RNA–Protein interactions for RNA: ENST00000558575.1

LINC01220-201, Transcript of long intergenic non-protein coding RNA 1220, humanhuman

TSL 1 (best) BASIC

Gene LINC01220, Length 715 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01220-201ENST00000558575 C22orf23Q9BZE7 217 aa18.05■□□□□ 0.48
LINC01220-201ENST00000558575 FAM217BQ9NTX9 383 aaPredicted RBP18.05■□□□□ 0.48
LINC01220-201ENST00000558575 A0A0G2JMZ2 1700 aa18.05■□□□□ 0.48
LINC01220-201ENST00000558575 MSCO60682 206 aa18.04■□□□□ 0.48
LINC01220-201ENST00000558575 DNAJB2P25686 324 aa18.04■□□□□ 0.48
LINC01220-201ENST00000558575 RBM25P49756 843 aaKnown RBP18.04■□□□□ 0.48
LINC01220-201ENST00000558575 OAZ1P54368 228 aa18.04■□□□□ 0.48
LINC01220-201ENST00000558575 CCDC174Q6PII3 467 aa18.04■□□□□ 0.48
LINC01220-201ENST00000558575 CCDC144CPQ8IYA2 1237 aa18.04■□□□□ 0.48
LINC01220-201ENST00000558575 FANCBQ8NB91 859 aa18.04■□□□□ 0.48
LINC01220-201ENST00000558575 ATXN2LQ8WWM7 1075 aaKnown RBP18.04■□□□□ 0.48
LINC01220-201ENST00000558575 PPM1EQ8WY54 764 aa18.04■□□□□ 0.48
LINC01220-201ENST00000558575 MTMR8Q96EF0 704 aa18.04■□□□□ 0.48
LINC01220-201ENST00000558575 LARP6Q9BRS8 491 aaKnown RBP18.04■□□□□ 0.48
LINC01220-201ENST00000558575 TEX13BQ9BXU2 312 aa18.04■□□□□ 0.48
LINC01220-201ENST00000558575 RIOX1Q9H6W3 641 aa18.04■□□□□ 0.48
LINC01220-201ENST00000558575 VAT1LQ9HCJ6 419 aa18.04■□□□□ 0.48
LINC01220-201ENST00000558575 PDRG1Q9NUG6 133 aa18.04■□□□□ 0.48
LINC01220-201ENST00000558575 MUC6Q6W4X9 2439 aa18.03■□□□□ 0.48
LINC01220-201ENST00000558575 KLF18A0A0U1RQI7 1052 aa18.03■□□□□ 0.48
LINC01220-201ENST00000558575 PLEKHA8P1O95397 391 aa18.03■□□□□ 0.48
LINC01220-201ENST00000558575 PTPREP23469 700 aa18.03■□□□□ 0.48
LINC01220-201ENST00000558575 CYP2C19P33261 490 aa18.03■□□□□ 0.48
LINC01220-201ENST00000558575 SNRNP48Q6IEG0 339 aaKnown RBP18.03■□□□□ 0.48
LINC01220-201ENST00000558575 NCAPG2Q86XI2 1143 aa18.03■□□□□ 0.48
LINC01220-201ENST00000558575 CCAR1Q8IX12 1150 aaKnown RBP18.03■□□□□ 0.48
LINC01220-201ENST00000558575 SRBD1Q8N5C6 995 aaKnown RBP18.03■□□□□ 0.48
LINC01220-201ENST00000558575 NPLOC4Q8TAT6 608 aa18.03■□□□□ 0.48
LINC01220-201ENST00000558575 UHRF1Q96T88 793 aaPredicted RBP18.03■□□□□ 0.48
LINC01220-201ENST00000558575 ALDH8A1Q9H2A2 487 aaPredicted RBP18.03■□□□□ 0.48
LINC01220-201ENST00000558575 MROH8Q9H579 483 aa18.03■□□□□ 0.48
LINC01220-201ENST00000558575 THEGQ9P2T0 379 aa18.03■□□□□ 0.48
LINC01220-201ENST00000558575 SLC25A27O95847 323 aa18.02■□□□□ 0.48
LINC01220-201ENST00000558575 IGHA2P01877 340 aa18.02■□□□□ 0.48
LINC01220-201ENST00000558575 CYBAP13498 195 aa18.02■□□□□ 0.48
LINC01220-201ENST00000558575 SLC4A3P48751 1232 aa18.02■□□□□ 0.48
LINC01220-201ENST00000558575 FGD1P98174 961 aa18.02■□□□□ 0.48
LINC01220-201ENST00000558575 ANO1Q5XXA6 986 aa18.02■□□□□ 0.48
LINC01220-201ENST00000558575 MICU3Q86XE3 530 aa18.02■□□□□ 0.48
LINC01220-201ENST00000558575 CMTR1Q8N1G2 835 aaKnown RBP18.02■□□□□ 0.48
LINC01220-201ENST00000558575 ZNF576Q9H609 170 aa18.02■□□□□ 0.48
LINC01220-201ENST00000558575 SYNGAP1Q96PV0 1343 aa18.01■□□□□ 0.47
LINC01220-201ENST00000558575 COL11A1P12107 1806 aaPredicted RBP18.01■□□□□ 0.47
LINC01220-201ENST00000558575 ZBTB43O43298 467 aa18.01■□□□□ 0.47
LINC01220-201ENST00000558575 PPP1R11O60927 126 aaPredicted RBP18.01■□□□□ 0.47
LINC01220-201ENST00000558575 ICAM1P05362 532 aa18.01■□□□□ 0.47
LINC01220-201ENST00000558575 CALM1P0DP23 149 aa18.01■□□□□ 0.47
LINC01220-201ENST00000558575 CALM2P0DP24 149 aa18.01■□□□□ 0.47
LINC01220-201ENST00000558575 CALM3P0DP25 149 aa18.01■□□□□ 0.47
LINC01220-201ENST00000558575 PDIA3P30101 505 aaKnown RBP18.01■□□□□ 0.47
LINC01220-201ENST00000558575 CDC27P30260 824 aa18.01■□□□□ 0.47
LINC01220-201ENST00000558575 FUT2Q10981 343 aa18.01■□□□□ 0.47
LINC01220-201ENST00000558575 CTCFLQ8NI51 663 aaPredicted RBP18.01■□□□□ 0.47
LINC01220-201ENST00000558575 CTDP1Q9Y5B0 961 aaPredicted RBP18.01■□□□□ 0.47
LINC01220-201ENST00000558575 BAZ2BQ9UIF8 2168 aaKnown RBP18■□□□□ 0.47
LINC01220-201ENST00000558575 SLC15A5A6NIM6 579 aa18■□□□□ 0.47
LINC01220-201ENST00000558575 HOXC6P09630 235 aa18■□□□□ 0.47
LINC01220-201ENST00000558575 SMARCA1P28370 1054 aa18■□□□□ 0.47
LINC01220-201ENST00000558575 KIF5BP33176 963 aa18■□□□□ 0.47
LINC01220-201ENST00000558575 ADD1P35611 737 aaKnown RBP18■□□□□ 0.47
LINC01220-201ENST00000558575 GRB14Q14449 540 aa18■□□□□ 0.47
LINC01220-201ENST00000558575 CDC37Q16543 378 aaPredicted RBP18■□□□□ 0.47
LINC01220-201ENST00000558575 QRICH1Q2TAL8 776 aa18■□□□□ 0.47
LINC01220-201ENST00000558575 MUM1L1Q5H9M0 696 aa18■□□□□ 0.47
LINC01220-201ENST00000558575 WDR78Q5VTH9 848 aa18■□□□□ 0.47
LINC01220-201ENST00000558575 SYNE3Q6ZMZ3 975 aa18■□□□□ 0.47
LINC01220-201ENST00000558575 TMTC3Q6ZXV5 915 aa18■□□□□ 0.47
LINC01220-201ENST00000558575 NECAB3Q96P71 396 aaPredicted RBP18■□□□□ 0.47
LINC01220-201ENST00000558575 PIGSQ96S52 555 aa18■□□□□ 0.47
LINC01220-201ENST00000558575 CHD7Q9P2D1 2997 aa18■□□□□ 0.47
LINC01220-201ENST00000558575 KBTBD13C9JR72 458 aa17.99■□□□□ 0.47
LINC01220-201ENST00000558575 STRNO43815 780 aa17.99■□□□□ 0.47
LINC01220-201ENST00000558575 COBLO75128 1261 aa17.99■□□□□ 0.47
LINC01220-201ENST00000558575 ALAS1P13196 640 aa17.99■□□□□ 0.47
LINC01220-201ENST00000558575 GNAQP50148 359 aa17.99■□□□□ 0.47
LINC01220-201ENST00000558575 NEK4P51957 841 aa17.99■□□□□ 0.47
LINC01220-201ENST00000558575 RCAN1P53805 252 aa17.99■□□□□ 0.47
LINC01220-201ENST00000558575 AK2P54819 239 aa17.99■□□□□ 0.47
LINC01220-201ENST00000558575 TLE2Q04725 743 aa17.99■□□□□ 0.47
LINC01220-201ENST00000558575 DHX30Q7L2E3 1194 aaKnown RBP eCLIP17.99■□□□□ 0.47
LINC01220-201ENST00000558575 ARRDC4Q8NCT1 418 aa17.99■□□□□ 0.47
LINC01220-201ENST00000558575 CHST13Q8NET6 341 aa17.99■□□□□ 0.47
LINC01220-201ENST00000558575 CLEC4DQ8WXI8 215 aa17.99■□□□□ 0.47
LINC01220-201ENST00000558575 FERMT2Q96AC1 680 aa17.99■□□□□ 0.47
LINC01220-201ENST00000558575 TBC1D32Q96NH3 1257 aa17.99■□□□□ 0.47
LINC01220-201ENST00000558575 TRERF1Q96PN7 1200 aa17.99■□□□□ 0.47
LINC01220-201ENST00000558575 SPZ1Q9BXG8 430 aa17.99■□□□□ 0.47
LINC01220-201ENST00000558575 CWC22Q9HCG8 908 aaKnown RBP17.99■□□□□ 0.47
LINC01220-201ENST00000558575 CCPG1Q9ULG6 757 aa17.99■□□□□ 0.47
LINC01220-201ENST00000558575 GOLGA8AA7E2F4 631 aa17.98■□□□□ 0.47
LINC01220-201ENST00000558575 GOLGA8BA8MQT2 603 aa17.98■□□□□ 0.47
LINC01220-201ENST00000558575 DHX16O60231 1041 aaKnown RBP17.98■□□□□ 0.47
LINC01220-201ENST00000558575 COPB2P35606 906 aa17.98■□□□□ 0.47
LINC01220-201ENST00000558575 ADCYAP1R1P41586 468 aa17.98■□□□□ 0.47
LINC01220-201ENST00000558575 MRPS5P82675 430 aaKnown RBP17.98■□□□□ 0.47
LINC01220-201ENST00000558575 RTN1Q16799 776 aa17.98■□□□□ 0.47
LINC01220-201ENST00000558575 TKFCQ3LXA3 575 aa17.98■□□□□ 0.47
LINC01220-201ENST00000558575 C1orf53Q5VUE5 145 aa17.98■□□□□ 0.47
LINC01220-201ENST00000558575 CCDC82Q8N4S0 544 aa17.98■□□□□ 0.47
LINC01220-201ENST00000558575 TIFAQ96CG3 184 aa17.98■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 78 ms