RNA–Protein interactions for RNA: ENST00000555752.1

SUPT16H-203, Transcript of SPT16 homolog, facilitates chromatin remodeling subunit, humanhuman

TSL 2

Gene SUPT16H, Length 888 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT16H-203ENST00000555752 KHSRPQ92945 711 aaKnown RBP eCLIP22.56■■□□□ 1.2
SUPT16H-203ENST00000555752 GMCL1Q96IK5 515 aa22.56■■□□□ 1.2
SUPT16H-203ENST00000555752 ZNF287Q9HBT7 754 aa22.56■■□□□ 1.2
SUPT16H-203ENST00000555752 ECHDC1Q9NTX5 307 aa22.56■■□□□ 1.2
SUPT16H-203ENST00000555752 DDX19BQ9UMR2 479 aa22.56■■□□□ 1.2
SUPT16H-203ENST00000555752 GTPBP6O43824 516 aaPredicted RBP22.55■■□□□ 1.2
SUPT16H-203ENST00000555752 IFNL3Q8IZI9 196 aa22.55■■□□□ 1.2
SUPT16H-203ENST00000555752 PRR12Q9ULL5 1215 aa22.55■■□□□ 1.2
SUPT16H-203ENST00000555752 RBAK-RBAKDNI3L0D1 243 aa22.54■■□□□ 1.2
SUPT16H-203ENST00000555752 TLL1O43897 1013 aa22.54■■□□□ 1.2
SUPT16H-203ENST00000555752 PFKMP08237 780 aa22.54■■□□□ 1.2
SUPT16H-203ENST00000555752 MYL3P08590 195 aa22.54■■□□□ 1.2
SUPT16H-203ENST00000555752 TAP1Q03518 808 aa22.54■■□□□ 1.2
SUPT16H-203ENST00000555752 VTA1Q9NP79 307 aa22.54■■□□□ 1.2
SUPT16H-203ENST00000555752 MTMR7Q9Y216 660 aa22.54■■□□□ 1.2
SUPT16H-203ENST00000555752 NMT2O60551 498 aa22.53■■□□□ 1.2
SUPT16H-203ENST00000555752 PURAQ00577 322 aaKnown RBP22.53■■□□□ 1.2
SUPT16H-203ENST00000555752 DUSP28Q4G0W2 176 aa22.53■■□□□ 1.2
SUPT16H-203ENST00000555752 MORC4Q8TE76 937 aa22.53■■□□□ 1.2
SUPT16H-203ENST00000555752 SEC62Q99442 399 aaKnown RBP22.53■■□□□ 1.2
SUPT16H-203ENST00000555752 WDR11Q9BZH6 1224 aa22.53■■□□□ 1.2
SUPT16H-203ENST00000555752 INCENPQ9NQS7 918 aa22.53■■□□□ 1.2
SUPT16H-203ENST00000555752 CCPG1Q9ULG6 757 aa22.53■■□□□ 1.2
SUPT16H-203ENST00000555752 PATL2C9JE40 543 aaKnown RBP22.52■■□□□ 1.2
SUPT16H-203ENST00000555752 SUPT20HL2P0C7V6 817 aa22.52■■□□□ 1.2
SUPT16H-203ENST00000555752 GNAT2P19087 354 aa22.52■■□□□ 1.2
SUPT16H-203ENST00000555752 FAM47CQ5HY64 1035 aa22.52■■□□□ 1.2
SUPT16H-203ENST00000555752 COL4A4P53420 1690 aaPredicted RBP22.52■■□□□ 1.2
SUPT16H-203ENST00000555752 PTPRSQ13332 1948 aa22.51■■□□□ 1.19
SUPT16H-203ENST00000555752 TET1Q8NFU7 2136 aa22.51■■□□□ 1.19
SUPT16H-203ENST00000555752 GRB10Q13322 594 aa22.51■■□□□ 1.19
SUPT16H-203ENST00000555752 BAATQ14032 418 aaPredicted RBP22.51■■□□□ 1.19
SUPT16H-203ENST00000555752 NBPF20Q3BBV1 942 aa22.51■■□□□ 1.19
SUPT16H-203ENST00000555752 RCSD1Q6JBY9 416 aa22.51■■□□□ 1.19
SUPT16H-203ENST00000555752 HERC6Q8IVU3 1022 aa22.51■■□□□ 1.19
SUPT16H-203ENST00000555752 SLC9A7Q96T83 725 aa22.51■■□□□ 1.19
SUPT16H-203ENST00000555752 POLR3EQ9NVU0 708 aa22.51■■□□□ 1.19
SUPT16H-203ENST00000555752 STX8Q9UNK0 236 aa22.51■■□□□ 1.19
SUPT16H-203ENST00000555752 COG5Q9UP83 839 aa22.51■■□□□ 1.19
SUPT16H-203ENST00000555752 TANC1Q9C0D5 1861 aa22.51■■□□□ 1.19
SUPT16H-203ENST00000555752 FAM86C2PA6NEL3 165 aa22.5■■□□□ 1.19
SUPT16H-203ENST00000555752 PLA2G6O60733 806 aa22.5■■□□□ 1.19
SUPT16H-203ENST00000555752 IQCF3P0C7M6 154 aa22.5■■□□□ 1.19
SUPT16H-203ENST00000555752 MS4A1P11836 297 aa22.5■■□□□ 1.19
SUPT16H-203ENST00000555752 ACTN1P12814 892 aa22.5■■□□□ 1.19
SUPT16H-203ENST00000555752 ALDH5A1P51649 535 aaPredicted RBP22.5■■□□□ 1.19
SUPT16H-203ENST00000555752 PDE4BQ07343 736 aa22.5■■□□□ 1.19
SUPT16H-203ENST00000555752 PPARAQ07869 468 aa22.5■■□□□ 1.19
SUPT16H-203ENST00000555752 TMCO2Q7Z6W1 182 aaPredicted RBP22.5■■□□□ 1.19
SUPT16H-203ENST00000555752 OR6J1Q8NGC5 347 aa22.5■■□□□ 1.19
SUPT16H-203ENST00000555752 MTG1Q9BT17 334 aaPredicted RBP22.5■■□□□ 1.19
SUPT16H-203ENST00000555752 FTOQ9C0B1 505 aaKnown RBP eCLIP22.5■■□□□ 1.19
SUPT16H-203ENST00000555752 C11orf16Q9NQ32 467 aa22.5■■□□□ 1.19
SUPT16H-203ENST00000555752 IL17RBQ9NRM6 502 aa22.5■■□□□ 1.19
SUPT16H-203ENST00000555752 HCN4Q9Y3Q4 1203 aa22.5■■□□□ 1.19
SUPT16H-203ENST00000555752 SCN10AQ9Y5Y9 1956 aa22.5■■□□□ 1.19
SUPT16H-203ENST00000555752 NFIBO00712 420 aa22.49■■□□□ 1.19
SUPT16H-203ENST00000555752 LPXNO60711 386 aa22.49■■□□□ 1.19
SUPT16H-203ENST00000555752 SLC16A2P36021 539 aa22.49■■□□□ 1.19
SUPT16H-203ENST00000555752 TMEM31Q5JXX7 168 aa22.49■■□□□ 1.19
SUPT16H-203ENST00000555752 TTBK2Q6IQ55 1244 aa22.49■■□□□ 1.19
SUPT16H-203ENST00000555752 HLA-CQ95604 372 aa22.49■■□□□ 1.19
SUPT16H-203ENST00000555752 LCHNA4D1U4 455 aa22.48■■□□□ 1.19
SUPT16H-203ENST00000555752 ICAM1P05362 532 aa22.48■■□□□ 1.19
SUPT16H-203ENST00000555752 ZFYP08048 801 aaPredicted RBP22.48■■□□□ 1.19
SUPT16H-203ENST00000555752 CPT1AP50416 773 aa22.48■■□□□ 1.19
SUPT16H-203ENST00000555752 SLC30A10Q6XR72 485 aa22.48■■□□□ 1.19
SUPT16H-203ENST00000555752 PHOSPHO2Q8TCD6 241 aa22.48■■□□□ 1.19
SUPT16H-203ENST00000555752 COPS5Q92905 334 aa22.48■■□□□ 1.19
SUPT16H-203ENST00000555752 CD320Q9NPF0 282 aa22.48■■□□□ 1.19
SUPT16H-203ENST00000555752 GPHNQ9NQX3 736 aaPredicted RBP22.48■■□□□ 1.19
SUPT16H-203ENST00000555752 RBM47A0AV96 593 aaKnown RBP22.47■■□□□ 1.19
SUPT16H-203ENST00000555752 RFC2P35250 354 aa22.47■■□□□ 1.19
SUPT16H-203ENST00000555752 CTDSPL2Q05D32 466 aa22.47■■□□□ 1.19
SUPT16H-203ENST00000555752 RETREG2Q8NC44 543 aa22.47■■□□□ 1.19
SUPT16H-203ENST00000555752 NACAP1Q9BZK3 213 aa22.47■■□□□ 1.19
SUPT16H-203ENST00000555752 NAPBQ9H115 298 aa22.47■■□□□ 1.19
SUPT16H-203ENST00000555752 DDX52Q9Y2R4 599 aaKnown RBP eCLIP22.47■■□□□ 1.19
SUPT16H-203ENST00000555752 CHMP4BP1P59074 171 aa22.46■■□□□ 1.19
SUPT16H-203ENST00000555752 CCDC96Q2M329 555 aa22.46■■□□□ 1.19
SUPT16H-203ENST00000555752 GDPD5Q8WTR4 605 aa22.46■■□□□ 1.19
SUPT16H-203ENST00000555752 RANBP17Q9H2T7 1088 aaKnown RBP22.46■■□□□ 1.19
SUPT16H-203ENST00000555752 ADD3Q9UEY8 706 aaKnown RBP22.46■■□□□ 1.19
SUPT16H-203ENST00000555752 TRIP12Q14669 1992 aaPredicted RBP22.45■■□□□ 1.18
SUPT16H-203ENST00000555752 PTPDC1A2A3K4 754 aa22.45■■□□□ 1.18
SUPT16H-203ENST00000555752 TSPY2A6NKD2 308 aa22.45■■□□□ 1.18
SUPT16H-203ENST00000555752 PITPNM1O00562 1244 aa22.45■■□□□ 1.18
SUPT16H-203ENST00000555752 FOXP2O15409 715 aa22.45■■□□□ 1.18
SUPT16H-203ENST00000555752 SLC3A2P08195 630 aaKnown RBP22.45■■□□□ 1.18
SUPT16H-203ENST00000555752 CALML3P27482 149 aa22.45■■□□□ 1.18
SUPT16H-203ENST00000555752 NFRKBQ6P4R8 1299 aa22.45■■□□□ 1.18
SUPT16H-203ENST00000555752 ARIH1Q9Y4X5 557 aaPredicted RBP22.45■■□□□ 1.18
SUPT16H-203ENST00000555752 KIF28PB7ZC32 967 aa22.44■■□□□ 1.18
SUPT16H-203ENST00000555752 GPNMBQ14956 572 aa22.44■■□□□ 1.18
SUPT16H-203ENST00000555752 FRMPD2Q68DX3 1309 aaPredicted RBP22.44■■□□□ 1.18
SUPT16H-203ENST00000555752 CLEC4DQ8WXI8 215 aa22.44■■□□□ 1.18
SUPT16H-203ENST00000555752 C20orf194Q5TEA3 1177 aa22.43■■□□□ 1.18
SUPT16H-203ENST00000555752 GPATCH3Q96I76 525 aa22.43■■□□□ 1.18
SUPT16H-203ENST00000555752 CTAGE1Q96RT6 745 aa22.43■■□□□ 1.18
SUPT16H-203ENST00000555752 BRWD1Q9NSI6 2320 aa22.43■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms