RNA–Protein interactions for RNA: ENST00000555046.1

TMEM260-206, Transcript of transmembrane protein 260, humanhuman

TSL 3

Gene TMEM260, Length 618 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-206ENST00000555046 ASB14A6NK59 587 aa12.25□□□□□ -0.45
TMEM260-206ENST00000555046 COBLO75128 1261 aa12.25□□□□□ -0.45
TMEM260-206ENST00000555046 CPA1P15085 419 aa12.25□□□□□ -0.45
TMEM260-206ENST00000555046 NEK4P51957 841 aa12.25□□□□□ -0.45
TMEM260-206ENST00000555046 APOBRQ0VD83 1088 aa12.25□□□□□ -0.45
TMEM260-206ENST00000555046 ZNF792Q3KQV3 632 aa12.25□□□□□ -0.45
TMEM260-206ENST00000555046 NSMFQ6X4W1 530 aa12.25□□□□□ -0.45
TMEM260-206ENST00000555046 RNF207Q6ZRF8 634 aa12.25□□□□□ -0.45
TMEM260-206ENST00000555046 TMTC3Q6ZXV5 915 aa12.25□□□□□ -0.45
TMEM260-206ENST00000555046 RASGRP2Q7LDG7 609 aa12.25□□□□□ -0.45
TMEM260-206ENST00000555046 MYL10Q9BUA6 226 aa12.25□□□□□ -0.45
TMEM260-206ENST00000555046 UPF3BQ9BZI7 483 aaKnown RBP12.25□□□□□ -0.45
TMEM260-206ENST00000555046 HMX1Q9NP08 348 aaPredicted RBP12.25□□□□□ -0.45
TMEM260-206ENST00000555046 PTPRFP10586 1907 aa12.25□□□□□ -0.45
TMEM260-206ENST00000555046 DNAJC25-GNG10A0A024R161 153 aa12.24□□□□□ -0.45
TMEM260-206ENST00000555046 PTPDC1A2A3K4 754 aa12.24□□□□□ -0.45
TMEM260-206ENST00000555046 TNFRSF10AO00220 468 aa12.24□□□□□ -0.45
TMEM260-206ENST00000555046 CPLX1O14810 134 aa12.24□□□□□ -0.45
TMEM260-206ENST00000555046 MSCO60682 206 aa12.24□□□□□ -0.45
TMEM260-206ENST00000555046 INHAP05111 366 aa12.24□□□□□ -0.45
TMEM260-206ENST00000555046 ELNP15502 786 aa12.24□□□□□ -0.45
TMEM260-206ENST00000555046 PDIA3P30101 505 aaKnown RBP12.24□□□□□ -0.45
TMEM260-206ENST00000555046 RBM25P49756 843 aaKnown RBP12.24□□□□□ -0.45
TMEM260-206ENST00000555046 USH1GQ495M9 461 aa12.24□□□□□ -0.45
TMEM260-206ENST00000555046 HOMER1Q86YM7 354 aa12.24□□□□□ -0.45
TMEM260-206ENST00000555046 CCDC144CPQ8IYA2 1237 aa12.24□□□□□ -0.45
TMEM260-206ENST00000555046 SRBD1Q8N5C6 995 aaKnown RBP12.24□□□□□ -0.45
TMEM260-206ENST00000555046 MAML3Q96JK9 1138 aa12.24□□□□□ -0.45
TMEM260-206ENST00000555046 PIGSQ96S52 555 aa12.24□□□□□ -0.45
TMEM260-206ENST00000555046 GDF15Q99988 308 aa12.24□□□□□ -0.45
TMEM260-206ENST00000555046 RNF208Q9H0X6 261 aa12.24□□□□□ -0.45
TMEM260-206ENST00000555046 GLT8D2Q9H1C3 349 aa12.24□□□□□ -0.45
TMEM260-206ENST00000555046 CPVLQ9H3G5 476 aa12.24□□□□□ -0.45
TMEM260-206ENST00000555046 A1CFQ9NQ94 594 aaKnown RBP12.24□□□□□ -0.45
TMEM260-206ENST00000555046 CYP39A1Q9NYL5 469 aa12.24□□□□□ -0.45
TMEM260-206ENST00000555046 CNPY2Q9Y2B0 182 aa12.24□□□□□ -0.45
TMEM260-206ENST00000555046 hCG_1984214I3L0E3 225 aa12.23□□□□□ -0.45
TMEM260-206ENST00000555046 CYTH3O43739 400 aa12.23□□□□□ -0.45
TMEM260-206ENST00000555046 CDKL5O76039 1030 aa12.23□□□□□ -0.45
TMEM260-206ENST00000555046 PGK2P07205 417 aa12.23□□□□□ -0.45
TMEM260-206ENST00000555046 RXRAP19793 462 aa12.23□□□□□ -0.45
TMEM260-206ENST00000555046 BMP8BP34820 402 aa12.23□□□□□ -0.45
TMEM260-206ENST00000555046 BAATQ14032 418 aaPredicted RBP12.23□□□□□ -0.45
TMEM260-206ENST00000555046 MUM1L1Q5H9M0 696 aa12.23□□□□□ -0.45
TMEM260-206ENST00000555046 MAMDC4Q6UXC1 1216 aa12.23□□□□□ -0.45
TMEM260-206ENST00000555046 TRIM22Q8IYM9 498 aa12.23□□□□□ -0.45
TMEM260-206ENST00000555046 CCDC82Q8N4S0 544 aa12.23□□□□□ -0.45
TMEM260-206ENST00000555046 ZNF713Q8N859 430 aaPredicted RBP12.23□□□□□ -0.45
TMEM260-206ENST00000555046 DNERQ8NFT8 737 aa12.23□□□□□ -0.45
TMEM260-206ENST00000555046 NPLOC4Q8TAT6 608 aa12.23□□□□□ -0.45
TMEM260-206ENST00000555046 CLEC4DQ8WXI8 215 aa12.23□□□□□ -0.45
TMEM260-206ENST00000555046 TRIB2Q92519 343 aa12.23□□□□□ -0.45
TMEM260-206ENST00000555046 CUL5Q93034 780 aa12.23□□□□□ -0.45
TMEM260-206ENST00000555046 TINF2Q9BSI4 451 aa12.23□□□□□ -0.45
TMEM260-206ENST00000555046 SLKQ9H2G2 1235 aaPredicted RBP12.23□□□□□ -0.45
TMEM260-206ENST00000555046 V9GY48 417 aaPredicted RBP12.23□□□□□ -0.45
TMEM260-206ENST00000555046 GCOM1H8Y6P7 765 aaPredicted RBP12.22□□□□□ -0.45
TMEM260-206ENST00000555046 ST18O60284 1047 aa12.22□□□□□ -0.45
TMEM260-206ENST00000555046 GJB1P08034 283 aa12.22□□□□□ -0.45
TMEM260-206ENST00000555046 POLR2MP0CAP2 368 aa12.22□□□□□ -0.45
TMEM260-206ENST00000555046 CCL5P13501 91 aa12.22□□□□□ -0.45
TMEM260-206ENST00000555046 PRKAR2AP13861 404 aaKnown RBP12.22□□□□□ -0.45
TMEM260-206ENST00000555046 ADD1P35611 737 aaKnown RBP12.22□□□□□ -0.45
TMEM260-206ENST00000555046 COL9A3Q14050 684 aaPredicted RBP12.22□□□□□ -0.45
TMEM260-206ENST00000555046 TOB2Q14106 344 aaPredicted RBP12.22□□□□□ -0.45
TMEM260-206ENST00000555046 RABEP1Q15276 862 aa12.22□□□□□ -0.45
TMEM260-206ENST00000555046 MTFR1Q15390 333 aa12.22□□□□□ -0.45
TMEM260-206ENST00000555046 MAP3K21Q5TCX8 1036 aa12.22□□□□□ -0.45
TMEM260-206ENST00000555046 FAM133AQ8N9E0 248 aa12.22□□□□□ -0.45
TMEM260-206ENST00000555046 NSUN6Q8TEA1 469 aaKnown RBP12.22□□□□□ -0.45
TMEM260-206ENST00000555046 CCDC12Q8WUD4 166 aaPredicted RBP12.22□□□□□ -0.45
TMEM260-206ENST00000555046 SYMPKQ92797 1274 aaKnown RBP12.22□□□□□ -0.45
TMEM260-206ENST00000555046 BACH2Q9BYV9 841 aa12.22□□□□□ -0.45
TMEM260-206ENST00000555046 ABHD16BQ9H3Z7 469 aa12.22□□□□□ -0.45
TMEM260-206ENST00000555046 LAMA4Q16363 1823 aa12.21□□□□□ -0.45
TMEM260-206ENST00000555046 NFIBO00712 420 aa12.21□□□□□ -0.45
TMEM260-206ENST00000555046 PRPF3O43395 683 aaKnown RBP12.21□□□□□ -0.45
TMEM260-206ENST00000555046 PLEKHA8P1O95397 391 aa12.21□□□□□ -0.45
TMEM260-206ENST00000555046 IFNAR1P17181 557 aa12.21□□□□□ -0.45
TMEM260-206ENST00000555046 CALML3P27482 149 aa12.21□□□□□ -0.45
TMEM260-206ENST00000555046 RPS6P62753 249 aaKnown RBP12.21□□□□□ -0.45
TMEM260-206ENST00000555046 CACNB2Q08289 660 aaPredicted RBP12.21□□□□□ -0.45
TMEM260-206ENST00000555046 CCL14Q16627 93 aa12.21□□□□□ -0.45
TMEM260-206ENST00000555046 RAB11FIP4Q86YS3 637 aa12.21□□□□□ -0.45
TMEM260-206ENST00000555046 PIBF1Q8WXW3 757 aa12.21□□□□□ -0.45
TMEM260-206ENST00000555046 ZSCAN31Q96LW9 406 aaPredicted RBP12.21□□□□□ -0.45
TMEM260-206ENST00000555046 IWS1Q96ST2 819 aa12.21□□□□□ -0.45
TMEM260-206ENST00000555046 PSTPIP2Q9H939 334 aa12.21□□□□□ -0.45
TMEM260-206ENST00000555046 EVI5O60447 810 aa12.2□□□□□ -0.46
TMEM260-206ENST00000555046 CFBP00751 764 aa12.2□□□□□ -0.46
TMEM260-206ENST00000555046 IGHA2P01877 340 aa12.2□□□□□ -0.46
TMEM260-206ENST00000555046 TFRCP02786 760 aaKnown RBP12.2□□□□□ -0.46
TMEM260-206ENST00000555046 CNGA1P29973 690 aa12.2□□□□□ -0.46
TMEM260-206ENST00000555046 CDC27P30260 824 aa12.2□□□□□ -0.46
TMEM260-206ENST00000555046 CYP2C19P33261 490 aa12.2□□□□□ -0.46
TMEM260-206ENST00000555046 MCM2P49736 904 aa12.2□□□□□ -0.46
TMEM260-206ENST00000555046 AK2P54819 239 aa12.2□□□□□ -0.46
TMEM260-206ENST00000555046 SSRP1Q08945 709 aaKnown RBP12.2□□□□□ -0.46
TMEM260-206ENST00000555046 ARHGEF16Q5VV41 709 aa12.2□□□□□ -0.46
TMEM260-206ENST00000555046 MCTP2Q6DN12 878 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms