RNA–Protein interactions for RNA: ENST00000554997.1

SYNE2-215, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 2

Gene SYNE2, Length 711 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-215ENST00000554997 RNF207Q6ZRF8 634 aa11.71□□□□□ -0.53
SYNE2-215ENST00000554997 GPR142Q7Z601 462 aa11.71□□□□□ -0.53
SYNE2-215ENST00000554997 DAGLBQ8NCG7 672 aa11.71□□□□□ -0.53
SYNE2-215ENST00000554997 CUL5Q93034 780 aa11.71□□□□□ -0.53
SYNE2-215ENST00000554997 MMP19Q99542 508 aa11.71□□□□□ -0.53
SYNE2-215ENST00000554997 CYP39A1Q9NYL5 469 aa11.71□□□□□ -0.53
SYNE2-215ENST00000554997 PCDHA4Q9UN74 947 aa11.71□□□□□ -0.53
SYNE2-215ENST00000554997 KCNJ14Q9UNX9 436 aa11.71□□□□□ -0.53
SYNE2-215ENST00000554997 PFASO15067 1338 aa11.7□□□□□ -0.54
SYNE2-215ENST00000554997 M0R2N6 131 aa11.7□□□□□ -0.54
SYNE2-215ENST00000554997 FOSP01100 380 aaPredicted RBP11.7□□□□□ -0.54
SYNE2-215ENST00000554997 GNRH1P01148 92 aa11.7□□□□□ -0.54
SYNE2-215ENST00000554997 SYT1P21579 422 aa11.7□□□□□ -0.54
SYNE2-215ENST00000554997 PSMC4P43686 418 aa11.7□□□□□ -0.54
SYNE2-215ENST00000554997 CLK2P49760 499 aaKnown RBP11.7□□□□□ -0.54
SYNE2-215ENST00000554997 RPS6P62753 249 aaKnown RBP11.7□□□□□ -0.54
SYNE2-215ENST00000554997 C1QBPQ07021 282 aaKnown RBP11.7□□□□□ -0.54
SYNE2-215ENST00000554997 ARHGEF6Q15052 776 aa11.7□□□□□ -0.54
SYNE2-215ENST00000554997 SAFBQ15424 915 aaKnown RBP eCLIP11.7□□□□□ -0.54
SYNE2-215ENST00000554997 NPY5RQ15761 445 aa11.7□□□□□ -0.54
SYNE2-215ENST00000554997 WDR78Q5VTH9 848 aa11.7□□□□□ -0.54
SYNE2-215ENST00000554997 USP17L6PQ6QN14 398 aa11.7□□□□□ -0.54
SYNE2-215ENST00000554997 NSMFQ6X4W1 530 aa11.7□□□□□ -0.54
SYNE2-215ENST00000554997 BLIDQ8IZY5 108 aa11.7□□□□□ -0.54
SYNE2-215ENST00000554997 ZNF296Q8WUU4 475 aaPredicted RBP11.7□□□□□ -0.54
SYNE2-215ENST00000554997 ERO1AQ96HE7 468 aa11.7□□□□□ -0.54
SYNE2-215ENST00000554997 A1CFQ9NQ94 594 aaKnown RBP11.7□□□□□ -0.54
SYNE2-215ENST00000554997 GJD2Q9UKL4 321 aa11.7□□□□□ -0.54
SYNE2-215ENST00000554997 IVNS1ABPQ9Y6Y0 642 aa11.7□□□□□ -0.54
SYNE2-215ENST00000554997 DNAJC25-GNG10A0A024R161 153 aa11.69□□□□□ -0.54
SYNE2-215ENST00000554997 BTBD18B2RXH4 712 aa11.69□□□□□ -0.54
SYNE2-215ENST00000554997 H3BQV1 296 aa11.69□□□□□ -0.54
SYNE2-215ENST00000554997 TNPO2O14787 897 aaKnown RBP11.69□□□□□ -0.54
SYNE2-215ENST00000554997 CTGFP29279 349 aa11.69□□□□□ -0.54
SYNE2-215ENST00000554997 HOXA13P31271 388 aaPredicted RBP11.69□□□□□ -0.54
SYNE2-215ENST00000554997 GRB14Q14449 540 aa11.69□□□□□ -0.54
SYNE2-215ENST00000554997 MORN1Q5T089 497 aa11.69□□□□□ -0.54
SYNE2-215ENST00000554997 IFFO2Q5TF58 517 aa11.69□□□□□ -0.54
SYNE2-215ENST00000554997 SYTL5Q8TDW5 730 aaPredicted RBP11.69□□□□□ -0.54
SYNE2-215ENST00000554997 USP6NLQ92738 828 aa11.69□□□□□ -0.54
SYNE2-215ENST00000554997 TRIM47Q96LD4 638 aa11.69□□□□□ -0.54
SYNE2-215ENST00000554997 BRMS1Q9HCU9 246 aa11.69□□□□□ -0.54
SYNE2-215ENST00000554997 SLC5A4Q9NY91 659 aa11.69□□□□□ -0.54
SYNE2-215ENST00000554997 BIN2Q9UBW5 565 aaPredicted RBP11.69□□□□□ -0.54
SYNE2-215ENST00000554997 PCDHA6Q9UN73 950 aa11.69□□□□□ -0.54
SYNE2-215ENST00000554997 PCDHA8Q9Y5H6 950 aa11.69□□□□□ -0.54
SYNE2-215ENST00000554997 PARP14Q460N5 1801 aa11.68□□□□□ -0.54
SYNE2-215ENST00000554997 POTEB2H3BUK9 544 aa11.68□□□□□ -0.54
SYNE2-215ENST00000554997 ADAMTS3O15072 1205 aa11.68□□□□□ -0.54
SYNE2-215ENST00000554997 STX6O43752 255 aa11.68□□□□□ -0.54
SYNE2-215ENST00000554997 U2AF2P26368 475 aaKnown RBP eCLIP11.68□□□□□ -0.54
SYNE2-215ENST00000554997 HOXD10P28358 340 aa11.68□□□□□ -0.54
SYNE2-215ENST00000554997 ADORA2AP29274 412 aa11.68□□□□□ -0.54
SYNE2-215ENST00000554997 DDIT3P35638 169 aa11.68□□□□□ -0.54
SYNE2-215ENST00000554997 KRT2P35908 639 aa11.68□□□□□ -0.54
SYNE2-215ENST00000554997 FOSBP53539 338 aa11.68□□□□□ -0.54
SYNE2-215ENST00000554997 GUCY1B3Q02153 619 aa11.68□□□□□ -0.54
SYNE2-215ENST00000554997 MAP2K5Q13163 448 aa11.68□□□□□ -0.54
SYNE2-215ENST00000554997 DPP9Q86TI2 863 aa11.68□□□□□ -0.54
SYNE2-215ENST00000554997 DIS3L2Q8IYB7 885 aaKnown RBP11.68□□□□□ -0.54
SYNE2-215ENST00000554997 REXO1Q8N1G1 1221 aaKnown RBP11.68□□□□□ -0.54
SYNE2-215ENST00000554997 FAM133AQ8N9E0 248 aa11.68□□□□□ -0.54
SYNE2-215ENST00000554997 DNERQ8NFT8 737 aa11.68□□□□□ -0.54
SYNE2-215ENST00000554997 TAAR1Q96RJ0 339 aa11.68□□□□□ -0.54
SYNE2-215ENST00000554997 NUDT12Q9BQG2 462 aa11.68□□□□□ -0.54
SYNE2-215ENST00000554997 ARHGAP39Q9C0H5 1083 aa11.68□□□□□ -0.54
SYNE2-215ENST00000554997 FOXP1Q9H334 677 aaPredicted RBP11.68□□□□□ -0.54
SYNE2-215ENST00000554997 TSKSQ9UJT2 592 aa11.68□□□□□ -0.54
SYNE2-215ENST00000554997 DIS3Q9Y2L1 958 aaKnown RBP11.68□□□□□ -0.54
SYNE2-215ENST00000554997 A0A0G2JMZ2 1700 aa11.68□□□□□ -0.54
SYNE2-215ENST00000554997 BAZ2BQ9UIF8 2168 aaKnown RBP11.67□□□□□ -0.54
SYNE2-215ENST00000554997 SPDYE3A6NKU9 549 aa11.67□□□□□ -0.54
SYNE2-215ENST00000554997 COBLO75128 1261 aa11.67□□□□□ -0.54
SYNE2-215ENST00000554997 PGK2P07205 417 aa11.67□□□□□ -0.54
SYNE2-215ENST00000554997 HOXC6P09630 235 aa11.67□□□□□ -0.54
SYNE2-215ENST00000554997 HSPA1AP0DMV8 641 aaKnown RBP11.67□□□□□ -0.54
SYNE2-215ENST00000554997 HSPA1BP0DMV9 641 aaKnown RBP11.67□□□□□ -0.54
SYNE2-215ENST00000554997 CNTN2Q02246 1040 aa11.67□□□□□ -0.54
SYNE2-215ENST00000554997 AP3B2Q13367 1082 aa11.67□□□□□ -0.54
SYNE2-215ENST00000554997 UBE2SQ16763 222 aa11.67□□□□□ -0.54
SYNE2-215ENST00000554997 ZNF792Q3KQV3 632 aa11.67□□□□□ -0.54
SYNE2-215ENST00000554997 JAKMIP3Q5VZ66 844 aa11.67□□□□□ -0.54
SYNE2-215ENST00000554997 SLC30A10Q6XR72 485 aa11.67□□□□□ -0.54
SYNE2-215ENST00000554997 FCHSD1Q86WN1 690 aa11.67□□□□□ -0.54
SYNE2-215ENST00000554997 CD99L2Q8TCZ2 262 aa11.67□□□□□ -0.54
SYNE2-215ENST00000554997 OXER1Q8TDS5 423 aa11.67□□□□□ -0.54
SYNE2-215ENST00000554997 NSUN6Q8TEA1 469 aaKnown RBP11.67□□□□□ -0.54
SYNE2-215ENST00000554997 TNFRSF25Q93038 417 aa11.67□□□□□ -0.54
SYNE2-215ENST00000554997 RMDN3Q96TC7 470 aa11.67□□□□□ -0.54
SYNE2-215ENST00000554997 TMEM260Q9NX78 707 aa11.67□□□□□ -0.54
SYNE2-215ENST00000554997 COL20A1Q9P218 1284 aa11.67□□□□□ -0.54
SYNE2-215ENST00000554997 ADD3Q9UEY8 706 aaKnown RBP11.67□□□□□ -0.54
SYNE2-215ENST00000554997 MTMR6Q9Y217 621 aa11.67□□□□□ -0.54
SYNE2-215ENST00000554997 LOC102724159A0A0B4J2E5 919 aa11.66□□□□□ -0.54
SYNE2-215ENST00000554997 SOWAHBA6NEL2 793 aa11.66□□□□□ -0.54
SYNE2-215ENST00000554997 B4DLN1 442 aa11.66□□□□□ -0.54
SYNE2-215ENST00000554997 FOXN1O15353 648 aa11.66□□□□□ -0.54
SYNE2-215ENST00000554997 ECM2O94769 699 aaPredicted RBP11.66□□□□□ -0.54
SYNE2-215ENST00000554997 XRCC5P13010 732 aaKnown RBP11.66□□□□□ -0.54
SYNE2-215ENST00000554997 RGS2P41220 211 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms