RNA–Protein interactions for RNA: ENST00000555628.5

PRKCH-218, Transcript of protein kinase C eta, humanhuman

TSL 4

Gene PRKCH, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-218ENST00000555628 TANC1Q9C0D5 1861 aa11□□□□□ -0.65
PRKCH-218ENST00000555628 ZNF318Q5VUA4 2279 aa11□□□□□ -0.65
PRKCH-218ENST00000555628 CFAP54Q96N23 3096 aa11□□□□□ -0.65
PRKCH-218ENST00000555628 MAGEB6P1A0A0J9YX57 407 aa11□□□□□ -0.65
PRKCH-218ENST00000555628 C6orf222P0C671 652 aaPredicted RBP11□□□□□ -0.65
PRKCH-218ENST00000555628 EEF2P13639 858 aaKnown RBP11□□□□□ -0.65
PRKCH-218ENST00000555628 GCGRP47871 477 aa11□□□□□ -0.65
PRKCH-218ENST00000555628 ATP8B2P98198 1209 aa11□□□□□ -0.65
PRKCH-218ENST00000555628 ACVR2BQ13705 512 aa11□□□□□ -0.65
PRKCH-218ENST00000555628 CCDC144BQ3MJ40 725 aa11□□□□□ -0.65
PRKCH-218ENST00000555628 OTOP2Q7RTS6 562 aa11□□□□□ -0.65
PRKCH-218ENST00000555628 PCSK9Q8NBP7 692 aaKnown RBP11□□□□□ -0.65
PRKCH-218ENST00000555628 AGBL1Q96MI9 1066 aa11□□□□□ -0.65
PRKCH-218ENST00000555628 TEX13BQ9BXU2 312 aa11□□□□□ -0.65
PRKCH-218ENST00000555628 ARHGEF10LQ9HCE6 1279 aa11□□□□□ -0.65
PRKCH-218ENST00000555628 CD320Q9NPF0 282 aa11□□□□□ -0.65
PRKCH-218ENST00000555628 HCN4Q9Y3Q4 1203 aa11□□□□□ -0.65
PRKCH-218ENST00000555628 SCN5AQ14524 2016 aa11□□□□□ -0.65
PRKCH-218ENST00000555628 ZBED9Q6R2W3 1325 aa11□□□□□ -0.65
PRKCH-218ENST00000555628 FGBP02675 491 aa10.99□□□□□ -0.65
PRKCH-218ENST00000555628 AAK1Q2M2I8 961 aa10.99□□□□□ -0.65
PRKCH-218ENST00000555628 TMEM31Q5JXX7 168 aa10.99□□□□□ -0.65
PRKCH-218ENST00000555628 FAM83BQ5T0W9 1011 aa10.99□□□□□ -0.65
PRKCH-218ENST00000555628 PPP2R2DQ66LE6 453 aa10.99□□□□□ -0.65
PRKCH-218ENST00000555628 KRT40Q6A162 431 aa10.99□□□□□ -0.65
PRKCH-218ENST00000555628 C16orf86Q6ZW13 317 aa10.99□□□□□ -0.65
PRKCH-218ENST00000555628 IL27Q8NEV9 243 aa10.99□□□□□ -0.65
PRKCH-218ENST00000555628 CRNKL1Q9BZJ0 848 aaKnown RBP10.99□□□□□ -0.65
PRKCH-218ENST00000555628 HIPK3Q9H422 1215 aa10.99□□□□□ -0.65
PRKCH-218ENST00000555628 SH2D4AQ9H788 454 aa10.99□□□□□ -0.65
PRKCH-218ENST00000555628 ZHX1Q9UKY1 873 aaPredicted RBP10.99□□□□□ -0.65
PRKCH-218ENST00000555628 GNEQ9Y223 722 aaKnown RBP10.99□□□□□ -0.65
PRKCH-218ENST00000555628 C5orf42Q9H799 3197 aa10.99□□□□□ -0.65
PRKCH-218ENST00000555628 CYP2D7A0A087X1C5 515 aa10.98□□□□□ -0.65
PRKCH-218ENST00000555628 C11orf97A0A1B0GVM6 126 aaPredicted RBP10.98□□□□□ -0.65
PRKCH-218ENST00000555628 RFXAPO00287 272 aa10.98□□□□□ -0.65
PRKCH-218ENST00000555628 PRKAB2O43741 272 aa10.98□□□□□ -0.65
PRKCH-218ENST00000555628 B4GALT4O60513 344 aa10.98□□□□□ -0.65
PRKCH-218ENST00000555628 LPXNO60711 386 aa10.98□□□□□ -0.65
PRKCH-218ENST00000555628 SURF6O75683 361 aaKnown RBP10.98□□□□□ -0.65
PRKCH-218ENST00000555628 BCAR3O75815 825 aa10.98□□□□□ -0.65
PRKCH-218ENST00000555628 PTGS1P23219 599 aa10.98□□□□□ -0.65
PRKCH-218ENST00000555628 CDK8P49336 464 aa10.98□□□□□ -0.65
PRKCH-218ENST00000555628 FUT2Q10981 343 aa10.98□□□□□ -0.65
PRKCH-218ENST00000555628 C12orf60Q5U649 245 aa10.98□□□□□ -0.65
PRKCH-218ENST00000555628 TET1Q8NFU7 2136 aa10.98□□□□□ -0.65
PRKCH-218ENST00000555628 CCDC17Q96LX7 622 aa10.98□□□□□ -0.65
PRKCH-218ENST00000555628 ABHD16BQ9H3Z7 469 aa10.98□□□□□ -0.65
PRKCH-218ENST00000555628 ZNF532Q9HCE3 1301 aa10.98□□□□□ -0.65
PRKCH-218ENST00000555628 SCN10AQ9Y5Y9 1956 aa10.97□□□□□ -0.65
PRKCH-218ENST00000555628 FAM86C2PA6NEL3 165 aa10.97□□□□□ -0.65
PRKCH-218ENST00000555628 PI4K2BG5E9Z4 385 aa10.97□□□□□ -0.65
PRKCH-218ENST00000555628 TLR3O15455 904 aaKnown RBP10.97□□□□□ -0.65
PRKCH-218ENST00000555628 CA3P07451 260 aa10.97□□□□□ -0.65
PRKCH-218ENST00000555628 CD46P15529 392 aa10.97□□□□□ -0.65
PRKCH-218ENST00000555628 BEX3Q00994 111 aa10.97□□□□□ -0.65
PRKCH-218ENST00000555628 TTLL4Q14679 1199 aa10.97□□□□□ -0.65
PRKCH-218ENST00000555628 SLFNL1Q499Z3 407 aa10.97□□□□□ -0.65
PRKCH-218ENST00000555628 GNASQ5JWF2 1037 aa10.97□□□□□ -0.65
PRKCH-218ENST00000555628 SLC9C2Q5TAH2 1124 aa10.97□□□□□ -0.65
PRKCH-218ENST00000555628 SNRNP48Q6IEG0 339 aaKnown RBP10.97□□□□□ -0.65
PRKCH-218ENST00000555628 PPP1R18Q6NYC8 613 aa10.97□□□□□ -0.65
PRKCH-218ENST00000555628 CXCL17Q6UXB2 119 aa10.97□□□□□ -0.65
PRKCH-218ENST00000555628 ARMCX2Q7L311 632 aa10.97□□□□□ -0.65
PRKCH-218ENST00000555628 SPRED2Q7Z698 418 aa10.97□□□□□ -0.65
PRKCH-218ENST00000555628 SCUBE3Q8IX30 993 aa10.97□□□□□ -0.65
PRKCH-218ENST00000555628 TMEM57Q8N5G2 664 aa10.97□□□□□ -0.65
PRKCH-218ENST00000555628 NUP88Q99567 741 aaPredicted RBP10.97□□□□□ -0.65
PRKCH-218ENST00000555628 TRPV6Q9H1D0 765 aa10.97□□□□□ -0.65
PRKCH-218ENST00000555628 MTIF3Q9H2K0 278 aaKnown RBP10.97□□□□□ -0.65
PRKCH-218ENST00000555628 KANSL2Q9H9L4 492 aa10.97□□□□□ -0.65
PRKCH-218ENST00000555628 COG5Q9UP83 839 aa10.97□□□□□ -0.65
PRKCH-218ENST00000555628 SLC4A7Q9Y6M7 1214 aa10.97□□□□□ -0.65
PRKCH-218ENST00000555628 MYH7P12883 1935 aa10.97□□□□□ -0.65
PRKCH-218ENST00000555628 MYH4Q9Y623 1939 aa10.96□□□□□ -0.65
PRKCH-218ENST00000555628 ATP2A2P16615 1042 aaKnown RBP10.96□□□□□ -0.65
PRKCH-218ENST00000555628 CCL23P55773 120 aa10.96□□□□□ -0.65
PRKCH-218ENST00000555628 TAP1Q03518 808 aa10.96□□□□□ -0.65
PRKCH-218ENST00000555628 CCDC144CPQ8IYA2 1237 aa10.96□□□□□ -0.65
PRKCH-218ENST00000555628 MICALL1Q8N3F8 863 aa10.96□□□□□ -0.65
PRKCH-218ENST00000555628 FAM133AQ8N9E0 248 aa10.96□□□□□ -0.65
PRKCH-218ENST00000555628 SLF1Q9BQI6 1058 aa10.96□□□□□ -0.65
PRKCH-218ENST00000555628 C1orf115Q9H7X2 142 aa10.96□□□□□ -0.65
PRKCH-218ENST00000555628 ARMT1Q9H993 441 aa10.96□□□□□ -0.65
PRKCH-218ENST00000555628 SLC38A10Q9HBR0 1119 aa10.96□□□□□ -0.65
PRKCH-218ENST00000555628 ATP8A2Q9NTI2 1148 aa10.96□□□□□ -0.65
PRKCH-218ENST00000555628 IGKV6D-41A0A0C4DH26 115 aa10.95□□□□□ -0.66
PRKCH-218ENST00000555628 APBB1O00213 710 aa10.95□□□□□ -0.66
PRKCH-218ENST00000555628 CABYRO75952 493 aa10.95□□□□□ -0.66
PRKCH-218ENST00000555628 NDUFB10O96000 172 aa10.95□□□□□ -0.66
PRKCH-218ENST00000555628 CHGBP05060 677 aa10.95□□□□□ -0.66
PRKCH-218ENST00000555628 OS9Q13438 667 aaPredicted RBP10.95□□□□□ -0.66
PRKCH-218ENST00000555628 ITGA7Q13683 1181 aa10.95□□□□□ -0.66
PRKCH-218ENST00000555628 TMEM63BQ5T3F8 832 aa10.95□□□□□ -0.66
PRKCH-218ENST00000555628 PPIL4Q8WUA2 492 aaKnown RBP eCLIP10.95□□□□□ -0.66
PRKCH-218ENST00000555628 CLUAP1Q96AJ1 413 aa10.95□□□□□ -0.66
PRKCH-218ENST00000555628 SCLYQ96I15 445 aa10.95□□□□□ -0.66
PRKCH-218ENST00000555628 GOPCQ9HD26 462 aa10.95□□□□□ -0.66
PRKCH-218ENST00000555628 GPCPD1Q9NPB8 672 aa10.95□□□□□ -0.66
PRKCH-218ENST00000555628 FAM217BQ9NTX9 383 aaPredicted RBP10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms