RNA–Protein interactions for RNA: ENST00000558561.1

SPG11-211, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 555 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-211ENST00000558561 KIAA0825Q8IV33 1275 aa5.56□□□□□ -1.52
SPG11-211ENST00000558561 RTF1Q92541 710 aaKnown RBP5.56□□□□□ -1.52
SPG11-211ENST00000558561 EZH1Q92800 747 aaPredicted RBP5.56□□□□□ -1.52
SPG11-211ENST00000558561 RUNDC1Q96C34 613 aa5.56□□□□□ -1.52
SPG11-211ENST00000558561 ACBD3Q9H3P7 528 aa5.56□□□□□ -1.52
SPG11-211ENST00000558561 SSU72Q9NP77 194 aaKnown RBP5.56□□□□□ -1.52
SPG11-211ENST00000558561 N4BP2Q86UW6 1770 aaPredicted RBP5.55□□□□□ -1.52
SPG11-211ENST00000558561 UBR2Q8IWV8 1755 aa5.55□□□□□ -1.52
SPG11-211ENST00000558561 SOS1Q07889 1333 aaPredicted RBP5.55□□□□□ -1.52
SPG11-211ENST00000558561 CNTNAP4Q9C0A0 1308 aa5.55□□□□□ -1.52
SPG11-211ENST00000558561 ELL2O00472 640 aaPredicted RBP5.55□□□□□ -1.52
SPG11-211ENST00000558561 TCERG1O14776 1098 aaKnown RBP5.55□□□□□ -1.52
SPG11-211ENST00000558561 GRIN3BO60391 1043 aa5.55□□□□□ -1.52
SPG11-211ENST00000558561 DPEP1P16444 411 aa5.55□□□□□ -1.52
SPG11-211ENST00000558561 EIF2S2P20042 333 aaKnown RBP5.55□□□□□ -1.52
SPG11-211ENST00000558561 CHRNA5P30532 468 aa5.55□□□□□ -1.52
SPG11-211ENST00000558561 GRK4P32298 578 aa5.55□□□□□ -1.52
SPG11-211ENST00000558561 ETF1P62495 437 aaKnown RBP5.55□□□□□ -1.52
SPG11-211ENST00000558561 NFIXQ14938 502 aa5.55□□□□□ -1.52
SPG11-211ENST00000558561 SEZ6Q53EL9 994 aa5.55□□□□□ -1.52
SPG11-211ENST00000558561 TBC1D9BQ66K14 1250 aa5.55□□□□□ -1.52
SPG11-211ENST00000558561 PAOXQ6QHF9 649 aa5.55□□□□□ -1.52
SPG11-211ENST00000558561 PHF6Q8IWS0 365 aaKnown RBP eCLIP5.55□□□□□ -1.52
SPG11-211ENST00000558561 FAM9BQ8IZU0 186 aa5.55□□□□□ -1.52
SPG11-211ENST00000558561 SHISA5Q8N114 240 aa5.55□□□□□ -1.52
SPG11-211ENST00000558561 YIPF2Q9BWQ6 316 aa5.55□□□□□ -1.52
SPG11-211ENST00000558561 NT5C1AQ9BXI3 368 aa5.55□□□□□ -1.52
SPG11-211ENST00000558561 WNT10AQ9GZT5 417 aa5.55□□□□□ -1.52
SPG11-211ENST00000558561 SEMA6BQ9H3T3 888 aa5.55□□□□□ -1.52
SPG11-211ENST00000558561 NARFQ9UHQ1 456 aa5.55□□□□□ -1.52
SPG11-211ENST00000558561 POLR3KQ9Y2Y1 108 aaPredicted RBP5.55□□□□□ -1.52
SPG11-211ENST00000558561 CORINQ9Y5Q5 1042 aa5.55□□□□□ -1.52
SPG11-211ENST00000558561 MRC1P22897 1456 aa5.54□□□□□ -1.52
SPG11-211ENST00000558561 AFDNP55196 1824 aaKnown RBP5.54□□□□□ -1.52
SPG11-211ENST00000558561 POLRMTO00411 1230 aaKnown RBP5.54□□□□□ -1.52
SPG11-211ENST00000558561 CHL1O00533 1208 aa5.54□□□□□ -1.52
SPG11-211ENST00000558561 HTATSF1O43719 755 aaKnown RBP5.54□□□□□ -1.52
SPG11-211ENST00000558561 MYL6BP14649 208 aa5.54□□□□□ -1.52
SPG11-211ENST00000558561 POLD1P28340 1107 aa5.54□□□□□ -1.52
SPG11-211ENST00000558561 TNNI2P48788 182 aa5.54□□□□□ -1.52
SPG11-211ENST00000558561 APOBRQ0VD83 1088 aa5.54□□□□□ -1.52
SPG11-211ENST00000558561 PAK2Q13177 524 aa5.54□□□□□ -1.52
SPG11-211ENST00000558561 MPP2Q14168 576 aa5.54□□□□□ -1.52
SPG11-211ENST00000558561 MAP7Q14244 749 aa5.54□□□□□ -1.52
SPG11-211ENST00000558561 DIEXFQ68CQ4 756 aaKnown RBP5.54□□□□□ -1.52
SPG11-211ENST00000558561 SEZ6L2Q6UXD5 910 aa5.54□□□□□ -1.52
SPG11-211ENST00000558561 CDC37L1Q7L3B6 337 aa5.54□□□□□ -1.52
SPG11-211ENST00000558561 REC114Q7Z4M0 266 aa5.54□□□□□ -1.52
SPG11-211ENST00000558561 TTC5Q8N0Z6 440 aa5.54□□□□□ -1.52
SPG11-211ENST00000558561 SYNE4Q8N205 404 aa5.54□□□□□ -1.52
SPG11-211ENST00000558561 TSPYL6Q8N831 410 aa5.54□□□□□ -1.52
SPG11-211ENST00000558561 C8orf58Q8NAV2 365 aa5.54□□□□□ -1.52
SPG11-211ENST00000558561 FLAD1Q8NFF5 587 aa5.54□□□□□ -1.52
SPG11-211ENST00000558561 ZNF507Q8TCN5 953 aa5.54□□□□□ -1.52
SPG11-211ENST00000558561 FMNL2Q96PY5 1086 aa5.54□□□□□ -1.52
SPG11-211ENST00000558561 TGIF2Q9GZN2 237 aa5.54□□□□□ -1.52
SPG11-211ENST00000558561 FBRSQ9HAH7 460 aa5.54□□□□□ -1.52
SPG11-211ENST00000558561 BRMS1Q9HCU9 246 aa5.54□□□□□ -1.52
SPG11-211ENST00000558561 C1GALT1Q9NS00 363 aa5.54□□□□□ -1.52
SPG11-211ENST00000558561 PCOLCE2Q9UKZ9 415 aa5.54□□□□□ -1.52
SPG11-211ENST00000558561 C4AP0C0L4 1744 aa5.54□□□□□ -1.52
SPG11-211ENST00000558561 USP42Q9H9J4 1324 aaKnown RBP5.53□□□□□ -1.52
SPG11-211ENST00000558561 CAMTA2O94983 1202 aa5.53□□□□□ -1.52
SPG11-211ENST00000558561 SERPINB2P05120 415 aa5.53□□□□□ -1.52
SPG11-211ENST00000558561 SNRPA1P09661 255 aaKnown RBP5.53□□□□□ -1.52
SPG11-211ENST00000558561 ZNF853P0CG23 659 aa5.53□□□□□ -1.52
SPG11-211ENST00000558561 FSTP19883 344 aa5.53□□□□□ -1.52
SPG11-211ENST00000558561 ADMP35318 185 aa5.53□□□□□ -1.52
SPG11-211ENST00000558561 CDK5R2Q13319 367 aa5.53□□□□□ -1.52
SPG11-211ENST00000558561 WDR43Q15061 677 aaKnown RBP eCLIP5.53□□□□□ -1.52
SPG11-211ENST00000558561 GPR162Q16538 588 aa5.53□□□□□ -1.52
SPG11-211ENST00000558561 NKG7Q16617 165 aa5.53□□□□□ -1.52
SPG11-211ENST00000558561 CWF19L2Q2TBE0 894 aaKnown RBP5.53□□□□□ -1.52
SPG11-211ENST00000558561 RNF43Q68DV7 783 aa5.53□□□□□ -1.52
SPG11-211ENST00000558561 LRP10Q7Z4F1 713 aa5.53□□□□□ -1.52
SPG11-211ENST00000558561 NLGN1Q8N2Q7 840 aa5.53□□□□□ -1.52
SPG11-211ENST00000558561 FBXL6Q8N531 539 aa5.53□□□□□ -1.52
SPG11-211ENST00000558561 NKD1Q969G9 470 aa5.53□□□□□ -1.52
SPG11-211ENST00000558561 MFSD14AQ96MC6 490 aa5.53□□□□□ -1.52
SPG11-211ENST00000558561 LRRC3Q9BY71 257 aa5.53□□□□□ -1.52
SPG11-211ENST00000558561 CCSER2Q9H7U1 834 aa5.53□□□□□ -1.52
SPG11-211ENST00000558561 PRKAG2Q9UGJ0 569 aa5.53□□□□□ -1.52
SPG11-211ENST00000558561 TSPYL4Q9UJ04 414 aa5.53□□□□□ -1.52
SPG11-211ENST00000558561 TACC3Q9Y6A5 838 aa5.53□□□□□ -1.52
SPG11-211ENST00000558561 ZNF831Q5JPB2 1677 aa5.53□□□□□ -1.52
SPG11-211ENST00000558561 UTRNP46939 3433 aa5.52□□□□□ -1.53
SPG11-211ENST00000558561 MAPK8IP3Q9UPT6 1336 aa5.52□□□□□ -1.53
SPG11-211ENST00000558561 ANP32CO43423 234 aa5.52□□□□□ -1.53
SPG11-211ENST00000558561 STARD3NLO95772 234 aa5.52□□□□□ -1.53
SPG11-211ENST00000558561 PGRP06401 933 aa5.52□□□□□ -1.53
SPG11-211ENST00000558561 ITGB7P26010 798 aa5.52□□□□□ -1.53
SPG11-211ENST00000558561 MCM4P33991 863 aa5.52□□□□□ -1.53
SPG11-211ENST00000558561 IL6STP40189 918 aaPredicted RBP5.52□□□□□ -1.53
SPG11-211ENST00000558561 PRELPP51888 382 aa5.52□□□□□ -1.53
SPG11-211ENST00000558561 CLCQ05315 142 aa5.52□□□□□ -1.53
SPG11-211ENST00000558561 NFIAQ12857 509 aa5.52□□□□□ -1.53
SPG11-211ENST00000558561 SLBPQ14493 270 aaKnown RBP eCLIP5.52□□□□□ -1.53
SPG11-211ENST00000558561 PRSS36Q5K4E3 855 aa5.52□□□□□ -1.53
SPG11-211ENST00000558561 OLFM4Q6UX06 510 aa5.52□□□□□ -1.53
SPG11-211ENST00000558561 HID1Q8IV36 788 aa5.52□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms