RNA–Protein interactions for RNA: ENST00000557585.5

PRKCH-226, Transcript of protein kinase C eta, humanhuman

TSL 5

Gene PRKCH, Length 938 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-226ENST00000557585 MTA3Q9BTC8 594 aa12.16□□□□□ -0.46
PRKCH-226ENST00000557585 NCOA5Q9HCD5 579 aaKnown RBP12.16□□□□□ -0.46
PRKCH-226ENST00000557585 CYP39A1Q9NYL5 469 aa12.16□□□□□ -0.46
PRKCH-226ENST00000557585 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.16□□□□□ -0.46
PRKCH-226ENST00000557585 COL20A1Q9P218 1284 aa12.16□□□□□ -0.46
PRKCH-226ENST00000557585 PCDH10Q9P2E7 1040 aa12.16□□□□□ -0.46
PRKCH-226ENST00000557585 WDR19Q8NEZ3 1342 aa12.15□□□□□ -0.46
PRKCH-226ENST00000557585 ADAMTS3O15072 1205 aa12.15□□□□□ -0.46
PRKCH-226ENST00000557585 SNAI1O95863 264 aaPredicted RBP12.15□□□□□ -0.46
PRKCH-226ENST00000557585 FDX1P10109 184 aa12.15□□□□□ -0.46
PRKCH-226ENST00000557585 CYBAP13498 195 aa12.15□□□□□ -0.46
PRKCH-226ENST00000557585 CCT2P78371 535 aaKnown RBP12.15□□□□□ -0.46
PRKCH-226ENST00000557585 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.15□□□□□ -0.46
PRKCH-226ENST00000557585 FBXO11Q86XK2 927 aa12.15□□□□□ -0.46
PRKCH-226ENST00000557585 FAM133AQ8N9E0 248 aa12.15□□□□□ -0.46
PRKCH-226ENST00000557585 DDX11Q96FC9 970 aa12.15□□□□□ -0.46
PRKCH-226ENST00000557585 DEFB118Q96PH6 123 aa12.15□□□□□ -0.46
PRKCH-226ENST00000557585 AGXT2Q9BYV1 514 aa12.15□□□□□ -0.46
PRKCH-226ENST00000557585 XRN2Q9H0D6 950 aaKnown RBP eCLIP12.15□□□□□ -0.46
PRKCH-226ENST00000557585 BAZ2BQ9UIF8 2168 aaKnown RBP12.15□□□□□ -0.47
PRKCH-226ENST00000557585 CNTNAP5Q8WYK1 1306 aa12.14□□□□□ -0.47
PRKCH-226ENST00000557585 PTPDC1A2A3K4 754 aa12.14□□□□□ -0.47
PRKCH-226ENST00000557585 GOLGA8AA7E2F4 631 aa12.14□□□□□ -0.47
PRKCH-226ENST00000557585 GOLGA8BA8MQT2 603 aa12.14□□□□□ -0.47
PRKCH-226ENST00000557585 ZBTB5O15062 677 aa12.14□□□□□ -0.47
PRKCH-226ENST00000557585 ZBTB43O43298 467 aa12.14□□□□□ -0.47
PRKCH-226ENST00000557585 ADCY6O43306 1168 aa12.14□□□□□ -0.47
PRKCH-226ENST00000557585 EPB41L2O43491 1005 aaKnown RBP12.14□□□□□ -0.47
PRKCH-226ENST00000557585 LARGE1O95461 756 aa12.14□□□□□ -0.47
PRKCH-226ENST00000557585 CALML3P27482 149 aa12.14□□□□□ -0.47
PRKCH-226ENST00000557585 FGD1P98174 961 aa12.14□□□□□ -0.47
PRKCH-226ENST00000557585 STK3Q13188 491 aa12.14□□□□□ -0.47
PRKCH-226ENST00000557585 CTCFLQ8NI51 663 aaPredicted RBP12.14□□□□□ -0.47
PRKCH-226ENST00000557585 DIS3LQ8TF46 1054 aaKnown RBP12.14□□□□□ -0.47
PRKCH-226ENST00000557585 GPKOWQ92917 476 aaPredicted RBP eCLIP12.14□□□□□ -0.47
PRKCH-226ENST00000557585 PAK6Q9NQU5 681 aaPredicted RBP12.14□□□□□ -0.47
PRKCH-226ENST00000557585 PDRG1Q9NUG6 133 aa12.14□□□□□ -0.47
PRKCH-226ENST00000557585 CYP46A1Q9Y6A2 500 aa12.14□□□□□ -0.47
PRKCH-226ENST00000557585 ZNF236Q9UL36 1845 aa12.14□□□□□ -0.47
PRKCH-226ENST00000557585 HMGB1P09429 215 aaKnown RBP12.13□□□□□ -0.47
PRKCH-226ENST00000557585 PSMA5P28066 241 aa12.13□□□□□ -0.47
PRKCH-226ENST00000557585 PDIA3P30101 505 aaKnown RBP12.13□□□□□ -0.47
PRKCH-226ENST00000557585 HOXA13P31271 388 aaPredicted RBP12.13□□□□□ -0.47
PRKCH-226ENST00000557585 COPB2P35606 906 aa12.13□□□□□ -0.47
PRKCH-226ENST00000557585 RPS6P62753 249 aaKnown RBP12.13□□□□□ -0.47
PRKCH-226ENST00000557585 UBXN2AP68543 259 aa12.13□□□□□ -0.47
PRKCH-226ENST00000557585 RTN1Q16799 776 aa12.13□□□□□ -0.47
PRKCH-226ENST00000557585 TKFCQ3LXA3 575 aa12.13□□□□□ -0.47
PRKCH-226ENST00000557585 OLFML2BQ68BL8 750 aa12.13□□□□□ -0.47
PRKCH-226ENST00000557585 TYW1BQ6NUM6 668 aa12.13□□□□□ -0.47
PRKCH-226ENST00000557585 EEPD1Q7L9B9 569 aa12.13□□□□□ -0.47
PRKCH-226ENST00000557585 TMTC2Q8N394 836 aa12.13□□□□□ -0.47
PRKCH-226ENST00000557585 U2AF1L4Q8WU68 220 aaKnown RBP12.13□□□□□ -0.47
PRKCH-226ENST00000557585 TAAR1Q96RJ0 339 aa12.13□□□□□ -0.47
PRKCH-226ENST00000557585 MAP3K14Q99558 947 aa12.13□□□□□ -0.47
PRKCH-226ENST00000557585 TINF2Q9BSI4 451 aa12.13□□□□□ -0.47
PRKCH-226ENST00000557585 SPZ1Q9BXG8 430 aa12.13□□□□□ -0.47
PRKCH-226ENST00000557585 TM6SF1Q9BZW5 370 aa12.13□□□□□ -0.47
PRKCH-226ENST00000557585 FBXO40Q9UH90 709 aa12.13□□□□□ -0.47
PRKCH-226ENST00000557585 PCDHA1Q9Y5I3 950 aa12.13□□□□□ -0.47
PRKCH-226ENST00000557585 RPTORQ8N122 1335 aa12.12□□□□□ -0.47
PRKCH-226ENST00000557585 LCTP09848 1927 aa12.12□□□□□ -0.47
PRKCH-226ENST00000557585 PNMA6FA0A0J9YX94 578 aa12.12□□□□□ -0.47
PRKCH-226ENST00000557585 C11orf97A0A1B0GVM6 126 aaPredicted RBP12.12□□□□□ -0.47
PRKCH-226ENST00000557585 ZNF865P0CJ78 1059 aaPredicted RBP12.12□□□□□ -0.47
PRKCH-226ENST00000557585 CNGA1P29973 690 aa12.12□□□□□ -0.47
PRKCH-226ENST00000557585 MFSD14CQ5VZR4 134 aa12.12□□□□□ -0.47
PRKCH-226ENST00000557585 RNF207Q6ZRF8 634 aa12.12□□□□□ -0.47
PRKCH-226ENST00000557585 ARMCX2Q7L311 632 aa12.12□□□□□ -0.47
PRKCH-226ENST00000557585 SYTL5Q8TDW5 730 aaPredicted RBP12.12□□□□□ -0.47
PRKCH-226ENST00000557585 PHKBQ93100 1093 aa12.12□□□□□ -0.47
PRKCH-226ENST00000557585 IL17RAQ96F46 866 aa12.12□□□□□ -0.47
PRKCH-226ENST00000557585 AMNQ9BXJ7 453 aa12.12□□□□□ -0.47
PRKCH-226ENST00000557585 KATNBL1Q9H079 304 aa12.12□□□□□ -0.47
PRKCH-226ENST00000557585 HMX1Q9NP08 348 aaPredicted RBP12.12□□□□□ -0.47
PRKCH-226ENST00000557585 PDGFCQ9NRA1 345 aa12.12□□□□□ -0.47
PRKCH-226ENST00000557585 TPCN1Q9ULQ1 816 aa12.12□□□□□ -0.47
PRKCH-226ENST00000557585 V9GY48 417 aaPredicted RBP12.12□□□□□ -0.47
PRKCH-226ENST00000557585 KIAA0100Q14667 2235 aaKnown RBP12.12□□□□□ -0.47
PRKCH-226ENST00000557585 ABCB11O95342 1321 aa12.11□□□□□ -0.47
PRKCH-226ENST00000557585 SGPL1O95470 568 aa12.11□□□□□ -0.47
PRKCH-226ENST00000557585 CFBP00751 764 aa12.11□□□□□ -0.47
PRKCH-226ENST00000557585 GJB1P08034 283 aa12.11□□□□□ -0.47
PRKCH-226ENST00000557585 CALM1P0DP23 149 aa12.11□□□□□ -0.47
PRKCH-226ENST00000557585 CALM2P0DP24 149 aa12.11□□□□□ -0.47
PRKCH-226ENST00000557585 CALM3P0DP25 149 aa12.11□□□□□ -0.47
PRKCH-226ENST00000557585 KIF5BP33176 963 aa12.11□□□□□ -0.47
PRKCH-226ENST00000557585 METAP2P50579 478 aaKnown RBP eCLIP12.11□□□□□ -0.47
PRKCH-226ENST00000557585 AK2P54819 239 aa12.11□□□□□ -0.47
PRKCH-226ENST00000557585 NTRK3Q16288 839 aa12.11□□□□□ -0.47
PRKCH-226ENST00000557585 GJC2Q5T442 439 aaPredicted RBP12.11□□□□□ -0.47
PRKCH-226ENST00000557585 WWC2Q6AWC2 1192 aa12.11□□□□□ -0.47
PRKCH-226ENST00000557585 FBXO16Q8IX29 292 aaPredicted RBP12.11□□□□□ -0.47
PRKCH-226ENST00000557585 FBXL16Q8N461 479 aa12.11□□□□□ -0.47
PRKCH-226ENST00000557585 IL31RAQ8NI17 732 aa12.11□□□□□ -0.47
PRKCH-226ENST00000557585 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.11□□□□□ -0.47
PRKCH-226ENST00000557585 DIS3Q9Y2L1 958 aaKnown RBP12.11□□□□□ -0.47
PRKCH-226ENST00000557585 CENPFP49454 3210 aa12.11□□□□□ -0.47
PRKCH-226ENST00000557585 ZNFX1Q9P2E3 1918 aaKnown RBP12.1□□□□□ -0.47
PRKCH-226ENST00000557585 RBAK-RBAKDNI3L0D1 243 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms