RNA–Protein interactions for RNA: ENST00000556303.1

SNX6-207, Transcript of sorting nexin 6, humanhuman

TSL 2

Gene SNX6, Length 539 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-207ENST00000556303 ERICH2A1L162 156 aa14.71□□□□□ -0.05
SNX6-207ENST00000556303 TRIM43BA6NCK2 446 aa14.71□□□□□ -0.05
SNX6-207ENST00000556303 NKRFO15226 690 aaKnown RBP eCLIP14.71□□□□□ -0.05
SNX6-207ENST00000556303 CTAGE5O15320 804 aa14.71□□□□□ -0.05
SNX6-207ENST00000556303 SMPD1P17405 629 aa14.71□□□□□ -0.05
SNX6-207ENST00000556303 EDNRBP24530 442 aa14.71□□□□□ -0.05
SNX6-207ENST00000556303 PTH1RQ03431 593 aa14.71□□□□□ -0.05
SNX6-207ENST00000556303 CDC37Q16543 378 aaPredicted RBP14.71□□□□□ -0.05
SNX6-207ENST00000556303 DUSP28Q4G0W2 176 aa14.71□□□□□ -0.05
SNX6-207ENST00000556303 NOL8Q76FK4 1167 aaKnown RBP14.71□□□□□ -0.05
SNX6-207ENST00000556303 TLK2Q86UE8 772 aa14.71□□□□□ -0.05
SNX6-207ENST00000556303 TRIM43Q96BQ3 446 aaPredicted RBP14.71□□□□□ -0.05
SNX6-207ENST00000556303 PRDM5Q9NQX1 630 aaPredicted RBP14.71□□□□□ -0.05
SNX6-207ENST00000556303 MAP3K20Q9NYL2 800 aaKnown RBP14.71□□□□□ -0.05
SNX6-207ENST00000556303 MRPL11Q9Y3B7 192 aaKnown RBP14.71□□□□□ -0.05
SNX6-207ENST00000556303 C11orf97A0A1B0GVM6 126 aaPredicted RBP14.7□□□□□ -0.06
SNX6-207ENST00000556303 MYADML2A6NDP7 307 aa14.7□□□□□ -0.06
SNX6-207ENST00000556303 ARVCFO00192 962 aa14.7□□□□□ -0.06
SNX6-207ENST00000556303 SOX1O00570 391 aaPredicted RBP14.7□□□□□ -0.06
SNX6-207ENST00000556303 DYNC1LI2O43237 492 aaPredicted RBP14.7□□□□□ -0.06
SNX6-207ENST00000556303 PQBP1O60828 265 aaKnown RBP14.7□□□□□ -0.06
SNX6-207ENST00000556303 FSCN1Q16658 493 aaKnown RBP14.7□□□□□ -0.06
SNX6-207ENST00000556303 KIAA1211Q6ZU35 1233 aa14.7□□□□□ -0.06
SNX6-207ENST00000556303 CENPQQ7L2Z9 268 aaPredicted RBP14.7□□□□□ -0.06
SNX6-207ENST00000556303 RALYLQ86SE5 291 aaKnown RBP14.7□□□□□ -0.06
SNX6-207ENST00000556303 FBXO11Q86XK2 927 aa14.7□□□□□ -0.06
SNX6-207ENST00000556303 FBXO16Q8IX29 292 aaPredicted RBP14.7□□□□□ -0.06
SNX6-207ENST00000556303 MTMR8Q96EF0 704 aa14.7□□□□□ -0.06
SNX6-207ENST00000556303 TMEM39AQ9NV64 488 aa14.7□□□□□ -0.06
SNX6-207ENST00000556303 PALM3A6NDB9 673 aaPredicted RBP14.69□□□□□ -0.06
SNX6-207ENST00000556303 E7EWF7 191 aa14.69□□□□□ -0.06
SNX6-207ENST00000556303 CALML3P27482 149 aa14.69□□□□□ -0.06
SNX6-207ENST00000556303 FAAP100Q0VG06 881 aa14.69□□□□□ -0.06
SNX6-207ENST00000556303 QRICH1Q2TAL8 776 aa14.69□□□□□ -0.06
SNX6-207ENST00000556303 USH1GQ495M9 461 aa14.69□□□□□ -0.06
SNX6-207ENST00000556303 BRDTQ58F21 947 aaPredicted RBP14.69□□□□□ -0.06
SNX6-207ENST00000556303 SLC30A10Q6XR72 485 aa14.69□□□□□ -0.06
SNX6-207ENST00000556303 CYB5R4Q7L1T6 521 aa14.69□□□□□ -0.06
SNX6-207ENST00000556303 SH3RF1Q7Z6J0 888 aa14.69□□□□□ -0.06
SNX6-207ENST00000556303 SLC43A3Q8NBI5 491 aa14.69□□□□□ -0.06
SNX6-207ENST00000556303 BADQ92934 168 aa14.69□□□□□ -0.06
SNX6-207ENST00000556303 VTI1AQ96AJ9 217 aa14.69□□□□□ -0.06
SNX6-207ENST00000556303 IWS1Q96ST2 819 aa14.69□□□□□ -0.06
SNX6-207ENST00000556303 MAP3K14Q99558 947 aa14.69□□□□□ -0.06
SNX6-207ENST00000556303 WDR11Q9BZH6 1224 aa14.69□□□□□ -0.06
SNX6-207ENST00000556303 JMJD4Q9H9V9 463 aa14.69□□□□□ -0.06
SNX6-207ENST00000556303 PDGFCQ9NRA1 345 aa14.69□□□□□ -0.06
SNX6-207ENST00000556303 KLRF2D3W0D1 207 aa14.68□□□□□ -0.06
SNX6-207ENST00000556303 IFIT3O14879 490 aaKnown RBP14.68□□□□□ -0.06
SNX6-207ENST00000556303 TLR3O15455 904 aaKnown RBP14.68□□□□□ -0.06
SNX6-207ENST00000556303 TIMP1P01033 207 aa14.68□□□□□ -0.06
SNX6-207ENST00000556303 RAG1P15918 1043 aa14.68□□□□□ -0.06
SNX6-207ENST00000556303 GHRHRQ02643 423 aa14.68□□□□□ -0.06
SNX6-207ENST00000556303 PDE4DQ08499 809 aa14.68□□□□□ -0.06
SNX6-207ENST00000556303 WTAPQ15007 396 aa14.68□□□□□ -0.06
SNX6-207ENST00000556303 FAM109BQ6ICB4 259 aaPredicted RBP14.68□□□□□ -0.06
SNX6-207ENST00000556303 EEPD1Q7L9B9 569 aa14.68□□□□□ -0.06
SNX6-207ENST00000556303 NSUN6Q8TEA1 469 aaKnown RBP14.68□□□□□ -0.06
SNX6-207ENST00000556303 SCFD2Q8WU76 684 aa14.68□□□□□ -0.06
SNX6-207ENST00000556303 LRCH3Q96II8 777 aa14.68□□□□□ -0.06
SNX6-207ENST00000556303 PURBQ96QR8 312 aaKnown RBP14.68□□□□□ -0.06
SNX6-207ENST00000556303 AMNQ9BXJ7 453 aa14.68□□□□□ -0.06
SNX6-207ENST00000556303 MAD2L2Q9UI95 211 aa14.68□□□□□ -0.06
SNX6-207ENST00000556303 LTBP2Q14767 1821 aa14.68□□□□□ -0.06
SNX6-207ENST00000556303 LCTP09848 1927 aa14.68□□□□□ -0.06
SNX6-207ENST00000556303 ZBTB5O15062 677 aa14.67□□□□□ -0.06
SNX6-207ENST00000556303 DHX16O60231 1041 aaKnown RBP14.67□□□□□ -0.06
SNX6-207ENST00000556303 KPNA6O60684 536 aa14.67□□□□□ -0.06
SNX6-207ENST00000556303 CPT1AP50416 773 aa14.67□□□□□ -0.06
SNX6-207ENST00000556303 BMP2KLQ5H9B9 411 aa14.67□□□□□ -0.06
SNX6-207ENST00000556303 FAM126BQ8IXS8 530 aa14.67□□□□□ -0.06
SNX6-207ENST00000556303 TMTC2Q8N394 836 aa14.67□□□□□ -0.06
SNX6-207ENST00000556303 RNF39Q9H2S5 420 aa14.67□□□□□ -0.06
SNX6-207ENST00000556303 CPVLQ9H3G5 476 aa14.67□□□□□ -0.06
SNX6-207ENST00000556303 RIOX1Q9H6W3 641 aa14.67□□□□□ -0.06
SNX6-207ENST00000556303 POLR3EQ9NVU0 708 aa14.67□□□□□ -0.06
SNX6-207ENST00000556303 TBX21Q9UL17 535 aa14.67□□□□□ -0.06
SNX6-207ENST00000556303 RBM8AQ9Y5S9 174 aaKnown RBP14.67□□□□□ -0.06
SNX6-207ENST00000556303 CD4P01730 458 aa14.66□□□□□ -0.06
SNX6-207ENST00000556303 SMARCA1P28370 1054 aa14.66□□□□□ -0.06
SNX6-207ENST00000556303 BEX3Q00994 111 aa14.66□□□□□ -0.06
SNX6-207ENST00000556303 TROAPQ12815 778 aa14.66□□□□□ -0.06
SNX6-207ENST00000556303 ITGA7Q13683 1181 aa14.66□□□□□ -0.06
SNX6-207ENST00000556303 TTLL4Q14679 1199 aa14.66□□□□□ -0.06
SNX6-207ENST00000556303 GRM4Q14833 912 aa14.66□□□□□ -0.06
SNX6-207ENST00000556303 PPP2R5BQ15173 497 aa14.66□□□□□ -0.06
SNX6-207ENST00000556303 CATIPQ7Z7H3 387 aa14.66□□□□□ -0.06
SNX6-207ENST00000556303 STAG2Q8N3U4 1231 aa14.66□□□□□ -0.06
SNX6-207ENST00000556303 SYTL5Q8TDW5 730 aaPredicted RBP14.66□□□□□ -0.06
SNX6-207ENST00000556303 IGDCC4Q8TDY8 1250 aa14.66□□□□□ -0.06
SNX6-207ENST00000556303 VAT1LQ9HCJ6 419 aa14.66□□□□□ -0.06
SNX6-207ENST00000556303 MYH6P13533 1939 aa14.65□□□□□ -0.06
SNX6-207ENST00000556303 ITGB8P26012 769 aa14.65□□□□□ -0.06
SNX6-207ENST00000556303 HSD17B4P51659 736 aa14.65□□□□□ -0.06
SNX6-207ENST00000556303 IRX5P78411 483 aaPredicted RBP14.65□□□□□ -0.06
SNX6-207ENST00000556303 FPGSQ05932 587 aa14.65□□□□□ -0.06
SNX6-207ENST00000556303 SHHQ15465 462 aa14.65□□□□□ -0.06
SNX6-207ENST00000556303 STXBP2Q15833 593 aa14.65□□□□□ -0.06
SNX6-207ENST00000556303 MFSD5Q6N075 450 aa14.65□□□□□ -0.06
SNX6-207ENST00000556303 CXCL17Q6UXB2 119 aa14.65□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms