RNA–Protein interactions for RNA: ENST00000557394.5

SUPT16H-207, Transcript of SPT16 homolog, facilitates chromatin remodeling subunit, humanhuman

TSL 2

Gene SUPT16H, Length 2,324 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT16H-207ENST00000557394 CFAP58Q5T655 872 aa11.59□□□□□ -0.55
SUPT16H-207ENST00000557394 CRELD2Q6UXH1 353 aaPredicted RBP11.59□□□□□ -0.55
SUPT16H-207ENST00000557394 KIAA1328Q86T90 577 aa11.59□□□□□ -0.55
SUPT16H-207ENST00000557394 PAGE5Q96GU1 130 aa11.59□□□□□ -0.55
SUPT16H-207ENST00000557394 VPS16Q9H269 839 aa11.59□□□□□ -0.55
SUPT16H-207ENST00000557394 CAPN11Q9UMQ6 739 aa11.59□□□□□ -0.55
SUPT16H-207ENST00000557394 UBN2Q6ZU65 1347 aa11.59□□□□□ -0.55
SUPT16H-207ENST00000557394 A0A1W2PQC6 194 aa11.59□□□□□ -0.55
SUPT16H-207ENST00000557394 ATP6V1G2O95670 118 aa11.59□□□□□ -0.55
SUPT16H-207ENST00000557394 IBSPP21815 317 aaPredicted RBP11.59□□□□□ -0.55
SUPT16H-207ENST00000557394 SLC7A5Q01650 507 aa11.59□□□□□ -0.55
SUPT16H-207ENST00000557394 BYSLQ13895 437 aaKnown RBP11.59□□□□□ -0.55
SUPT16H-207ENST00000557394 RILPL1Q5EBL4 403 aa11.59□□□□□ -0.55
SUPT16H-207ENST00000557394 USP49Q70CQ1 688 aa11.59□□□□□ -0.55
SUPT16H-207ENST00000557394 CCDC170Q8IYT3 715 aa11.59□□□□□ -0.55
SUPT16H-207ENST00000557394 LMBR1Q8WVP7 490 aa11.59□□□□□ -0.55
SUPT16H-207ENST00000557394 CCDC43Q96MW1 224 aaKnown RBP11.59□□□□□ -0.55
SUPT16H-207ENST00000557394 FAM117AQ9C073 453 aa11.59□□□□□ -0.55
SUPT16H-207ENST00000557394 KIF9Q9HAQ2 790 aa11.59□□□□□ -0.55
SUPT16H-207ENST00000557394 GPR108Q9NPR9 543 aa11.59□□□□□ -0.55
SUPT16H-207ENST00000557394 GDF3Q9NR23 364 aa11.59□□□□□ -0.55
SUPT16H-207ENST00000557394 DDX21Q9NR30 783 aaKnown RBP eCLIP11.59□□□□□ -0.55
SUPT16H-207ENST00000557394 STRN4Q9NRL3 753 aa11.59□□□□□ -0.55
SUPT16H-207ENST00000557394 TAB2Q9NYJ8 693 aa11.59□□□□□ -0.55
SUPT16H-207ENST00000557394 RWDD2AQ9UIY3 292 aa11.59□□□□□ -0.55
SUPT16H-207ENST00000557394 ANGEL1Q9UNK9 670 aaKnown RBP11.59□□□□□ -0.55
SUPT16H-207ENST00000557394 CTNND2Q9UQB3 1225 aa11.59□□□□□ -0.55
SUPT16H-207ENST00000557394 A0A087X0B3 334 aa11.58□□□□□ -0.56
SUPT16H-207ENST00000557394 GMNCA6NCL1 334 aa11.58□□□□□ -0.56
SUPT16H-207ENST00000557394 PPP1R12BO60237 982 aaPredicted RBP11.58□□□□□ -0.56
SUPT16H-207ENST00000557394 RANBP6O60518 1105 aaKnown RBP11.58□□□□□ -0.56
SUPT16H-207ENST00000557394 PPFIA2O75334 1257 aa11.58□□□□□ -0.56
SUPT16H-207ENST00000557394 SKAP2O75563 359 aaPredicted RBP11.58□□□□□ -0.56
SUPT16H-207ENST00000557394 FGAP02671 866 aa11.58□□□□□ -0.56
SUPT16H-207ENST00000557394 CYLC1P35663 651 aaPredicted RBP11.58□□□□□ -0.56
SUPT16H-207ENST00000557394 MAGEA8P43361 318 aa11.58□□□□□ -0.56
SUPT16H-207ENST00000557394 PIP4K2AP48426 406 aaPredicted RBP11.58□□□□□ -0.56
SUPT16H-207ENST00000557394 TRPC1P48995 793 aa11.58□□□□□ -0.56
SUPT16H-207ENST00000557394 VAV2P52735 878 aa11.58□□□□□ -0.56
SUPT16H-207ENST00000557394 HAND2P61296 217 aa11.58□□□□□ -0.56
SUPT16H-207ENST00000557394 ELF3P78545 371 aaPredicted RBP11.58□□□□□ -0.56
SUPT16H-207ENST00000557394 SLMAPQ14BN4 828 aa11.58□□□□□ -0.56
SUPT16H-207ENST00000557394 ACCSLQ4AC99 568 aa11.58□□□□□ -0.56
SUPT16H-207ENST00000557394 RALYLQ86SE5 291 aaKnown RBP11.58□□□□□ -0.56
SUPT16H-207ENST00000557394 KIRREL3Q8IZU9 778 aa11.58□□□□□ -0.56
SUPT16H-207ENST00000557394 ARFGAP2Q8N6H7 521 aa11.58□□□□□ -0.56
SUPT16H-207ENST00000557394 UHMK1Q8TAS1 419 aaKnown RBP11.58□□□□□ -0.56
SUPT16H-207ENST00000557394 PHKBQ93100 1093 aa11.58□□□□□ -0.56
SUPT16H-207ENST00000557394 HINFPQ9BQA5 517 aa11.58□□□□□ -0.56
SUPT16H-207ENST00000557394 SENP7Q9BQF6 1050 aa11.58□□□□□ -0.56
SUPT16H-207ENST00000557394 CSRNP2Q9H175 543 aa11.58□□□□□ -0.56
SUPT16H-207ENST00000557394 AATFQ9NY61 560 aaKnown RBP eCLIP11.58□□□□□ -0.56
SUPT16H-207ENST00000557394 UTP6Q9NYH9 597 aaKnown RBP11.58□□□□□ -0.56
SUPT16H-207ENST00000557394 LUC7L2Q9Y383 392 aaKnown RBP11.58□□□□□ -0.56
SUPT16H-207ENST00000557394 KCNJ18B7U540 433 aa11.58□□□□□ -0.56
SUPT16H-207ENST00000557394 OPLAHO14841 1288 aa11.58□□□□□ -0.56
SUPT16H-207ENST00000557394 TRAPPC3O43617 180 aa11.58□□□□□ -0.56
SUPT16H-207ENST00000557394 SSBP05455 408 aaKnown RBP eCLIP11.58□□□□□ -0.56
SUPT16H-207ENST00000557394 RPSAP08865 295 aaKnown RBP11.58□□□□□ -0.56
SUPT16H-207ENST00000557394 VDRP11473 427 aa11.58□□□□□ -0.56
SUPT16H-207ENST00000557394 IARSP41252 1262 aaKnown RBP11.58□□□□□ -0.56
SUPT16H-207ENST00000557394 PPARAQ07869 468 aa11.58□□□□□ -0.56
SUPT16H-207ENST00000557394 RIPK1Q13546 671 aa11.58□□□□□ -0.56
SUPT16H-207ENST00000557394 KCNJ12Q14500 433 aa11.58□□□□□ -0.56
SUPT16H-207ENST00000557394 PDIA6Q15084 440 aa11.58□□□□□ -0.56
SUPT16H-207ENST00000557394 APOA5Q6Q788 366 aa11.58□□□□□ -0.56
SUPT16H-207ENST00000557394 SMYD4Q8IYR2 804 aaPredicted RBP11.58□□□□□ -0.56
SUPT16H-207ENST00000557394 TRIM58Q8NG06 486 aa11.58□□□□□ -0.56
SUPT16H-207ENST00000557394 CUL5Q93034 780 aa11.58□□□□□ -0.56
SUPT16H-207ENST00000557394 SPDL1Q96EA4 605 aa11.58□□□□□ -0.56
SUPT16H-207ENST00000557394 SAAL1Q96ER3 474 aa11.58□□□□□ -0.56
SUPT16H-207ENST00000557394 TSGA10Q9BZW7 698 aa11.58□□□□□ -0.56
SUPT16H-207ENST00000557394 NOD2Q9HC29 1040 aa11.58□□□□□ -0.56
SUPT16H-207ENST00000557394 FAM217BQ9NTX9 383 aaPredicted RBP11.58□□□□□ -0.56
SUPT16H-207ENST00000557394 SLC12A6Q9UHW9 1150 aa11.58□□□□□ -0.56
SUPT16H-207ENST00000557394 LEMD3Q9Y2U8 911 aa11.58□□□□□ -0.56
SUPT16H-207ENST00000557394 SNUPNO95149 360 aaKnown RBP11.57□□□□□ -0.56
SUPT16H-207ENST00000557394 MMP1P03956 469 aa11.57□□□□□ -0.56
SUPT16H-207ENST00000557394 TCP1P17987 556 aaKnown RBP11.57□□□□□ -0.56
SUPT16H-207ENST00000557394 TSR1Q2NL82 804 aaKnown RBP11.57□□□□□ -0.56
SUPT16H-207ENST00000557394 ARMC9Q7Z3E5 817 aa11.57□□□□□ -0.56
SUPT16H-207ENST00000557394 USHBP1Q8N6Y0 703 aa11.57□□□□□ -0.56
SUPT16H-207ENST00000557394 MB21D1Q8N884 522 aa11.57□□□□□ -0.56
SUPT16H-207ENST00000557394 LSM14AQ8ND56 463 aaKnown RBP11.57□□□□□ -0.56
SUPT16H-207ENST00000557394 ZNF507Q8TCN5 953 aa11.57□□□□□ -0.56
SUPT16H-207ENST00000557394 CCT6BQ92526 530 aa11.57□□□□□ -0.56
SUPT16H-207ENST00000557394 SEC16BQ96JE7 1060 aa11.57□□□□□ -0.56
SUPT16H-207ENST00000557394 FOXP1Q9H334 677 aaPredicted RBP11.57□□□□□ -0.56
SUPT16H-207ENST00000557394 TMBIM4Q9HC24 238 aa11.57□□□□□ -0.56
SUPT16H-207ENST00000557394 POLD4Q9HCU8 107 aa11.57□□□□□ -0.56
SUPT16H-207ENST00000557394 SLC39A2Q9NP94 309 aa11.57□□□□□ -0.56
SUPT16H-207ENST00000557394 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.57□□□□□ -0.561e-7■■■■□ 21.6
SUPT16H-207ENST00000557394 BIN2Q9UBW5 565 aaPredicted RBP11.57□□□□□ -0.56
SUPT16H-207ENST00000557394 CEP131Q9UPN4 1083 aa11.57□□□□□ -0.56
SUPT16H-207ENST00000557394 SPATA31A6Q5VVP1 1343 aa11.57□□□□□ -0.56
SUPT16H-207ENST00000557394 BTBD18B2RXH4 712 aa11.57□□□□□ -0.56
SUPT16H-207ENST00000557394 PAEPP09466 180 aa11.57□□□□□ -0.56
SUPT16H-207ENST00000557394 HSPA1LP34931 641 aa11.57□□□□□ -0.56
SUPT16H-207ENST00000557394 UBXN1Q04323 297 aa11.57□□□□□ -0.56
SUPT16H-207ENST00000557394 BZW1Q7L1Q6 419 aaKnown RBP11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms