RNA–Protein interactions for RNA: ENST00000556203.1

ACTN1-217, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 564 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-217ENST00000556203 GJC2Q5T442 439 aaPredicted RBP17.61■□□□□ 0.41
ACTN1-217ENST00000556203 Q6ZUG5 572 aa17.61■□□□□ 0.41
ACTN1-217ENST00000556203 EEPD1Q7L9B9 569 aa17.61■□□□□ 0.41
ACTN1-217ENST00000556203 CMTR1Q8N1G2 835 aaKnown RBP17.61■□□□□ 0.41
ACTN1-217ENST00000556203 ARRDC4Q8NCT1 418 aa17.61■□□□□ 0.41
ACTN1-217ENST00000556203 SYTL5Q8TDW5 730 aaPredicted RBP17.61■□□□□ 0.41
ACTN1-217ENST00000556203 DPF3Q92784 378 aa17.61■□□□□ 0.41
ACTN1-217ENST00000556203 RRP36Q96EU6 259 aaKnown RBP17.61■□□□□ 0.41
ACTN1-217ENST00000556203 XPNPEP3Q9NQH7 507 aa17.61■□□□□ 0.41
ACTN1-217ENST00000556203 KLF18A0A0U1RQI7 1052 aa17.6■□□□□ 0.41
ACTN1-217ENST00000556203 DNM1LO00429 736 aa17.6■□□□□ 0.41
ACTN1-217ENST00000556203 ZBTB43O43298 467 aa17.6■□□□□ 0.41
ACTN1-217ENST00000556203 TRAF1Q13077 416 aa17.6■□□□□ 0.41
ACTN1-217ENST00000556203 CCDC144BQ3MJ40 725 aa17.6■□□□□ 0.41
ACTN1-217ENST00000556203 TMTC3Q6ZXV5 915 aa17.6■□□□□ 0.41
ACTN1-217ENST00000556203 FBXO16Q8IX29 292 aaPredicted RBP17.6■□□□□ 0.41
ACTN1-217ENST00000556203 DNERQ8NFT8 737 aa17.6■□□□□ 0.41
ACTN1-217ENST00000556203 MORC4Q8TE76 937 aa17.6■□□□□ 0.41
ACTN1-217ENST00000556203 MAF1Q9H063 256 aa17.6■□□□□ 0.41
ACTN1-217ENST00000556203 SEC63Q9UGP8 760 aaKnown RBP17.6■□□□□ 0.41
ACTN1-217ENST00000556203 NAP1L2Q9ULW6 460 aaPredicted RBP17.6■□□□□ 0.41
ACTN1-217ENST00000556203 SMCHD1A6NHR9 2005 aa17.6■□□□□ 0.41
ACTN1-217ENST00000556203 LOC102724159A0A0B4J2E5 919 aa17.59■□□□□ 0.41
ACTN1-217ENST00000556203 OPLAHO14841 1288 aa17.59■□□□□ 0.41
ACTN1-217ENST00000556203 PGK1P00558 417 aa17.59■□□□□ 0.41
ACTN1-217ENST00000556203 CFBP00751 764 aa17.59■□□□□ 0.41
ACTN1-217ENST00000556203 COL6A1P12109 1028 aa17.59■□□□□ 0.41
ACTN1-217ENST00000556203 PWP2Q15269 919 aaKnown RBP17.59■□□□□ 0.41
ACTN1-217ENST00000556203 LRRC41Q15345 812 aa17.59■□□□□ 0.41
ACTN1-217ENST00000556203 RTN1Q16799 776 aa17.59■□□□□ 0.41
ACTN1-217ENST00000556203 CCDC82Q8N4S0 544 aa17.59■□□□□ 0.41
ACTN1-217ENST00000556203 BRF1Q92994 677 aa17.59■□□□□ 0.41
ACTN1-217ENST00000556203 MPHOSPH6Q99547 160 aaKnown RBP17.59■□□□□ 0.41
ACTN1-217ENST00000556203 RBM28Q9NW13 759 aaKnown RBP17.59■□□□□ 0.41
ACTN1-217ENST00000556203 COL20A1Q9P218 1284 aa17.59■□□□□ 0.41
ACTN1-217ENST00000556203 GOLGA8AA7E2F4 631 aa17.58■□□□□ 0.4
ACTN1-217ENST00000556203 GOLGA8BA8MQT2 603 aa17.58■□□□□ 0.4
ACTN1-217ENST00000556203 KBTBD13C9JR72 458 aa17.58■□□□□ 0.4
ACTN1-217ENST00000556203 ADCY6O43306 1168 aa17.58■□□□□ 0.4
ACTN1-217ENST00000556203 ADCYAP1R1P41586 468 aa17.58■□□□□ 0.4
ACTN1-217ENST00000556203 APOBRQ0VD83 1088 aa17.58■□□□□ 0.4
ACTN1-217ENST00000556203 TAAR1Q96RJ0 339 aa17.58■□□□□ 0.4
ACTN1-217ENST00000556203 SENP6Q9GZR1 1112 aaPredicted RBP17.58■□□□□ 0.4
ACTN1-217ENST00000556203 ZSWIM6Q9HCJ5 1215 aa17.58■□□□□ 0.4
ACTN1-217ENST00000556203 VTA1Q9NP79 307 aa17.58■□□□□ 0.4
ACTN1-217ENST00000556203 PDGFCQ9NRA1 345 aa17.58■□□□□ 0.4
ACTN1-217ENST00000556203 SYNRGQ9UMZ2 1314 aa17.57■□□□□ 0.4
ACTN1-217ENST00000556203 C11orf97A0A1B0GVM6 126 aaPredicted RBP17.57■□□□□ 0.4
ACTN1-217ENST00000556203 DUSP11O75319 330 aaKnown RBP17.57■□□□□ 0.4
ACTN1-217ENST00000556203 EDNRBP24530 442 aa17.57■□□□□ 0.4
ACTN1-217ENST00000556203 HSD17B4P51659 736 aa17.57■□□□□ 0.4
ACTN1-217ENST00000556203 GHRHRQ02643 423 aa17.57■□□□□ 0.4
ACTN1-217ENST00000556203 TNFAIP2Q03169 654 aa17.57■□□□□ 0.4
ACTN1-217ENST00000556203 PDE4DQ08499 809 aa17.57■□□□□ 0.4
ACTN1-217ENST00000556203 PRPF38BQ5VTL8 546 aaKnown RBP17.57■□□□□ 0.4
ACTN1-217ENST00000556203 TAPT1Q6NXT6 567 aa17.57■□□□□ 0.4
ACTN1-217ENST00000556203 NOL8Q76FK4 1167 aaKnown RBP17.57■□□□□ 0.4
ACTN1-217ENST00000556203 RUFY3Q7L099 469 aa17.57■□□□□ 0.4
ACTN1-217ENST00000556203 RNF180Q86T96 592 aa17.57■□□□□ 0.4
ACTN1-217ENST00000556203 NSUN6Q8TEA1 469 aaKnown RBP17.57■□□□□ 0.4
ACTN1-217ENST00000556203 RMDN3Q96TC7 470 aa17.57■□□□□ 0.4
ACTN1-217ENST00000556203 hCG_1642624A0A1W2PR95 340 aa17.56■□□□□ 0.4
ACTN1-217ENST00000556203 B4DLN1 442 aa17.56■□□□□ 0.4
ACTN1-217ENST00000556203 GCOM1H8Y6P7 765 aaPredicted RBP17.56■□□□□ 0.4
ACTN1-217ENST00000556203 EVI5O60447 810 aa17.56■□□□□ 0.4
ACTN1-217ENST00000556203 ADAMTS4O75173 837 aa17.56■□□□□ 0.4
ACTN1-217ENST00000556203 POLR2MP0CAP2 368 aa17.56■□□□□ 0.4
ACTN1-217ENST00000556203 HOXA13P31271 388 aaPredicted RBP17.56■□□□□ 0.4
ACTN1-217ENST00000556203 METAP2P50579 478 aaKnown RBP eCLIP17.56■□□□□ 0.4
ACTN1-217ENST00000556203 MRPL12P52815 198 aaKnown RBP17.56■□□□□ 0.4
ACTN1-217ENST00000556203 RCAN1P53805 252 aa17.56■□□□□ 0.4
ACTN1-217ENST00000556203 FBXL16Q8N461 479 aa17.56■□□□□ 0.4
ACTN1-217ENST00000556203 SAMD3Q8N6K7 520 aa17.56■□□□□ 0.4
ACTN1-217ENST00000556203 AGXT2Q9BYV1 514 aa17.56■□□□□ 0.4
ACTN1-217ENST00000556203 UPF3BQ9BZI7 483 aaKnown RBP17.56■□□□□ 0.4
ACTN1-217ENST00000556203 TM6SF1Q9BZW5 370 aa17.56■□□□□ 0.4
ACTN1-217ENST00000556203 MAP3K20Q9NYL2 800 aaKnown RBP17.56■□□□□ 0.4
ACTN1-217ENST00000556203 CYP46A1Q9Y6A2 500 aa17.56■□□□□ 0.4
ACTN1-217ENST00000556203 LCTP09848 1927 aa17.55■□□□□ 0.4
ACTN1-217ENST00000556203 CNTNAP5Q8WYK1 1306 aa17.55■□□□□ 0.4
ACTN1-217ENST00000556203 EIF5BO60841 1220 aaKnown RBP17.55■□□□□ 0.4
ACTN1-217ENST00000556203 SMPD1P17405 629 aa17.55■□□□□ 0.4
ACTN1-217ENST00000556203 EIF2AK2P19525 551 aaKnown RBP17.55■□□□□ 0.4
ACTN1-217ENST00000556203 CDC27P30260 824 aa17.55■□□□□ 0.4
ACTN1-217ENST00000556203 ARHGEF16Q5VV41 709 aa17.55■□□□□ 0.4
ACTN1-217ENST00000556203 IQSEC1Q6DN90 963 aa17.55■□□□□ 0.4
ACTN1-217ENST00000556203 FAM217BQ9NTX9 383 aaPredicted RBP17.55■□□□□ 0.4
ACTN1-217ENST00000556203 GNEQ9Y223 722 aaKnown RBP17.55■□□□□ 0.4
ACTN1-217ENST00000556203 FRMPD3Q5JV73 1810 aa17.54■□□□□ 0.4
ACTN1-217ENST00000556203 MYADML2A6NDP7 307 aa17.54■□□□□ 0.4
ACTN1-217ENST00000556203 C6orf222P0C671 652 aaPredicted RBP17.54■□□□□ 0.4
ACTN1-217ENST00000556203 PTGS1P23219 599 aa17.54■□□□□ 0.4
ACTN1-217ENST00000556203 ATN1P54259 1190 aaPredicted RBP17.54■□□□□ 0.4
ACTN1-217ENST00000556203 IRX5P78411 483 aaPredicted RBP17.54■□□□□ 0.4
ACTN1-217ENST00000556203 LRRC26Q2I0M4 334 aa17.54■□□□□ 0.4
ACTN1-217ENST00000556203 TLK2Q86UE8 772 aa17.54■□□□□ 0.4
ACTN1-217ENST00000556203 KLHDC9Q8NEP7 349 aa17.54■□□□□ 0.4
ACTN1-217ENST00000556203 FERMT2Q96AC1 680 aa17.54■□□□□ 0.4
ACTN1-217ENST00000556203 IWS1Q96ST2 819 aa17.54■□□□□ 0.4
ACTN1-217ENST00000556203 UPF3AQ9H1J1 476 aaKnown RBP17.54■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms