RNA–Protein interactions for RNA: ENST00000557658.5

VIPAS39-211, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VIPAS39, Length 2,562 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-211ENST00000557658 SHTN1A0MZ66 631 aa13.15□□□□□ -0.3
VIPAS39-211ENST00000557658 GNAQP50148 359 aa13.15□□□□□ -0.3
VIPAS39-211ENST00000557658 GTF2A1P52655 376 aaPredicted RBP13.15□□□□□ -0.3
VIPAS39-211ENST00000557658 STK4Q13043 487 aa13.15□□□□□ -0.3
VIPAS39-211ENST00000557658 EZH2Q15910 746 aaKnown RBP13.15□□□□□ -0.3
VIPAS39-211ENST00000557658 CCDC181Q5TID7 509 aa13.15□□□□□ -0.3
VIPAS39-211ENST00000557658 ALS2CLQ60I27 953 aa13.15□□□□□ -0.3
VIPAS39-211ENST00000557658 TYW1BQ6NUM6 668 aa13.15□□□□□ -0.3
VIPAS39-211ENST00000557658 SMCR8Q8TEV9 937 aaPredicted RBP13.15□□□□□ -0.3
VIPAS39-211ENST00000557658 OSBPL9Q96SU4 736 aa13.15□□□□□ -0.3
VIPAS39-211ENST00000557658 C7orf25Q9BPX7 421 aa13.15□□□□□ -0.3
VIPAS39-211ENST00000557658 DEF6Q9H4E7 631 aa13.15□□□□□ -0.3
VIPAS39-211ENST00000557658 DMGDHQ9UI17 866 aaKnown RBP13.15□□□□□ -0.3
VIPAS39-211ENST00000557658 NIP7Q9Y221 180 aaKnown RBP eCLIP13.15□□□□□ -0.3
VIPAS39-211ENST00000557658 CASZ1Q86V15 1759 aa13.14□□□□□ -0.31
VIPAS39-211ENST00000557658 EIF3HO15372 352 aaKnown RBP eCLIP13.14□□□□□ -0.31
VIPAS39-211ENST00000557658 MOCS3O95396 460 aa13.14□□□□□ -0.31
VIPAS39-211ENST00000557658 PAFAH1B1P43034 410 aa13.14□□□□□ -0.31
VIPAS39-211ENST00000557658 KIF11P52732 1056 aa13.14□□□□□ -0.31
VIPAS39-211ENST00000557658 AMPD3Q01432 767 aa13.14□□□□□ -0.31
VIPAS39-211ENST00000557658 SBK1Q52WX2 424 aa13.14□□□□□ -0.31
VIPAS39-211ENST00000557658 C2CD5Q86YS7 1000 aa13.14□□□□□ -0.31
VIPAS39-211ENST00000557658 ANKRD18AQ8IVF6 992 aa13.14□□□□□ -0.31
VIPAS39-211ENST00000557658 MICALL1Q8N3F8 863 aa13.14□□□□□ -0.31
VIPAS39-211ENST00000557658 HDAC7Q8WUI4 952 aa13.14□□□□□ -0.31
VIPAS39-211ENST00000557658 NSUN4Q96CB9 384 aaKnown RBP13.14□□□□□ -0.31
VIPAS39-211ENST00000557658 DRC1Q96MC2 740 aa13.14□□□□□ -0.31
VIPAS39-211ENST00000557658 MLXIPQ9HAP2 919 aa13.14□□□□□ -0.31
VIPAS39-211ENST00000557658 CCDC87Q9NVE4 849 aa13.14□□□□□ -0.31
VIPAS39-211ENST00000557658 A6NNZ2 444 aa13.14□□□□□ -0.31
VIPAS39-211ENST00000557658 EXOC5O00471 708 aa13.14□□□□□ -0.31
VIPAS39-211ENST00000557658 HSF2BPO75031 334 aa13.14□□□□□ -0.31
VIPAS39-211ENST00000557658 CAMTA2O94983 1202 aa13.14□□□□□ -0.31
VIPAS39-211ENST00000557658 PLEKP08567 350 aaPredicted RBP13.14□□□□□ -0.31
VIPAS39-211ENST00000557658 CYP2D6P10635 497 aa13.14□□□□□ -0.31
VIPAS39-211ENST00000557658 EPB41P11171 864 aaKnown RBP13.14□□□□□ -0.31
VIPAS39-211ENST00000557658 GNGT1P63211 74 aa13.14□□□□□ -0.31
VIPAS39-211ENST00000557658 TUBB8Q3ZCM7 444 aa13.14□□□□□ -0.31
VIPAS39-211ENST00000557658 CNNM4Q6P4Q7 775 aa13.14□□□□□ -0.31
VIPAS39-211ENST00000557658 PPP1R3FQ6ZSY5 799 aaPredicted RBP13.14□□□□□ -0.31
VIPAS39-211ENST00000557658 DGKHQ86XP1 1220 aa13.14□□□□□ -0.31
VIPAS39-211ENST00000557658 PLCD3Q8N3E9 789 aa13.14□□□□□ -0.31
VIPAS39-211ENST00000557658 PNMA1Q8ND90 353 aa13.14□□□□□ -0.31
VIPAS39-211ENST00000557658 BCAS4Q8TDM0 211 aa13.14□□□□□ -0.31
VIPAS39-211ENST00000557658 LRRC15Q8TF66 581 aa13.14□□□□□ -0.31
VIPAS39-211ENST00000557658 RRP36Q96EU6 259 aaKnown RBP13.14□□□□□ -0.31
VIPAS39-211ENST00000557658 HINFPQ9BQA5 517 aa13.14□□□□□ -0.31
VIPAS39-211ENST00000557658 STIM2Q9P246 746 aa13.14□□□□□ -0.31
VIPAS39-211ENST00000557658 ARHGAP20Q9P2F6 1191 aa13.14□□□□□ -0.31
VIPAS39-211ENST00000557658 FLT1P17948 1338 aa13.14□□□□□ -0.31
VIPAS39-211ENST00000557658 SCN7AQ01118 1682 aa13.14□□□□□ -0.31
VIPAS39-211ENST00000557658 AKR1B10O60218 316 aa13.13□□□□□ -0.31
VIPAS39-211ENST00000557658 LCA5LO95447 670 aa13.13□□□□□ -0.31
VIPAS39-211ENST00000557658 MATR3P43243 847 aaKnown RBP eCLIP13.13□□□□□ -0.31
VIPAS39-211ENST00000557658 MECOMQ03112 1051 aa13.13□□□□□ -0.31
VIPAS39-211ENST00000557658 GRM4Q14833 912 aa13.13□□□□□ -0.31
VIPAS39-211ENST00000557658 COBLL1Q53SF7 1204 aa13.13□□□□□ -0.31
VIPAS39-211ENST00000557658 ADAMTS2O95450 1211 aa13.13□□□□□ -0.31
VIPAS39-211ENST00000557658 OR52Z1P0C646 297 aa13.13□□□□□ -0.31
VIPAS39-211ENST00000557658 FCER1AP12319 257 aa13.13□□□□□ -0.31
VIPAS39-211ENST00000557658 TNFRSF8P28908 595 aa13.13□□□□□ -0.31
VIPAS39-211ENST00000557658 EIF4A3P38919 411 aaKnown RBP13.13□□□□□ -0.31
VIPAS39-211ENST00000557658 VWA3BQ502W6 1294 aa13.13□□□□□ -0.31
VIPAS39-211ENST00000557658 NFRKBQ6P4R8 1299 aa13.13□□□□□ -0.31
VIPAS39-211ENST00000557658 INTS5Q6P9B9 1019 aaKnown RBP13.13□□□□□ -0.31
VIPAS39-211ENST00000557658 HEATR3Q7Z4Q2 680 aa13.13□□□□□ -0.31
VIPAS39-211ENST00000557658 STAG2Q8N3U4 1231 aa13.13□□□□□ -0.31
VIPAS39-211ENST00000557658 CCDC155Q8N6L0 562 aa13.13□□□□□ -0.31
VIPAS39-211ENST00000557658 CAVIN3Q969G5 261 aa13.13□□□□□ -0.31
VIPAS39-211ENST00000557658 FAM84BQ96KN1 310 aaPredicted RBP13.13□□□□□ -0.31
VIPAS39-211ENST00000557658 FAM169AQ9Y6X4 670 aa13.13□□□□□ -0.31
VIPAS39-211ENST00000557658 KIAA1551Q9HCM1 1747 aa13.12□□□□□ -0.31
VIPAS39-211ENST00000557658 ERLIN2O94905 339 aa13.12□□□□□ -0.31
VIPAS39-211ENST00000557658 MAGEA1P43355 309 aa13.12□□□□□ -0.31
VIPAS39-211ENST00000557658 NT5C2P49902 561 aa13.12□□□□□ -0.31
VIPAS39-211ENST00000557658 SLC7A5Q01650 507 aa13.12□□□□□ -0.31
VIPAS39-211ENST00000557658 HAUS3Q68CZ6 603 aa13.12□□□□□ -0.31
VIPAS39-211ENST00000557658 CCDC84Q86UT8 332 aaPredicted RBP13.12□□□□□ -0.31
VIPAS39-211ENST00000557658 BARHL2Q9NY43 387 aa13.12□□□□□ -0.31
VIPAS39-211ENST00000557658 SIK3Q9Y2K2 1263 aa13.12□□□□□ -0.31
VIPAS39-211ENST00000557658 GRIN2DO15399 1336 aa13.12□□□□□ -0.31
VIPAS39-211ENST00000557658 WTIPA6NIX2 430 aaPredicted RBP13.12□□□□□ -0.31
VIPAS39-211ENST00000557658 SKOR1P84550 965 aa13.12□□□□□ -0.31
VIPAS39-211ENST00000557658 TFAP4Q01664 338 aa13.12□□□□□ -0.31
VIPAS39-211ENST00000557658 NNTQ13423 1086 aa13.12□□□□□ -0.31
VIPAS39-211ENST00000557658 TXNRD1Q16881 649 aa13.12□□□□□ -0.31
VIPAS39-211ENST00000557658 GLE1Q53GS7 698 aaKnown RBP13.12□□□□□ -0.31
VIPAS39-211ENST00000557658 C8orf74Q6P047 294 aa13.12□□□□□ -0.31
VIPAS39-211ENST00000557658 NDST4Q9H3R1 872 aa13.12□□□□□ -0.31
VIPAS39-211ENST00000557658 FAM207AQ9NSI2 230 aaPredicted RBP13.12□□□□□ -0.31
VIPAS39-211ENST00000557658 BSDC1Q9NW68 430 aaPredicted RBP13.12□□□□□ -0.31
VIPAS39-211ENST00000557658 COL4A1P02462 1669 aa13.12□□□□□ -0.31
VIPAS39-211ENST00000557658 STXBP3O00186 592 aa13.11□□□□□ -0.31
VIPAS39-211ENST00000557658 PJA2O43164 708 aa13.11□□□□□ -0.31
VIPAS39-211ENST00000557658 FGFR1OPO95684 399 aaKnown RBP13.11□□□□□ -0.31
VIPAS39-211ENST00000557658 CENPPQ6IPU0 288 aa13.11□□□□□ -0.31
VIPAS39-211ENST00000557658 MMS22LQ6ZRQ5 1243 aa13.11□□□□□ -0.31
VIPAS39-211ENST00000557658 ANKS1AQ92625 1134 aa13.11□□□□□ -0.31
VIPAS39-211ENST00000557658 SEMA6BQ9H3T3 888 aa13.11□□□□□ -0.31
VIPAS39-211ENST00000557658 MMRN2Q9H8L6 949 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 66.7 ms