RNA–Protein interactions for RNA: ENST00000556636.5

GABRB3-211, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 2

Gene GABRB3, Length 501 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-211ENST00000556636 DNM1LO00429 736 aa12.44□□□□□ -0.42
GABRB3-211ENST00000556636 ADAMTS4O75173 837 aa12.44□□□□□ -0.42
GABRB3-211ENST00000556636 PGK1P00558 417 aa12.44□□□□□ -0.42
GABRB3-211ENST00000556636 CALM1P0DP23 149 aa12.44□□□□□ -0.42
GABRB3-211ENST00000556636 CALM2P0DP24 149 aa12.44□□□□□ -0.42
GABRB3-211ENST00000556636 CALM3P0DP25 149 aa12.44□□□□□ -0.42
GABRB3-211ENST00000556636 AKR1A1P14550 325 aa12.44□□□□□ -0.42
GABRB3-211ENST00000556636 RPS6KB1P23443 525 aa12.44□□□□□ -0.42
GABRB3-211ENST00000556636 KIF5BP33176 963 aa12.44□□□□□ -0.42
GABRB3-211ENST00000556636 GNAQP50148 359 aa12.44□□□□□ -0.42
GABRB3-211ENST00000556636 IRX5P78411 483 aaPredicted RBP12.44□□□□□ -0.42
GABRB3-211ENST00000556636 FUT2Q10981 343 aa12.44□□□□□ -0.42
GABRB3-211ENST00000556636 PWP2Q15269 919 aaKnown RBP12.44□□□□□ -0.42
GABRB3-211ENST00000556636 LRRC41Q15345 812 aa12.44□□□□□ -0.42
GABRB3-211ENST00000556636 GJC2Q5T442 439 aaPredicted RBP12.44□□□□□ -0.42
GABRB3-211ENST00000556636 Q6ZUG5 572 aa12.44□□□□□ -0.42
GABRB3-211ENST00000556636 MCF2L2Q86YR7 1114 aa12.44□□□□□ -0.42
GABRB3-211ENST00000556636 ARRDC4Q8NCT1 418 aa12.44□□□□□ -0.42
GABRB3-211ENST00000556636 DNERQ8NFT8 737 aa12.44□□□□□ -0.42
GABRB3-211ENST00000556636 CTCFLQ8NI51 663 aaPredicted RBP12.44□□□□□ -0.42
GABRB3-211ENST00000556636 LZTS2Q9BRK4 669 aa12.44□□□□□ -0.42
GABRB3-211ENST00000556636 C11orf49Q9H6J7 331 aa12.44□□□□□ -0.42
GABRB3-211ENST00000556636 ADD3Q9UEY8 706 aaKnown RBP12.44□□□□□ -0.42
GABRB3-211ENST00000556636 ZHX1Q9UKY1 873 aaPredicted RBP12.44□□□□□ -0.42
GABRB3-211ENST00000556636 BAZ2BQ9UIF8 2168 aaKnown RBP12.44□□□□□ -0.42
GABRB3-211ENST00000556636 PLXNA1Q9UIW2 1896 aa12.43□□□□□ -0.42
GABRB3-211ENST00000556636 CTAGE5O15320 804 aa12.43□□□□□ -0.42
GABRB3-211ENST00000556636 DUSP11O75319 330 aaKnown RBP12.43□□□□□ -0.42
GABRB3-211ENST00000556636 SEC24BO95487 1268 aa12.43□□□□□ -0.42
GABRB3-211ENST00000556636 RARBP10826 455 aa12.43□□□□□ -0.42
GABRB3-211ENST00000556636 PTGS1P23219 599 aa12.43□□□□□ -0.42
GABRB3-211ENST00000556636 ADCYAP1R1P41586 468 aa12.43□□□□□ -0.42
GABRB3-211ENST00000556636 HSD17B4P51659 736 aa12.43□□□□□ -0.42
GABRB3-211ENST00000556636 NKX3-2P78367 333 aa12.43□□□□□ -0.42
GABRB3-211ENST00000556636 CCSAPQ6IQ19 270 aaPredicted RBP12.43□□□□□ -0.42
GABRB3-211ENST00000556636 BLOC1S2Q6QNY1 142 aa12.43□□□□□ -0.42
GABRB3-211ENST00000556636 TMTC3Q6ZXV5 915 aa12.43□□□□□ -0.42
GABRB3-211ENST00000556636 MICU3Q86XE3 530 aa12.43□□□□□ -0.42
GABRB3-211ENST00000556636 KLHDC9Q8NEP7 349 aa12.43□□□□□ -0.42
GABRB3-211ENST00000556636 PIBF1Q8WXW3 757 aa12.43□□□□□ -0.42
GABRB3-211ENST00000556636 HTATIP2Q9BUP3 242 aa12.43□□□□□ -0.42
GABRB3-211ENST00000556636 GNEQ9Y223 722 aaKnown RBP12.43□□□□□ -0.42
GABRB3-211ENST00000556636 RBM47A0AV96 593 aaKnown RBP12.42□□□□□ -0.42
GABRB3-211ENST00000556636 SMPD1P17405 629 aa12.42□□□□□ -0.42
GABRB3-211ENST00000556636 CASTP20810 708 aaKnown RBP12.42□□□□□ -0.42
GABRB3-211ENST00000556636 PSMA5P28066 241 aa12.42□□□□□ -0.42
GABRB3-211ENST00000556636 CDC27P30260 824 aa12.42□□□□□ -0.42
GABRB3-211ENST00000556636 EVCP57679 992 aa12.42□□□□□ -0.42
GABRB3-211ENST00000556636 APOBRQ0VD83 1088 aa12.42□□□□□ -0.42
GABRB3-211ENST00000556636 IQSEC1Q6DN90 963 aa12.42□□□□□ -0.42
GABRB3-211ENST00000556636 SYNE3Q6ZMZ3 975 aa12.42□□□□□ -0.42
GABRB3-211ENST00000556636 RUFY3Q7L099 469 aa12.42□□□□□ -0.42
GABRB3-211ENST00000556636 EEPD1Q7L9B9 569 aa12.42□□□□□ -0.42
GABRB3-211ENST00000556636 FBXO16Q8IX29 292 aaPredicted RBP12.42□□□□□ -0.42
GABRB3-211ENST00000556636 CCDC82Q8N4S0 544 aa12.42□□□□□ -0.42
GABRB3-211ENST00000556636 SAMD3Q8N6K7 520 aa12.42□□□□□ -0.42
GABRB3-211ENST00000556636 DPF3Q92784 378 aa12.42□□□□□ -0.42
GABRB3-211ENST00000556636 TM6SF1Q9BZW5 370 aa12.42□□□□□ -0.42
GABRB3-211ENST00000556636 SENP6Q9GZR1 1112 aaPredicted RBP12.42□□□□□ -0.42
GABRB3-211ENST00000556636 XPNPEP3Q9NQH7 507 aa12.42□□□□□ -0.42
GABRB3-211ENST00000556636 MAP3K20Q9NYL2 800 aaKnown RBP12.42□□□□□ -0.42
GABRB3-211ENST00000556636 KLF18A0A0U1RQI7 1052 aa12.41□□□□□ -0.42
GABRB3-211ENST00000556636 hCG_1642624A0A1W2PR95 340 aa12.41□□□□□ -0.42
GABRB3-211ENST00000556636 MYADML2A6NDP7 307 aa12.41□□□□□ -0.42
GABRB3-211ENST00000556636 ZBTB43O43298 467 aa12.41□□□□□ -0.42
GABRB3-211ENST00000556636 CFBP00751 764 aa12.41□□□□□ -0.42
GABRB3-211ENST00000556636 ADD1P35611 737 aaKnown RBP12.41□□□□□ -0.42
GABRB3-211ENST00000556636 RCAN1P53805 252 aa12.41□□□□□ -0.42
GABRB3-211ENST00000556636 GJA9P57773 515 aa12.41□□□□□ -0.42
GABRB3-211ENST00000556636 TNFAIP2Q03169 654 aa12.41□□□□□ -0.42
GABRB3-211ENST00000556636 TOB2Q14106 344 aaPredicted RBP12.41□□□□□ -0.42
GABRB3-211ENST00000556636 LRRC26Q2I0M4 334 aa12.41□□□□□ -0.42
GABRB3-211ENST00000556636 PRPF38BQ5VTL8 546 aaKnown RBP12.41□□□□□ -0.42
GABRB3-211ENST00000556636 BRF1Q92994 677 aa12.41□□□□□ -0.42
GABRB3-211ENST00000556636 RRP36Q96EU6 259 aaKnown RBP12.41□□□□□ -0.42
GABRB3-211ENST00000556636 IL17RAQ96F46 866 aa12.41□□□□□ -0.42
GABRB3-211ENST00000556636 RMDN3Q96TC7 470 aa12.41□□□□□ -0.42
GABRB3-211ENST00000556636 UPF3AQ9H1J1 476 aaKnown RBP12.41□□□□□ -0.42
GABRB3-211ENST00000556636 VTA1Q9NP79 307 aa12.41□□□□□ -0.42
GABRB3-211ENST00000556636 DNAH12Q6ZR08 3092 aa12.41□□□□□ -0.42
GABRB3-211ENST00000556636 LCTP09848 1927 aa12.41□□□□□ -0.42
GABRB3-211ENST00000556636 SYNRGQ9UMZ2 1314 aa12.4□□□□□ -0.42
GABRB3-211ENST00000556636 H0YGN5 161 aa12.4□□□□□ -0.42
GABRB3-211ENST00000556636 HOXA13P31271 388 aaPredicted RBP12.4□□□□□ -0.42
GABRB3-211ENST00000556636 TRAF1Q13077 416 aa12.4□□□□□ -0.42
GABRB3-211ENST00000556636 RTN1Q16799 776 aa12.4□□□□□ -0.42
GABRB3-211ENST00000556636 RNF180Q86T96 592 aa12.4□□□□□ -0.42
GABRB3-211ENST00000556636 NSUN6Q8TEA1 469 aaKnown RBP12.4□□□□□ -0.42
GABRB3-211ENST00000556636 IWS1Q96ST2 819 aa12.4□□□□□ -0.42
GABRB3-211ENST00000556636 TSEN34Q9BSV6 310 aaKnown RBP12.4□□□□□ -0.42
GABRB3-211ENST00000556636 PXMP2Q9NR77 195 aa12.4□□□□□ -0.42
GABRB3-211ENST00000556636 RBM28Q9NW13 759 aaKnown RBP12.4□□□□□ -0.42
GABRB3-211ENST00000556636 PHF24Q9UPV7 400 aa12.4□□□□□ -0.42
GABRB3-211ENST00000556636 MCM3APO60318 1980 aa12.39□□□□□ -0.43
GABRB3-211ENST00000556636 CNTNAP5Q8WYK1 1306 aa12.39□□□□□ -0.43
GABRB3-211ENST00000556636 GOLGA8AA7E2F4 631 aa12.39□□□□□ -0.43
GABRB3-211ENST00000556636 GOLGA8BA8MQT2 603 aa12.39□□□□□ -0.43
GABRB3-211ENST00000556636 GCOM1H8Y6P7 765 aaPredicted RBP12.39□□□□□ -0.43
GABRB3-211ENST00000556636 MEIS2O14770 477 aa12.39□□□□□ -0.43
GABRB3-211ENST00000556636 DYNC1LI2O43237 492 aaPredicted RBP12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms