RNA–Protein interactions for RNA: ENST00000556687.5

RBM23-222, Transcript of RNA binding motif protein 23, human

TSL 2

Gene RBM23, Length 1,124 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RBM23-222	ENST00000556687	GRM4	Q14833	912 aa		14.27	□□□□□ -0.13
RBM23-222	ENST00000556687	SNX17	Q15036	470 aa		14.27	□□□□□ -0.13
RBM23-222	ENST00000556687	TRIM60	Q495X7	471 aa		14.27	□□□□□ -0.13
RBM23-222	ENST00000556687	TSEN34	Q9BSV6	310 aa	Known RBP	14.27	□□□□□ -0.13
RBM23-222	ENST00000556687	ADD3	Q9UEY8	706 aa	Known RBP	14.27	□□□□□ -0.13
RBM23-222	ENST00000556687	RANBP2	P49792	3224 aa	Known RBP	14.27	□□□□□ -0.13
RBM23-222	ENST00000556687	ABCB11	O95342	1321 aa		14.26	□□□□□ -0.13
RBM23-222	ENST00000556687	PRC1	O43663	620 aa		14.26	□□□□□ -0.13
RBM23-222	ENST00000556687	PPP1R11	O60927	126 aa	Predicted RBP	14.26	□□□□□ -0.13
RBM23-222	ENST00000556687	CDC45	O75419	566 aa		14.26	□□□□□ -0.13
RBM23-222	ENST00000556687	SMPD1	P17405	629 aa		14.26	□□□□□ -0.13
RBM23-222	ENST00000556687	BEX3	Q00994	111 aa		14.26	□□□□□ -0.13
RBM23-222	ENST00000556687	SART3	Q15020	963 aa	Known RBP	14.26	□□□□□ -0.13
RBM23-222	ENST00000556687	GNAS	Q5JWF2	1037 aa		14.26	□□□□□ -0.13
RBM23-222	ENST00000556687	NOL8	Q76FK4	1167 aa	Known RBP	14.26	□□□□□ -0.13
RBM23-222	ENST00000556687	FBXO11	Q86XK2	927 aa		14.26	□□□□□ -0.13
RBM23-222	ENST00000556687	RGS22	Q8NE09	1264 aa		14.26	□□□□□ -0.13
RBM23-222	ENST00000556687	MTMR8	Q96EF0	704 aa		14.26	□□□□□ -0.13
RBM23-222	ENST00000556687	UPF3A	Q9H1J1	476 aa	Known RBP	14.26	□□□□□ -0.13
RBM23-222	ENST00000556687	LY9	Q9HBG7	655 aa		14.26	□□□□□ -0.13
RBM23-222	ENST00000556687	GNE	Q9Y223	722 aa	Known RBP	14.26	□□□□□ -0.13
RBM23-222	ENST00000556687	CYTH3	O43739	400 aa		14.25	□□□□□ -0.13
RBM23-222	ENST00000556687	ASGR1	P07306	291 aa		14.25	□□□□□ -0.13
RBM23-222	ENST00000556687	CST5	P28325	142 aa	Predicted RBP	14.25	□□□□□ -0.13
RBM23-222	ENST00000556687	MDM2	Q00987	491 aa	Predicted RBP	14.25	□□□□□ -0.13
RBM23-222	ENST00000556687	TLE2	Q04725	743 aa		14.25	□□□□□ -0.13
RBM23-222	ENST00000556687	IQSEC1	Q6DN90	963 aa		14.25	□□□□□ -0.13
RBM23-222	ENST00000556687	SYTL5	Q8TDW5	730 aa	Predicted RBP	14.25	□□□□□ -0.13
RBM23-222	ENST00000556687	TAAR1	Q96RJ0	339 aa		14.25	□□□□□ -0.13
RBM23-222	ENST00000556687	PIGS	Q96S52	555 aa		14.25	□□□□□ -0.13
RBM23-222	ENST00000556687	MYL10	Q9BUA6	226 aa		14.25	□□□□□ -0.13
RBM23-222	ENST00000556687	AMN	Q9BXJ7	453 aa		14.25	□□□□□ -0.13
RBM23-222	ENST00000556687	RIOX1	Q9H6W3	641 aa		14.25	□□□□□ -0.13
RBM23-222	ENST00000556687	SPC25	Q9HBM1	224 aa		14.25	□□□□□ -0.13
RBM23-222	ENST00000556687	VTA1	Q9NP79	307 aa		14.25	□□□□□ -0.13
RBM23-222	ENST00000556687	COL20A1	Q9P218	1284 aa		14.25	□□□□□ -0.13
RBM23-222	ENST00000556687	MOXD2P	A6NHM9	499 aa		14.24	□□□□□ -0.13
RBM23-222	ENST00000556687	OPLAH	O14841	1288 aa		14.24	□□□□□ -0.13
RBM23-222	ENST00000556687	ZBTB5	O15062	677 aa		14.24	□□□□□ -0.13
RBM23-222	ENST00000556687	DYNC1LI2	O43237	492 aa	Predicted RBP	14.24	□□□□□ -0.13
RBM23-222	ENST00000556687	NEFL	P07196	543 aa		14.24	□□□□□ -0.13
RBM23-222	ENST00000556687	MCM5	P33992	734 aa		14.24	□□□□□ -0.13
RBM23-222	ENST00000556687	BMP8B	P34820	402 aa		14.24	□□□□□ -0.13
RBM23-222	ENST00000556687	NKX3-2	P78367	333 aa		14.24	□□□□□ -0.13
RBM23-222	ENST00000556687	C1orf53	Q5VUE5	145 aa		14.24	□□□□□ -0.13
RBM23-222	ENST00000556687	CASC1	Q6TDU7	716 aa		14.24	□□□□□ -0.13
RBM23-222	ENST00000556687	SH3RF1	Q7Z6J0	888 aa		14.24	□□□□□ -0.13
RBM23-222	ENST00000556687	CATIP	Q7Z7H3	387 aa		14.24	□□□□□ -0.13
RBM23-222	ENST00000556687	HOMER1	Q86YM7	354 aa		14.24	□□□□□ -0.13
RBM23-222	ENST00000556687	DNER	Q8NFT8	737 aa		14.24	□□□□□ -0.13
RBM23-222	ENST00000556687	NUP133	Q8WUM0	1156 aa		14.24	□□□□□ -0.13
RBM23-222	ENST00000556687	LRRC2	Q9BYS8	371 aa		14.24	□□□□□ -0.13
RBM23-222	ENST00000556687	STARD7	Q9NQZ5	370 aa		14.24	□□□□□ -0.13
RBM23-222	ENST00000556687	MRPL11	Q9Y3B7	192 aa	Known RBP	14.24	□□□□□ -0.13
RBM23-222	ENST00000556687	LOC102724159	A0A0B4J2E5	919 aa		14.23	□□□□□ -0.13
RBM23-222	ENST00000556687	RBM47	A0AV96	593 aa	Known RBP	14.23	□□□□□ -0.13
RBM23-222	ENST00000556687	SH2B2	O14492	632 aa	Predicted RBP	14.23	□□□□□ -0.13
RBM23-222	ENST00000556687	EDNRB	P24530	442 aa		14.23	□□□□□ -0.13
RBM23-222	ENST00000556687	PDE4D	Q08499	809 aa		14.23	□□□□□ -0.13
RBM23-222	ENST00000556687	PWP2	Q15269	919 aa	Known RBP	14.23	□□□□□ -0.13
RBM23-222	ENST00000556687	TLK2	Q86UE8	772 aa		14.23	□□□□□ -0.13
RBM23-222	ENST00000556687	RASEF	Q8IZ41	740 aa		14.23	□□□□□ -0.13
RBM23-222	ENST00000556687	ZNF654	Q8IZM8	581 aa		14.23	□□□□□ -0.13
RBM23-222	ENST00000556687	PCSK9	Q8NBP7	692 aa	Known RBP	14.23	□□□□□ -0.13
RBM23-222	ENST00000556687	PIBF1	Q8WXW3	757 aa		14.23	□□□□□ -0.13
RBM23-222	ENST00000556687	MTA3	Q9BTC8	594 aa		14.23	□□□□□ -0.13
RBM23-222	ENST00000556687	WDR11	Q9BZH6	1224 aa		14.23	□□□□□ -0.13
RBM23-222	ENST00000556687	AP5M1	Q9H0R1	490 aa		14.23	□□□□□ -0.13
RBM23-222	ENST00000556687	PRDM5	Q9NQX1	630 aa	Predicted RBP	14.23	□□□□□ -0.13
RBM23-222	ENST00000556687	PDLIM7	Q9NR12	457 aa		14.23	□□□□□ -0.13
RBM23-222	ENST00000556687	PCDHA1	Q9Y5I3	950 aa		14.23	□□□□□ -0.13
RBM23-222	ENST00000556687	TRIM43B	A6NCK2	446 aa		14.22	□□□□□ -0.13
RBM23-222	ENST00000556687	CFB	P00751	764 aa		14.22	□□□□□ -0.13
RBM23-222	ENST00000556687	RXRA	P19793	462 aa		14.22	□□□□□ -0.13
RBM23-222	ENST00000556687	DUSP28	Q4G0W2	176 aa		14.22	□□□□□ -0.13
RBM23-222	ENST00000556687	NFXL1	Q6ZNB6	911 aa		14.22	□□□□□ -0.13
RBM23-222	ENST00000556687	MCF2L2	Q86YR7	1114 aa		14.22	□□□□□ -0.13
RBM23-222	ENST00000556687	RAB11FIP4	Q86YS3	637 aa		14.22	□□□□□ -0.13
RBM23-222	ENST00000556687	VTI1A	Q96AJ9	217 aa		14.22	□□□□□ -0.13
RBM23-222	ENST00000556687	TRIM43	Q96BQ3	446 aa	Predicted RBP	14.22	□□□□□ -0.13
RBM23-222	ENST00000556687	TMEM87B	Q96K49	555 aa		14.22	□□□□□ -0.13
RBM23-222	ENST00000556687	GLT1D1	Q96MS3	346 aa		14.22	□□□□□ -0.13
RBM23-222	ENST00000556687	UBE2O	Q9C0C9	1292 aa	Known RBP	14.22	□□□□□ -0.13
RBM23-222	ENST00000556687	PRKAG2	Q9UGJ0	569 aa		14.22	□□□□□ -0.13
RBM23-222	ENST00000556687	ELP1	O95163	1332 aa		14.21	□□□□□ -0.13
RBM23-222	ENST00000556687	LTBP2	Q14767	1821 aa		14.21	□□□□□ -0.13
RBM23-222	ENST00000556687		A0A1W2PPC1	479 aa		14.21	□□□□□ -0.13
RBM23-222	ENST00000556687	CCDC69	A6NI79	296 aa		14.21	□□□□□ -0.13
RBM23-222	ENST00000556687	SOX1	O00570	391 aa	Predicted RBP	14.21	□□□□□ -0.13
RBM23-222	ENST00000556687	PQBP1	O60828	265 aa	Known RBP	14.21	□□□□□ -0.13
RBM23-222	ENST00000556687	CDK7	P50613	346 aa		14.21	□□□□□ -0.13
RBM23-222	ENST00000556687	FSCN1	Q16658	493 aa	Known RBP	14.21	□□□□□ -0.13
RBM23-222	ENST00000556687	ADCK5	Q3MIX3	580 aa		14.21	□□□□□ -0.13
RBM23-222	ENST00000556687	CXCL17	Q6UXB2	119 aa		14.21	□□□□□ -0.13
RBM23-222	ENST00000556687	TMTC2	Q8N394	836 aa		14.21	□□□□□ -0.13
RBM23-222	ENST00000556687	COPS5	Q92905	334 aa		14.21	□□□□□ -0.13
RBM23-222	ENST00000556687	NEK1	Q96PY6	1258 aa		14.21	□□□□□ -0.13
RBM23-222	ENST00000556687	RMDN3	Q96TC7	470 aa		14.21	□□□□□ -0.13
RBM23-222	ENST00000556687	MAP3K14	Q99558	947 aa		14.21	□□□□□ -0.13
RBM23-222	ENST00000556687	LBHD1	Q9BQE6	289 aa	Predicted RBP	14.21	□□□□□ -0.13

Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms