RNA–Protein interactions for RNA: ENST00000556498.1

TDP1-215, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 3

Gene TDP1, Length 597 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-215ENST00000556498 HDAC9Q9UKV0 1011 aa6.95□□□□□ -1.3
TDP1-215ENST00000556498 FAM184BQ9ULE4 1060 aa6.95□□□□□ -1.3
TDP1-215ENST00000556498 TPCN1Q9ULQ1 816 aa6.95□□□□□ -1.3
TDP1-215ENST00000556498 PAIP2BQ9ULR5 123 aaKnown RBP6.95□□□□□ -1.3
TDP1-215ENST00000556498 NSFL1CQ9UNZ2 370 aaKnown RBP6.95□□□□□ -1.3
TDP1-215ENST00000556498 PRELID1Q9Y255 219 aa6.95□□□□□ -1.3
TDP1-215ENST00000556498 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP6.95□□□□□ -1.3
TDP1-215ENST00000556498 UHRF1BP1LA0JNW5 1464 aa6.95□□□□□ -1.3
TDP1-215ENST00000556498 C2orf81A6NN90 581 aa6.94□□□□□ -1.3
TDP1-215ENST00000556498 PHF20L1A8MW92 1017 aa6.94□□□□□ -1.3
TDP1-215ENST00000556498 EIF3CLB5ME19 914 aaKnown RBP6.94□□□□□ -1.3
TDP1-215ENST00000556498 M0QX08 132 aa6.94□□□□□ -1.3
TDP1-215ENST00000556498 SLC26A4O43511 780 aa6.94□□□□□ -1.3
TDP1-215ENST00000556498 CYTH3O43739 400 aa6.94□□□□□ -1.3
TDP1-215ENST00000556498 B3GALNT1O75752 331 aa6.94□□□□□ -1.3
TDP1-215ENST00000556498 STAMBPO95630 424 aa6.94□□□□□ -1.3
TDP1-215ENST00000556498 POLR3DP05423 398 aaPredicted RBP6.94□□□□□ -1.3
TDP1-215ENST00000556498 ARAFP10398 606 aa6.94□□□□□ -1.3
TDP1-215ENST00000556498 FERP16591 822 aa6.94□□□□□ -1.3
TDP1-215ENST00000556498 HOXC13P31276 330 aa6.94□□□□□ -1.3
TDP1-215ENST00000556498 HSPA1LP34931 641 aa6.94□□□□□ -1.3
TDP1-215ENST00000556498 HSPA4P34932 840 aa6.94□□□□□ -1.3
TDP1-215ENST00000556498 ACTN2P35609 894 aa6.94□□□□□ -1.3
TDP1-215ENST00000556498 GNL1P36915 607 aaPredicted RBP6.94□□□□□ -1.3
TDP1-215ENST00000556498 CCT6AP40227 531 aaKnown RBP6.94□□□□□ -1.3
TDP1-215ENST00000556498 KIF11P52732 1056 aa6.94□□□□□ -1.3
TDP1-215ENST00000556498 PCBP4P57723 403 aaKnown RBP6.94□□□□□ -1.3
TDP1-215ENST00000556498 ZNF445P59923 1031 aa6.94□□□□□ -1.3
TDP1-215ENST00000556498 ROR2Q01974 943 aaKnown RBP6.94□□□□□ -1.3
TDP1-215ENST00000556498 STK3Q13188 491 aa6.94□□□□□ -1.3
TDP1-215ENST00000556498 DYNC1I2Q13409 638 aaKnown RBP6.94□□□□□ -1.3
TDP1-215ENST00000556498 CUL4BQ13620 913 aa6.94□□□□□ -1.3
TDP1-215ENST00000556498 SMC1AQ14683 1233 aaKnown RBP6.94□□□□□ -1.3
TDP1-215ENST00000556498 TNIP1Q15025 636 aa6.94□□□□□ -1.3
TDP1-215ENST00000556498 IRGCQ6NXR0 463 aa6.94□□□□□ -1.3
TDP1-215ENST00000556498 BRAPQ7Z569 592 aa6.94□□□□□ -1.3
TDP1-215ENST00000556498 TADA2BQ86TJ2 420 aa6.94□□□□□ -1.3
TDP1-215ENST00000556498 CCDC50Q8IVM0 306 aa6.94□□□□□ -1.3
TDP1-215ENST00000556498 RPAP2Q8IXW5 612 aaPredicted RBP6.94□□□□□ -1.3
TDP1-215ENST00000556498 SLC7A5P1Q8MH63 180 aa6.94□□□□□ -1.3
TDP1-215ENST00000556498 DCLK2Q8N568 766 aa6.94□□□□□ -1.3
TDP1-215ENST00000556498 TRIM58Q8NG06 486 aa6.94□□□□□ -1.3
TDP1-215ENST00000556498 TRPM4Q8TD43 1214 aa6.94□□□□□ -1.3
TDP1-215ENST00000556498 APPBP2Q92624 585 aa6.94□□□□□ -1.3
TDP1-215ENST00000556498 ZNF75CPQ92670 426 aaPredicted RBP6.94□□□□□ -1.3
TDP1-215ENST00000556498 IRF7Q92985 503 aa6.94□□□□□ -1.3
TDP1-215ENST00000556498 C8orf76Q96K31 380 aa6.94□□□□□ -1.3
TDP1-215ENST00000556498 C8orf48Q96LL4 319 aa6.94□□□□□ -1.3
TDP1-215ENST00000556498 ALS2CR12Q96Q35 445 aa6.94□□□□□ -1.3
TDP1-215ENST00000556498 EIF3CQ99613 913 aaKnown RBP6.94□□□□□ -1.3
TDP1-215ENST00000556498 CORO1BQ9BR76 489 aa6.94□□□□□ -1.3
TDP1-215ENST00000556498 FAM167BQ9BTA0 163 aa6.94□□□□□ -1.3
TDP1-215ENST00000556498 DNAI2Q9GZS0 605 aa6.94□□□□□ -1.3
TDP1-215ENST00000556498 CCDC113Q9H0I3 377 aa6.94□□□□□ -1.3
TDP1-215ENST00000556498 ABCG4Q9H172 646 aa6.94□□□□□ -1.3
TDP1-215ENST00000556498 KMT5AQ9NQR1 393 aa6.94□□□□□ -1.3
TDP1-215ENST00000556498 RNF19AQ9NV58 838 aa6.94□□□□□ -1.3
TDP1-215ENST00000556498 CLIC5Q9NZA1 410 aa6.94□□□□□ -1.3
TDP1-215ENST00000556498 TBX22Q9Y458 520 aa6.94□□□□□ -1.3
TDP1-215ENST00000556498 RPAP1Q9BWH6 1393 aaPredicted RBP6.94□□□□□ -1.3
TDP1-215ENST00000556498 LINC00854A0A1B0GVQ3 168 aa6.93□□□□□ -1.3
TDP1-215ENST00000556498 TMEM221A6NGB7 291 aa6.93□□□□□ -1.3
TDP1-215ENST00000556498 ZBTB42B2RXF5 422 aa6.93□□□□□ -1.3
TDP1-215ENST00000556498 SART1O43290 800 aaKnown RBP6.93□□□□□ -1.3
TDP1-215ENST00000556498 MAP2K3P46734 347 aa6.93□□□□□ -1.3
TDP1-215ENST00000556498 NRLP54845 237 aa6.93□□□□□ -1.3
TDP1-215ENST00000556498 SNX16P57768 344 aa6.93□□□□□ -1.3
TDP1-215ENST00000556498 LMNB2Q03252 620 aa6.93□□□□□ -1.3
TDP1-215ENST00000556498 HYAL2Q12891 473 aa6.93□□□□□ -1.3
TDP1-215ENST00000556498 RABL6Q3YEC7 729 aaPredicted RBP6.93□□□□□ -1.3
TDP1-215ENST00000556498 COL13A1Q5TAT6 717 aaPredicted RBP6.93□□□□□ -1.3
TDP1-215ENST00000556498 KAZNQ674X7 775 aa6.93□□□□□ -1.3
TDP1-215ENST00000556498 THOC7Q6I9Y2 204 aaKnown RBP6.93□□□□□ -1.3
TDP1-215ENST00000556498 KIAA0825Q8IV33 1275 aa6.93□□□□□ -1.3
TDP1-215ENST00000556498 THEMISQ8N1K5 641 aaPredicted RBP6.93□□□□□ -1.3
TDP1-215ENST00000556498 EPS8L3Q8TE67 593 aaKnown RBP6.93□□□□□ -1.3
TDP1-215ENST00000556498 SLC35B4Q969S0 331 aa6.93□□□□□ -1.3
TDP1-215ENST00000556498 GCC1Q96CN9 775 aa6.93□□□□□ -1.3
TDP1-215ENST00000556498 KANSL3Q9P2N6 904 aa6.93□□□□□ -1.3
TDP1-215ENST00000556498 TBK1Q9UHD2 729 aa6.93□□□□□ -1.3
TDP1-215ENST00000556498 PGAP2Q9UHJ9 254 aa6.93□□□□□ -1.3
TDP1-215ENST00000556498 EVLQ9UI08 416 aaPredicted RBP6.93□□□□□ -1.3
TDP1-215ENST00000556498 MRFAP1Q9Y605 127 aa6.93□□□□□ -1.3
TDP1-215ENST00000556498 ROCK2O75116 1388 aaKnown RBP6.93□□□□□ -1.3
TDP1-215ENST00000556498 CFTRP13569 1480 aa6.92□□□□□ -1.3
TDP1-215ENST00000556498 LOC102724428A0A0B4J2F2 783 aa6.92□□□□□ -1.3
TDP1-215ENST00000556498 SMTNL1A8MU46 457 aa6.92□□□□□ -1.3
TDP1-215ENST00000556498 C19orf81C9J6K1 198 aa6.92□□□□□ -1.3
TDP1-215ENST00000556498 AKR1B10O60218 316 aa6.92□□□□□ -1.3
TDP1-215ENST00000556498 KPNA6O60684 536 aa6.92□□□□□ -1.3
TDP1-215ENST00000556498 ATP6V1G1O75348 118 aa6.92□□□□□ -1.3
TDP1-215ENST00000556498 ERLIN2O94905 339 aa6.92□□□□□ -1.3
TDP1-215ENST00000556498 EDN3P14138 238 aa6.92□□□□□ -1.3
TDP1-215ENST00000556498 ADH6P28332 368 aa6.92□□□□□ -1.3
TDP1-215ENST00000556498 IRS1P35568 1242 aa6.92□□□□□ -1.3
TDP1-215ENST00000556498 SIK1P57059 783 aa6.92□□□□□ -1.3
TDP1-215ENST00000556498 TUBA4AP68366 448 aa6.92□□□□□ -1.3
TDP1-215ENST00000556498 GPLD1P80108 840 aa6.92□□□□□ -1.3
TDP1-215ENST00000556498 DAB2P98082 770 aa6.92□□□□□ -1.3
TDP1-215ENST00000556498 KRT76Q01546 638 aa6.92□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms