RNA–Protein interactions for RNA: ENST00000555497.5

TMEM260-207, Transcript of transmembrane protein 260, humanhuman

TSL 2

Gene TMEM260, Length 2,218 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-207ENST00000555497 TRIM34Q9BYJ4 488 aa27.29■■□□□ 1.96
TMEM260-207ENST00000555497 LRWD1Q9UFC0 647 aa27.29■■□□□ 1.96
TMEM260-207ENST00000555497 TOGARAM2Q6ZUX3 1019 aa27.28■■□□□ 1.96
TMEM260-207ENST00000555497 DCAF4Q8WV16 495 aa27.28■■□□□ 1.96
TMEM260-207ENST00000555497 BLOC1S4Q9NUP1 217 aa27.28■■□□□ 1.96
TMEM260-207ENST00000555497 PPP2R2CQ9Y2T4 447 aa27.28■■□□□ 1.96
TMEM260-207ENST00000555497 POTEMA6NI47 508 aa27.28■■□□□ 1.96
TMEM260-207ENST00000555497 MRPL12P52815 198 aaKnown RBP27.28■■□□□ 1.96
TMEM260-207ENST00000555497 ICA1Q05084 483 aa27.28■■□□□ 1.96
TMEM260-207ENST00000555497 TRIM65Q6PJ69 517 aa27.28■■□□□ 1.96
TMEM260-207ENST00000555497 NUDT12Q9BQG2 462 aa27.28■■□□□ 1.96
TMEM260-207ENST00000555497 ATF5Q9Y2D1 282 aaPredicted RBP27.28■■□□□ 1.96
TMEM260-207ENST00000555497 H7C1D1 291 aa27.27■■□□□ 1.96
TMEM260-207ENST00000555497 N4BP3O15049 544 aa27.27■■□□□ 1.96
TMEM260-207ENST00000555497 PPP4R3AQ6IN85 833 aa27.27■■□□□ 1.96
TMEM260-207ENST00000555497 TMEM179Q6ZVK1 233 aa27.27■■□□□ 1.96
TMEM260-207ENST00000555497 GJA10Q969M2 543 aa27.27■■□□□ 1.96
TMEM260-207ENST00000555497 PKNOX2Q96KN3 472 aa27.27■■□□□ 1.96
TMEM260-207ENST00000555497 USP17L15C9J2P7 530 aa27.26■■□□□ 1.96
TMEM260-207ENST00000555497 USP17L13C9JLJ4 530 aa27.26■■□□□ 1.96
TMEM260-207ENST00000555497 USP17L11C9JVI0 530 aa27.26■■□□□ 1.96
TMEM260-207ENST00000555497 USP17L18D6R9N7 530 aa27.26■■□□□ 1.96
TMEM260-207ENST00000555497 USP17L22D6RA61 530 aa27.26■■□□□ 1.96
TMEM260-207ENST00000555497 USP17L17D6RBQ6 530 aa27.26■■□□□ 1.96
TMEM260-207ENST00000555497 USP17L19D6RCP7 530 aa27.26■■□□□ 1.96
TMEM260-207ENST00000555497 USP17L20D6RJB6 530 aa27.26■■□□□ 1.96
TMEM260-207ENST00000555497 USP17L24Q0WX57 530 aa27.26■■□□□ 1.96
TMEM260-207ENST00000555497 ABCB5Q2M3G0 1257 aa27.26■■□□□ 1.96
TMEM260-207ENST00000555497 USP17L6PQ6QN14 398 aa27.26■■□□□ 1.96
TMEM260-207ENST00000555497 CREBRFQ8IUR6 639 aa27.26■■□□□ 1.96
TMEM260-207ENST00000555497 HAS1Q92839 578 aa27.26■■□□□ 1.96
TMEM260-207ENST00000555497 CALML4Q96GE6 196 aa27.26■■□□□ 1.96
TMEM260-207ENST00000555497 PANX2Q96RD6 677 aa27.26■■□□□ 1.96
TMEM260-207ENST00000555497 NUP88Q99567 741 aaPredicted RBP27.26■■□□□ 1.96
TMEM260-207ENST00000555497 ATRNL1Q5VV63 1379 aa27.26■■□□□ 1.96
TMEM260-207ENST00000555497 CCP110O43303 1012 aa27.26■■□□□ 1.95
TMEM260-207ENST00000555497 GYPCP04921 128 aa27.26■■□□□ 1.95
TMEM260-207ENST00000555497 SNAP25P60880 206 aa27.26■■□□□ 1.95
TMEM260-207ENST00000555497 ASIC1P78348 528 aa27.26■■□□□ 1.95
TMEM260-207ENST00000555497 MTF1Q14872 753 aa27.26■■□□□ 1.95
TMEM260-207ENST00000555497 CC2D2BQ6DHV5 1058 aa27.26■■□□□ 1.95
TMEM260-207ENST00000555497 POTEAQ6S8J7 498 aa27.26■■□□□ 1.95
TMEM260-207ENST00000555497 PPFIBP1Q86W92 1011 aa27.26■■□□□ 1.95
TMEM260-207ENST00000555497 ARFGEF1Q9Y6D6 1849 aa27.26■■□□□ 1.95
TMEM260-207ENST00000555497 F5H6K3 240 aa27.25■■□□□ 1.95
TMEM260-207ENST00000555497 FANCGO15287 622 aa27.25■■□□□ 1.95
TMEM260-207ENST00000555497 ENTPD3O75355 529 aa27.25■■□□□ 1.95
TMEM260-207ENST00000555497 KLRC3Q07444 240 aa27.25■■□□□ 1.95
TMEM260-207ENST00000555497 SPAG1Q07617 926 aa27.25■■□□□ 1.95
TMEM260-207ENST00000555497 PDE4DQ08499 809 aa27.25■■□□□ 1.95
TMEM260-207ENST00000555497 NCBP1Q09161 790 aaKnown RBP27.25■■□□□ 1.95
TMEM260-207ENST00000555497 STK4Q13043 487 aa27.25■■□□□ 1.95
TMEM260-207ENST00000555497 CDC37Q16543 378 aaPredicted RBP27.25■■□□□ 1.95
TMEM260-207ENST00000555497 TTI2Q6NXR4 508 aa27.25■■□□□ 1.95
TMEM260-207ENST00000555497 SUPT20HQ8NEM7 779 aa27.25■■□□□ 1.95
TMEM260-207ENST00000555497 PCDHA1Q9Y5I3 950 aa27.25■■□□□ 1.95
TMEM260-207ENST00000555497 FCER1AP12319 257 aa27.25■■□□□ 1.95
TMEM260-207ENST00000555497 CASP14P31944 242 aa27.25■■□□□ 1.95
TMEM260-207ENST00000555497 FXR1P51114 621 aaKnown RBP eCLIP27.25■■□□□ 1.95
TMEM260-207ENST00000555497 ETF1P62495 437 aaKnown RBP27.25■■□□□ 1.95
TMEM260-207ENST00000555497 SEMA3FQ13275 785 aa27.25■■□□□ 1.95
TMEM260-207ENST00000555497 PDIA5Q14554 519 aa27.25■■□□□ 1.95
TMEM260-207ENST00000555497 ANKRD7Q92527 254 aa27.25■■□□□ 1.95
TMEM260-207ENST00000555497 DDX25Q9UHL0 483 aaKnown RBP27.25■■□□□ 1.95
TMEM260-207ENST00000555497 MCM6Q14566 821 aa27.24■■□□□ 1.95
TMEM260-207ENST00000555497 TMEM266Q2M3C6 531 aa27.24■■□□□ 1.95
TMEM260-207ENST00000555497 HPS3Q969F9 1004 aa27.24■■□□□ 1.95
TMEM260-207ENST00000555497 DUSP9Q99956 384 aaKnown RBP27.24■■□□□ 1.95
TMEM260-207ENST00000555497 ITIH6Q6UXX5 1313 aa27.24■■□□□ 1.95
TMEM260-207ENST00000555497 RNF225M0QZC1 329 aaPredicted RBP27.24■■□□□ 1.95
TMEM260-207ENST00000555497 MFAP3LO75121 409 aa27.24■■□□□ 1.95
TMEM260-207ENST00000555497 GH2P01242 217 aa27.24■■□□□ 1.95
TMEM260-207ENST00000555497 MAP7D2Q96T17 732 aa27.24■■□□□ 1.95
TMEM260-207ENST00000555497 SRRTQ9BXP5 876 aaKnown RBP27.24■■□□□ 1.95
TMEM260-207ENST00000555497 EXOC1Q9NV70 894 aa27.24■■□□□ 1.95
TMEM260-207ENST00000555497 PSME4Q14997 1843 aa27.24■■□□□ 1.95
TMEM260-207ENST00000555497 MYMKA6NI61 221 aa27.23■■□□□ 1.95
TMEM260-207ENST00000555497 SOWAHDA6NJG2 315 aa27.23■■□□□ 1.95
TMEM260-207ENST00000555497 PSMA7O14818 248 aa27.23■■□□□ 1.95
TMEM260-207ENST00000555497 NDUFB10O96000 172 aa27.23■■□□□ 1.95
TMEM260-207ENST00000555497 KCNK18Q7Z418 384 aa27.23■■□□□ 1.95
TMEM260-207ENST00000555497 DESI2Q9BSY9 194 aa27.23■■□□□ 1.95
TMEM260-207ENST00000555497 ZNF215Q9UL58 517 aaPredicted RBP27.23■■□□□ 1.95
TMEM260-207ENST00000555497 ZSCAN12O43309 604 aa27.22■■□□□ 1.95
TMEM260-207ENST00000555497 STIM1Q13586 685 aa27.22■■□□□ 1.95
TMEM260-207ENST00000555497 ECM1Q16610 540 aa27.22■■□□□ 1.95
TMEM260-207ENST00000555497 SV2BQ7L1I2 683 aa27.22■■□□□ 1.95
TMEM260-207ENST00000555497 DHTKD1Q96HY7 919 aaPredicted RBP27.22■■□□□ 1.95
TMEM260-207ENST00000555497 UIMC1Q96RL1 719 aa27.22■■□□□ 1.95
TMEM260-207ENST00000555497 CSRNP1Q96S65 589 aa27.22■■□□□ 1.95
TMEM260-207ENST00000555497 P2RX7Q99572 595 aaKnown RBP27.22■■□□□ 1.95
TMEM260-207ENST00000555497 DNAI1Q9UI46 699 aa27.22■■□□□ 1.95
TMEM260-207ENST00000555497 COL4A5P29400 1685 aa27.21■■□□□ 1.95
TMEM260-207ENST00000555497 AMPD3Q01432 767 aa27.21■■□□□ 1.95
TMEM260-207ENST00000555497 RAD9BQ6WBX8 426 aa27.21■■□□□ 1.95
TMEM260-207ENST00000555497 GMCL1P1Q8NEA9 526 aa27.21■■□□□ 1.95
TMEM260-207ENST00000555497 SNX29Q8TEQ0 813 aa27.21■■□□□ 1.95
TMEM260-207ENST00000555497 TRIM47Q96LD4 638 aa27.21■■□□□ 1.95
TMEM260-207ENST00000555497 STK17AQ9UEE5 414 aa27.21■■□□□ 1.95
TMEM260-207ENST00000555497 A0A1W2PRG0 241 aa27.21■■□□□ 1.95
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms