RNA–Protein interactions for RNA: ENST00000555816.5

ATXN3-233, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 760 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-233ENST00000555816 LMNB2Q03252 620 aa7.06□□□□□ -1.28
ATXN3-233ENST00000555816 GPR162Q16538 588 aa7.06□□□□□ -1.28
ATXN3-233ENST00000555816 PTF1AQ7RTS3 328 aa7.06□□□□□ -1.28
ATXN3-233ENST00000555816 DTWD2Q8NBA8 298 aa7.06□□□□□ -1.28
ATXN3-233ENST00000555816 PHC3Q8NDX5 983 aa7.06□□□□□ -1.28
ATXN3-233ENST00000555816 GATAD2BQ8WXI9 593 aa7.06□□□□□ -1.28
ATXN3-233ENST00000555816 JARID2Q92833 1246 aaPredicted RBP7.06□□□□□ -1.28
ATXN3-233ENST00000555816 KCNN1Q92952 543 aa7.06□□□□□ -1.28
ATXN3-233ENST00000555816 PARP2Q9UGN5 583 aa7.06□□□□□ -1.28
ATXN3-233ENST00000555816 KNDC1Q76NI1 1749 aa7.05□□□□□ -1.28
ATXN3-233ENST00000555816 OVOS2A0A0G2JMS6 1433 aa7.05□□□□□ -1.28
ATXN3-233ENST00000555816 OVOS2A0A0J9YW53 1432 aa7.05□□□□□ -1.28
ATXN3-233ENST00000555816 OVOS2Q6IE36 1432 aa7.05□□□□□ -1.28
ATXN3-233ENST00000555816 TCAF2A6NFQ2 919 aa7.05□□□□□ -1.28
ATXN3-233ENST00000555816 CHRNEQ04844 493 aa7.05□□□□□ -1.28
ATXN3-233ENST00000555816 EGR3Q06889 387 aa7.05□□□□□ -1.28
ATXN3-233ENST00000555816 PSMD2Q13200 908 aa7.05□□□□□ -1.28
ATXN3-233ENST00000555816 PWP1Q13610 501 aa7.05□□□□□ -1.28
ATXN3-233ENST00000555816 KCNA10Q16322 511 aa7.05□□□□□ -1.28
ATXN3-233ENST00000555816 CIAPIN1Q6FI81 312 aa7.05□□□□□ -1.28
ATXN3-233ENST00000555816 ATG14Q6ZNE5 492 aa7.05□□□□□ -1.28
ATXN3-233ENST00000555816 TOM1L2Q6ZVM7 507 aa7.05□□□□□ -1.28
ATXN3-233ENST00000555816 TMC4Q7Z404 712 aa7.05□□□□□ -1.28
ATXN3-233ENST00000555816 MARCH10Q8NA82 808 aaPredicted RBP7.05□□□□□ -1.28
ATXN3-233ENST00000555816 FAM13CQ8NE31 585 aa7.05□□□□□ -1.28
ATXN3-233ENST00000555816 ENOX1Q8TC92 643 aaKnown RBP7.05□□□□□ -1.28
ATXN3-233ENST00000555816 ASPNQ9BXN1 380 aa7.05□□□□□ -1.28
ATXN3-233ENST00000555816 SLC6A17Q9H1V8 727 aa7.05□□□□□ -1.28
ATXN3-233ENST00000555816 POLR3AO14802 1390 aaPredicted RBP7.05□□□□□ -1.28
ATXN3-233ENST00000555816 TNS1Q9HBL0 1735 aaKnown RBP7.04□□□□□ -1.28
ATXN3-233ENST00000555816 USP19O94966 1318 aa7.04□□□□□ -1.28
ATXN3-233ENST00000555816 CAMTA1Q9Y6Y1 1673 aa7.04□□□□□ -1.28
ATXN3-233ENST00000555816 FAM221AA4D161 298 aa7.04□□□□□ -1.28
ATXN3-233ENST00000555816 EXOC5O00471 708 aa7.04□□□□□ -1.28
ATXN3-233ENST00000555816 PEX10O60683 326 aa7.04□□□□□ -1.28
ATXN3-233ENST00000555816 ZGLP1P0C6A0 271 aa7.04□□□□□ -1.28
ATXN3-233ENST00000555816 DUSP4Q13115 394 aa7.04□□□□□ -1.28
ATXN3-233ENST00000555816 CAMK2GQ13555 558 aaPredicted RBP7.04□□□□□ -1.28
ATXN3-233ENST00000555816 MEI1Q5TIA1 1274 aa7.04□□□□□ -1.28
ATXN3-233ENST00000555816 LCNL1Q6ZST4 164 aa7.04□□□□□ -1.28
ATXN3-233ENST00000555816 RSRP1Q9BUV0 290 aa7.04□□□□□ -1.28
ATXN3-233ENST00000555816 TULP4Q9NRJ4 1543 aa7.04□□□□□ -1.28
ATXN3-233ENST00000555816 ATP7BP35670 1465 aa7.04□□□□□ -1.28
ATXN3-233ENST00000555816 BCL9O00512 1426 aa7.03□□□□□ -1.28
ATXN3-233ENST00000555816 CRB1P82279 1406 aa7.03□□□□□ -1.28
ATXN3-233ENST00000555816 RBM47A0AV96 593 aaKnown RBP7.03□□□□□ -1.28
ATXN3-233ENST00000555816 NPIPB6E9PJ23 425 aa7.03□□□□□ -1.28
ATXN3-233ENST00000555816 ETV2O00321 342 aaPredicted RBP7.03□□□□□ -1.28
ATXN3-233ENST00000555816 ERVFC1P60507 584 aa7.03□□□□□ -1.28
ATXN3-233ENST00000555816 RELL1Q8IUW5 271 aa7.03□□□□□ -1.28
ATXN3-233ENST00000555816 RGS22Q8NE09 1264 aa7.03□□□□□ -1.28
ATXN3-233ENST00000555816 CCDC74BQ96LY2 380 aa7.03□□□□□ -1.28
ATXN3-233ENST00000555816 SP110Q9HB58 689 aa7.03□□□□□ -1.28
ATXN3-233ENST00000555816 SMG5Q9UPR3 1016 aaKnown RBP7.03□□□□□ -1.28
ATXN3-233ENST00000555816 TLR6Q9Y2C9 796 aa7.03□□□□□ -1.28
ATXN3-233ENST00000555816 AATKQ6ZMQ8 1374 aa7.03□□□□□ -1.28
ATXN3-233ENST00000555816 MAP3K5Q99683 1374 aa7.03□□□□□ -1.28
ATXN3-233ENST00000555816 ALS2Q96Q42 1657 aa7.03□□□□□ -1.28
ATXN3-233ENST00000555816 ABCA3Q99758 1704 aa7.02□□□□□ -1.29
ATXN3-233ENST00000555816 TRPM3Q9HCF6 1732 aaPredicted RBP7.02□□□□□ -1.29
ATXN3-233ENST00000555816 LILRA6Q6PI73 481 aa7.02□□□□□ -1.29
ATXN3-233ENST00000555816 TTLL10Q6ZVT0 673 aa7.02□□□□□ -1.29
ATXN3-233ENST00000555816 CRELD1Q96HD1 420 aa7.02□□□□□ -1.29
ATXN3-233ENST00000555816 BRD4O60885 1362 aaPredicted RBP7.02□□□□□ -1.29
ATXN3-233ENST00000555816 WDR17Q8IZU2 1322 aa7.01□□□□□ -1.29
ATXN3-233ENST00000555816 RGPD8O14715 1765 aaPredicted RBP7.01□□□□□ -1.29
ATXN3-233ENST00000555816 RREB1Q92766 1687 aa7.01□□□□□ -1.29
ATXN3-233ENST00000555816 COL5A2P05997 1499 aaPredicted RBP7.01□□□□□ -1.29
ATXN3-233ENST00000555816 UPK3BL1B0FP48 263 aa7.01□□□□□ -1.29
ATXN3-233ENST00000555816 UPK3BL2E5RIL1 263 aa7.01□□□□□ -1.29
ATXN3-233ENST00000555816 GRIN3BO60391 1043 aa7.01□□□□□ -1.29
ATXN3-233ENST00000555816 SEMA7AO75326 666 aa7.01□□□□□ -1.29
ATXN3-233ENST00000555816 POLD1P28340 1107 aa7.01□□□□□ -1.29
ATXN3-233ENST00000555816 CCDC27Q2M243 656 aa7.01□□□□□ -1.29
ATXN3-233ENST00000555816 ANKS4BQ8N8V4 417 aa7.01□□□□□ -1.29
ATXN3-233ENST00000555816 TMEM74Q96NL1 305 aa7.01□□□□□ -1.29
ATXN3-233ENST00000555816 YBX2Q9Y2T7 364 aaKnown RBP7.01□□□□□ -1.29
ATXN3-233ENST00000555816 CORINQ9Y5Q5 1042 aa7.01□□□□□ -1.29
ATXN3-233ENST00000555816 ADGRB1O14514 1584 aa7□□□□□ -1.29
ATXN3-233ENST00000555816 WASH4PA8MWX3 477 aa7□□□□□ -1.29
ATXN3-233ENST00000555816 TNNI2P48788 182 aa7□□□□□ -1.29
ATXN3-233ENST00000555816 BNC2Q6ZN30 1099 aaPredicted RBP7□□□□□ -1.29
ATXN3-233ENST00000555816 KREMEN1Q96MU8 473 aa7□□□□□ -1.29
ATXN3-233ENST00000555816 RNF32Q9H0A6 362 aa7□□□□□ -1.29
ATXN3-233ENST00000555816 ZNF281Q9Y2X9 895 aa7□□□□□ -1.29
ATXN3-233ENST00000555816 PCDHA11Q9Y5I1 949 aa7□□□□□ -1.29
ATXN3-233ENST00000555816 NUP188Q5SRE5 1749 aa7□□□□□ -1.29
ATXN3-233ENST00000555816 IFT172Q9UG01 1749 aa7□□□□□ -1.29
ATXN3-233ENST00000555816 NRKQ7Z2Y5 1582 aa6.99□□□□□ -1.29
ATXN3-233ENST00000555816 F13A1P00488 732 aa6.99□□□□□ -1.29
ATXN3-233ENST00000555816 PF4P02776 101 aa6.99□□□□□ -1.29
ATXN3-233ENST00000555816 CTSHP09668 335 aa6.99□□□□□ -1.29
ATXN3-233ENST00000555816 ERCC3P19447 782 aa6.99□□□□□ -1.29
ATXN3-233ENST00000555816 MPP2Q14168 576 aa6.99□□□□□ -1.29
ATXN3-233ENST00000555816 ARHGEF25Q86VW2 580 aa6.99□□□□□ -1.29
ATXN3-233ENST00000555816 KCNH5Q8NCM2 988 aa6.99□□□□□ -1.29
ATXN3-233ENST00000555816 RHOVQ96L33 236 aa6.99□□□□□ -1.29
ATXN3-233ENST00000555816 ASCC2Q9H1I8 757 aaPredicted RBP6.99□□□□□ -1.29
ATXN3-233ENST00000555816 ZNF552Q9H707 407 aaPredicted RBP6.99□□□□□ -1.29
ATXN3-233ENST00000555816 RNF19AQ9NV58 838 aa6.99□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms