.49
CPNE6-208ENST00000558795 DDX52Q9Y2R4 599 aaKnown RBP eCLIP18.09■□□□□ 0.49
CPNE6-208ENST00000558795 SCN5AQ14524 2016 aa18.08■□□□□ 0.49
CPNE6-208ENST00000558795 RAD50Q92878 1312 aa18.08■□□□□ 0.49
CPNE6-208ENST00000558795 LOC102724159A0A0B4J2E5 919 aa18.08■□□□□ 0.48
CPNE6-208ENST00000558795 CA3P07451 260 aa18.08■□□□□ 0.48
CPNE6-208ENST00000558795 TFF2Q03403 129 aa18.08■□□□□ 0.48
CPNE6-208ENST00000558795 PWP2Q15269 919 aaKnown RBP18.08■□□□□ 0.48
CPNE6-208ENST00000558795 VWCEQ96DN2 955 aa18.08■□□□□ 0.48
CPNE6-208ENST00000558795 NECAB3Q96P71 396 aaPredicted RBP18.08■□□□□ 0.48
CPNE6-208ENST00000558795 RANBP17Q9H2T7 1088 aaKnown RBP18.08■□□□□ 0.48
CPNE6-208ENST00000558795 NFIBO00712 420 aa18.07■□□□□ 0.48
CPNE6-208ENST00000558795 BMP1P13497 986 aa18.07■□□□□ 0.48
CPNE6-208ENST00000558795 RFC2P35250 354 aa18.07■□□□□ 0.48
CPNE6-208ENST00000558795 SYDE2Q5VT97 1194 aa18.07■□□□□ 0.48
CPNE6-208ENST00000558795 RETREG2Q8NC44 543 aa18.07■□□□□ 0.48
CPNE6-208ENST00000558795 SLC9A7Q96T83 725 aa18.07■□□□□ 0.48
CPNE6-208ENST00000558795 MPHOSPH6Q99547 160 aaKnown RBP18.07■□□□□ 0.48
CPNE6-208ENST00000558795 CERS4Q9HA82 394 aa18.07■□□□□ 0.48
CPNE6-208ENST00000558795 INCENPQ9NQS7 918 aa18.07■□□□□ 0.48
CPNE6-208ENST00000558795 RFXAPO00287 272 aa18.06■□□□□ 0.48
CPNE6-208ENST00000558795 CALML3P27482 149 aa18.06■□□□□ 0.48
CPNE6-208ENST00000558795 SLC16A2P36021 539 aa18.06■□□□□ 0.48
CPNE6-208ENST00000558795 PDE4DQ08499 809 aa18.06■□□□□ 0.48
CPNE6-208ENST00000558795 PPP2R5BQ15173 497 aa18.06■□□□□ 0.48
CPNE6-208ENST00000558795 TTBK2Q6IQ55 1244 aa18.06■□□□□ 0.48
CPNE6-208ENST00000558795 PI4K2BQ8TCG2 481 aa18.06■□□□□ 0.48
CPNE6-208ENST00000558795 C1QTNF1Q9BXJ1 281 aa18.06■□□□□ 0.48
CPNE6-208ENST00000558795 FTOQ9C0B1 505 aaKnown RBP eCLIP18.06■□□□□ 0.48
CPNE6-208ENST00000558795 TOMM22Q9NS69 142 aa18.06■□□□□ 0.48
CPNE6-208ENST00000558795 MTCH2Q9Y6C9 303 aa18.06■□□□□ 0.48
CPNE6-208ENST00000558795 TANC1Q9C0D5 1861 aa18.05■□□□□ 0.48
CPNE6-208ENST00000558795 PRRC2BQ5JSZ5 2229 aaKnown RBP18.05■□□□□ 0.48
CPNE6-208ENST00000558795 SCN10AQ9Y5Y9 1956 aa18.05■□□□□ 0.48
CPNE6-208ENST00000558795 RBM47A0AV96 593 aaKnown RBP18.05■□□□□ 0.48
CPNE6-208ENST00000558795 NKRFO15226 690 aaKnown RBP eCLIP18.05■□□□□ 0.48
CPNE6-208ENST00000558795 KPNA6O60684 536 aa18.05■□□□□ 0.48
CPNE6-208ENST00000558795 POU3F3P20264 500 aaPredicted RBP18.05■□□□□ 0.48
CPNE6-208ENST00000558795 KCNQ1P51787 676 aa18.05■□□□□ 0.48
CPNE6-208ENST00000558795 NBPF20Q3BBV1 942 aa18.05■□□□□ 0.48
CPNE6-208ENST00000558795 BTNL9Q6UXG8 535 aa18.05■□□□□ 0.48
CPNE6-208ENST00000558795 SLC30A10Q6XR72 485 aa18.05■□□□□ 0.48
CPNE6-208ENST00000558795 PHOSPHO2Q8TCD6 241 aa18.05■□□□□ 0.48
CPNE6-208ENST00000558795 FAM122AQ96E09 287 aa18.05■□□□□ 0.48
CPNE6-208ENST00000558795 PNMA2Q9UL42 364 aa18.05■□□□□ 0.48
CPNE6-208ENST00000558795 NOD1Q9Y239 953 aa18.05■□□□□ 0.48
CPNE6-208ENST00000558795 BDP1A6H8Y1 2624 aa18.05■□□□□ 0.48
CPNE6-208ENST00000558795 FRMPD2Q68DX3 1309 aaPredicted RBP18.04■□□□□ 0.48
CPNE6-208ENST00000558795 KIF28PB7ZC32 967 aa18.04■□□□□ 0.48
CPNE6-208ENST00000558795 PITPNM1O00562 1244 aa18.04■□□□□ 0.48
CPNE6-208ENST00000558795 TOP1P11387 765 aaKnown RBP18.04■□□□□ 0.48
CPNE6-208ENST00000558795 PLA2G5P39877 138 aa18.04■□□□□ 0.48
CPNE6-208ENST00000558795 NFRKBQ6P4R8 1299 aa18.04■□□□□ 0.48
CPNE6-208ENST00000558795 RNF207Q6ZRF8 634 aa18.04■□□□□ 0.48
CPNE6-208ENST00000558795 SCFD2Q8WU76 684 aa18.04■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms