RNA–Protein interactions for RNA: ENST00000555964.5

XRCC3-215, Transcript of X-ray repair cross complementing 3, humanhuman

TSL 4

Gene XRCC3, Length 562 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-215ENST00000555964 BAATQ14032 418 aaPredicted RBP19.96■□□□□ 0.79
XRCC3-215ENST00000555964 RRP12Q5JTH9 1297 aaKnown RBP19.96■□□□□ 0.79
XRCC3-215ENST00000555964 USP38Q8NB14 1042 aa19.96■□□□□ 0.79
XRCC3-215ENST00000555964 ATXN2LQ8WWM7 1075 aaKnown RBP19.96■□□□□ 0.79
XRCC3-215ENST00000555964 WDR11Q9BZH6 1224 aa19.96■□□□□ 0.79
XRCC3-215ENST00000555964 ALDH8A1Q9H2A2 487 aaPredicted RBP19.96■□□□□ 0.79
XRCC3-215ENST00000555964 PRDM12Q9H4Q4 367 aa19.96■□□□□ 0.79
XRCC3-215ENST00000555964 PRDM6Q9NQX0 595 aa19.96■□□□□ 0.79
XRCC3-215ENST00000555964 TCP11L1Q9NUJ3 509 aa19.96■□□□□ 0.79
XRCC3-215ENST00000555964 MCMDC2Q4G0Z9 681 aa19.95■□□□□ 0.78
XRCC3-215ENST00000555964 ANKRD45Q5TZF3 282 aa19.95■□□□□ 0.78
XRCC3-215ENST00000555964 OTOP2Q7RTS6 562 aa19.95■□□□□ 0.78
XRCC3-215ENST00000555964 TRPV6Q9H1D0 765 aa19.95■□□□□ 0.78
XRCC3-215ENST00000555964 TSPYL2Q9H2G4 693 aaPredicted RBP19.95■□□□□ 0.78
XRCC3-215ENST00000555964 THEGQ9P2T0 379 aa19.95■□□□□ 0.78
XRCC3-215ENST00000555964 SLC4A7Q9Y6M7 1214 aa19.95■□□□□ 0.78
XRCC3-215ENST00000555964 GRIN2DO15399 1336 aa19.95■□□□□ 0.78
XRCC3-215ENST00000555964 SALL3Q9BXA9 1300 aa19.95■□□□□ 0.78
XRCC3-215ENST00000555964 KPNA6O60684 536 aa19.94■□□□□ 0.78
XRCC3-215ENST00000555964 NT5C2P49902 561 aa19.94■□□□□ 0.78
XRCC3-215ENST00000555964 CCL23P55773 120 aa19.94■□□□□ 0.78
XRCC3-215ENST00000555964 VPS53Q5VIR6 699 aa19.94■□□□□ 0.78
XRCC3-215ENST00000555964 IL27Q8NEV9 243 aa19.94■□□□□ 0.78
XRCC3-215ENST00000555964 OR6J1Q8NGC5 347 aa19.94■□□□□ 0.78
XRCC3-215ENST00000555964 TMEM47Q9BQJ4 181 aa19.94■□□□□ 0.78
XRCC3-215ENST00000555964 INCENPQ9NQS7 918 aa19.94■□□□□ 0.78
XRCC3-215ENST00000555964 CXXC1Q9P0U4 656 aaPredicted RBP19.94■□□□□ 0.78
XRCC3-215ENST00000555964 WDR19Q8NEZ3 1342 aa19.94■□□□□ 0.78
XRCC3-215ENST00000555964 NFIBO00712 420 aa19.93■□□□□ 0.78
XRCC3-215ENST00000555964 ACTN1P12814 892 aa19.93■□□□□ 0.78
XRCC3-215ENST00000555964 SLC16A2P36021 539 aa19.93■□□□□ 0.78
XRCC3-215ENST00000555964 MFAP1P55081 439 aaKnown RBP19.93■□□□□ 0.78
XRCC3-215ENST00000555964 PSMC6P62333 389 aa19.93■□□□□ 0.78
XRCC3-215ENST00000555964 PDE4DQ08499 809 aa19.93■□□□□ 0.78
XRCC3-215ENST00000555964 PPP2R5BQ15173 497 aa19.93■□□□□ 0.78
XRCC3-215ENST00000555964 TTBK2Q6IQ55 1244 aa19.93■□□□□ 0.78
XRCC3-215ENST00000555964 RNF207Q6ZRF8 634 aa19.93■□□□□ 0.78
XRCC3-215ENST00000555964 RASGRP2Q7LDG7 609 aa19.93■□□□□ 0.78
XRCC3-215ENST00000555964 DNERQ8NFT8 737 aa19.93■□□□□ 0.78
XRCC3-215ENST00000555964 TTC14Q96N46 770 aa19.93■□□□□ 0.78
XRCC3-215ENST00000555964 MTG1Q9BT17 334 aaPredicted RBP19.93■□□□□ 0.78
XRCC3-215ENST00000555964 NKX2-4Q9H2Z4 354 aa19.93■□□□□ 0.78
XRCC3-215ENST00000555964 RNF41Q9H4P4 317 aaPredicted RBP19.93■□□□□ 0.78
XRCC3-215ENST00000555964 TNKSO95271 1327 aa19.93■□□□□ 0.78
XRCC3-215ENST00000555964 UMODL1Q5DID0 1318 aa19.93■□□□□ 0.78
XRCC3-215ENST00000555964 FRMPD2Q68DX3 1309 aaPredicted RBP19.93■□□□□ 0.78
XRCC3-215ENST00000555964 TANC1Q9C0D5 1861 aa19.92■□□□□ 0.78
XRCC3-215ENST00000555964 MYH6P13533 1939 aa19.92■□□□□ 0.78
XRCC3-215ENST00000555964 RBM47A0AV96 593 aaKnown RBP19.92■□□□□ 0.78
XRCC3-215ENST00000555964 ZBBXA8MT70 800 aa19.92■□□□□ 0.78
XRCC3-215ENST00000555964 TNFRSF10AO00220 468 aa19.92■□□□□ 0.78
XRCC3-215ENST00000555964 FGAP02671 866 aa19.92■□□□□ 0.78
XRCC3-215ENST00000555964 MYL3P08590 195 aa19.92■□□□□ 0.78
XRCC3-215ENST00000555964 PDHBP11177 359 aa19.92■□□□□ 0.78
XRCC3-215ENST00000555964 IGFBP4P22692 258 aa19.92■□□□□ 0.78
XRCC3-215ENST00000555964 CALML3P27482 149 aa19.92■□□□□ 0.78
XRCC3-215ENST00000555964 RFC2P35250 354 aa19.92■□□□□ 0.78
XRCC3-215ENST00000555964 PDE1AP54750 535 aa19.92■□□□□ 0.78
XRCC3-215ENST00000555964 PURAQ00577 322 aaKnown RBP19.92■□□□□ 0.78
XRCC3-215ENST00000555964 PPP2R2DQ66LE6 453 aa19.92■□□□□ 0.78
XRCC3-215ENST00000555964 SCFD2Q8WU76 684 aa19.92■□□□□ 0.78
XRCC3-215ENST00000555964 PPM1EQ8WY54 764 aa19.92■□□□□ 0.78
XRCC3-215ENST00000555964 WNT8AQ9H1J5 351 aa19.92■□□□□ 0.78
XRCC3-215ENST00000555964 GPCPD1Q9NPB8 672 aa19.92■□□□□ 0.78
XRCC3-215ENST00000555964 PCDHA11Q9Y5I1 949 aa19.92■□□□□ 0.78
XRCC3-215ENST00000555964 HSPD1P10809 573 aaKnown RBP19.91■□□□□ 0.78
XRCC3-215ENST00000555964 GPATCH4Q5T3I0 446 aaKnown RBP19.91■□□□□ 0.78
XRCC3-215ENST00000555964 NFRKBQ6P4R8 1299 aa19.91■□□□□ 0.78
XRCC3-215ENST00000555964 MFSD6Q6ZSS7 791 aa19.91■□□□□ 0.78
XRCC3-215ENST00000555964 MAF1Q9H063 256 aa19.91■□□□□ 0.78
XRCC3-215ENST00000555964 DDX49Q9Y6V7 483 aaKnown RBP19.91■□□□□ 0.78
XRCC3-215ENST00000555964 SCN5AQ14524 2016 aa19.9■□□□□ 0.78
XRCC3-215ENST00000555964 ATP2A2P16615 1042 aaKnown RBP19.9■□□□□ 0.78
XRCC3-215ENST00000555964 PTGS1P23219 599 aa19.9■□□□□ 0.78
XRCC3-215ENST00000555964 MRPS5P82675 430 aaKnown RBP19.9■□□□□ 0.78
XRCC3-215ENST00000555964 PTPN11Q06124 597 aaPredicted RBP19.9■□□□□ 0.78
XRCC3-215ENST00000555964 ZNF543Q08ER8 600 aa19.9■□□□□ 0.78
XRCC3-215ENST00000555964 FAM47CQ5HY64 1035 aa19.9■□□□□ 0.78
XRCC3-215ENST00000555964 SLC30A10Q6XR72 485 aa19.9■□□□□ 0.78
XRCC3-215ENST00000555964 PURBQ96QR8 312 aaKnown RBP19.9■□□□□ 0.78
XRCC3-215ENST00000555964 TRMT13Q9NUP7 481 aaKnown RBP19.9■□□□□ 0.78
XRCC3-215ENST00000555964 YBX2Q9Y2T7 364 aaKnown RBP19.9■□□□□ 0.78
XRCC3-215ENST00000555964 CCDC171Q6TFL3 1326 aa19.9■□□□□ 0.78
XRCC3-215ENST00000555964 LAMA4Q16363 1823 aa19.9■□□□□ 0.78
XRCC3-215ENST00000555964 SPTBN5Q9NRC6 3674 aaKnown RBP19.9■□□□□ 0.78
XRCC3-215ENST00000555964 A0A0D9SFI3 127 aa19.89■□□□□ 0.77
XRCC3-215ENST00000555964 PITPNM1O00562 1244 aa19.89■□□□□ 0.77
XRCC3-215ENST00000555964 RPS6P62753 249 aaKnown RBP19.89■□□□□ 0.77
XRCC3-215ENST00000555964 HDAC1Q13547 482 aaPredicted RBP19.89■□□□□ 0.77
XRCC3-215ENST00000555964 TTLL4Q14679 1199 aa19.89■□□□□ 0.77
XRCC3-215ENST00000555964 CCDC178Q5BJE1 867 aa19.89■□□□□ 0.77
XRCC3-215ENST00000555964 RETREG2Q8NC44 543 aa19.89■□□□□ 0.77
XRCC3-215ENST00000555964 CLEC4DQ8WXI8 215 aa19.89■□□□□ 0.77
XRCC3-215ENST00000555964 ESR2Q92731 530 aa19.89■□□□□ 0.77
XRCC3-215ENST00000555964 SCLYQ96I15 445 aa19.89■□□□□ 0.77
XRCC3-215ENST00000555964 FAM227BQ96M60 508 aa19.89■□□□□ 0.77
XRCC3-215ENST00000555964 ASB2Q96Q27 587 aa19.89■□□□□ 0.77
XRCC3-215ENST00000555964 SLC9A7Q96T83 725 aa19.89■□□□□ 0.77
XRCC3-215ENST00000555964 SNHG28P0DPA3 235 aa19.88■□□□□ 0.77
XRCC3-215ENST00000555964 EDNRBP24530 442 aa19.88■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms