RNA–Protein interactions for RNA: ENST00000554995.1

PSEN1-211, Transcript of presenilin 1, humanhuman

TSL 2

Gene PSEN1, Length 592 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-211ENST00000554995 TESK1Q15569 626 aa7.33□□□□□ -1.24
PSEN1-211ENST00000554995 SKOR2Q2VWA4 1001 aaPredicted RBP7.33□□□□□ -1.24
PSEN1-211ENST00000554995 DDX53Q86TM3 631 aaKnown RBP7.33□□□□□ -1.24
PSEN1-211ENST00000554995 IFNL3Q8IZI9 196 aa7.33□□□□□ -1.24
PSEN1-211ENST00000554995 MFSD4AQ8N468 514 aa7.33□□□□□ -1.24
PSEN1-211ENST00000554995 ZNF655Q8N720 491 aaPredicted RBP7.33□□□□□ -1.24
PSEN1-211ENST00000554995 PI4K2BQ8TCG2 481 aa7.33□□□□□ -1.24
PSEN1-211ENST00000554995 TSR2Q969E8 191 aaKnown RBP7.33□□□□□ -1.24
PSEN1-211ENST00000554995 MTMR8Q96EF0 704 aa7.33□□□□□ -1.24
PSEN1-211ENST00000554995 TCTN2Q96GX1 697 aa7.33□□□□□ -1.24
PSEN1-211ENST00000554995 ORAI3Q9BRQ5 295 aa7.33□□□□□ -1.24
PSEN1-211ENST00000554995 GPR62Q9BZJ7 368 aa7.33□□□□□ -1.24
PSEN1-211ENST00000554995 XPO5Q9HAV4 1204 aaKnown RBP eCLIP7.33□□□□□ -1.24
PSEN1-211ENST00000554995 GPR27Q9NS67 375 aa7.33□□□□□ -1.24
PSEN1-211ENST00000554995 ARVCFO00192 962 aa7.32□□□□□ -1.24
PSEN1-211ENST00000554995 DHX15O43143 795 aaKnown RBP7.32□□□□□ -1.24
PSEN1-211ENST00000554995 MSCO60682 206 aa7.32□□□□□ -1.24
PSEN1-211ENST00000554995 GLRX3O76003 335 aaKnown RBP7.32□□□□□ -1.24
PSEN1-211ENST00000554995 SRFP11831 508 aa7.32□□□□□ -1.24
PSEN1-211ENST00000554995 PLS3P13797 630 aa7.32□□□□□ -1.24
PSEN1-211ENST00000554995 BMP8BP34820 402 aa7.32□□□□□ -1.24
PSEN1-211ENST00000554995 ADMP35318 185 aa7.32□□□□□ -1.24
PSEN1-211ENST00000554995 LTBRP36941 435 aa7.32□□□□□ -1.24
PSEN1-211ENST00000554995 ID4P47928 161 aa7.32□□□□□ -1.24
PSEN1-211ENST00000554995 SEPHS1P49903 392 aa7.32□□□□□ -1.24
PSEN1-211ENST00000554995 SCNN1BP51168 640 aa7.32□□□□□ -1.24
PSEN1-211ENST00000554995 TMPRSS15P98073 1019 aa7.32□□□□□ -1.24
PSEN1-211ENST00000554995 ITKQ08881 620 aa7.32□□□□□ -1.24
PSEN1-211ENST00000554995 NFE2Q16621 373 aaPredicted RBP7.32□□□□□ -1.24
PSEN1-211ENST00000554995 OGFOD3Q6PK18 319 aa7.32□□□□□ -1.24
PSEN1-211ENST00000554995 CLEC10AQ8IUN9 316 aa7.32□□□□□ -1.24
PSEN1-211ENST00000554995 CCDC103Q8IW40 242 aa7.32□□□□□ -1.24
PSEN1-211ENST00000554995 PUM2Q8TB72 1066 aaKnown RBP eCLIP7.32□□□□□ -1.24
PSEN1-211ENST00000554995 TBC1D32Q96NH3 1257 aa7.32□□□□□ -1.24
PSEN1-211ENST00000554995 SMAD5Q99717 465 aaKnown RBP7.32□□□□□ -1.24
PSEN1-211ENST00000554995 FAM83CQ9BQN1 747 aa7.32□□□□□ -1.24
PSEN1-211ENST00000554995 SLC12A9Q9BXP2 914 aa7.32□□□□□ -1.24
PSEN1-211ENST00000554995 CLEC1BQ9P126 229 aa7.32□□□□□ -1.24
PSEN1-211ENST00000554995 ZNF891A8MT65 544 aaPredicted RBP7.31□□□□□ -1.24
PSEN1-211ENST00000554995 CBX4O00257 560 aa7.31□□□□□ -1.24
PSEN1-211ENST00000554995 ZEB2O60315 1214 aa7.31□□□□□ -1.24
PSEN1-211ENST00000554995 VAV1P15498 845 aa7.31□□□□□ -1.24
PSEN1-211ENST00000554995 NEK2P51955 445 aa7.31□□□□□ -1.24
PSEN1-211ENST00000554995 E4F1Q66K89 784 aaPredicted RBP7.31□□□□□ -1.24
PSEN1-211ENST00000554995 ZAR1Q86SH2 424 aa7.31□□□□□ -1.24
PSEN1-211ENST00000554995 KIF18BQ86Y91 864 aa7.31□□□□□ -1.24
PSEN1-211ENST00000554995 KSR1Q8IVT5 923 aa7.31□□□□□ -1.24
PSEN1-211ENST00000554995 ZC3H7AQ8IWR0 971 aaKnown RBP7.31□□□□□ -1.24
PSEN1-211ENST00000554995 NXPE1Q8N323 547 aa7.31□□□□□ -1.24
PSEN1-211ENST00000554995 IGSF22Q8N9C0 903 aa7.31□□□□□ -1.24
PSEN1-211ENST00000554995 COG1Q8WTW3 980 aa7.31□□□□□ -1.24
PSEN1-211ENST00000554995 POLR3GLQ9BT43 218 aa7.31□□□□□ -1.24
PSEN1-211ENST00000554995 TRIM8Q9BZR9 551 aa7.31□□□□□ -1.24
PSEN1-211ENST00000554995 PUS7LQ9H0K6 701 aaKnown RBP7.31□□□□□ -1.24
PSEN1-211ENST00000554995 CCDC8Q9H0W5 538 aaPredicted RBP7.31□□□□□ -1.24
PSEN1-211ENST00000554995 DUSP15Q9H1R2 295 aaPredicted RBP7.31□□□□□ -1.24
PSEN1-211ENST00000554995 GABBR1Q9UBS5 961 aa7.31□□□□□ -1.24
PSEN1-211ENST00000554995 APOBEC2Q9Y235 224 aaKnown RBP7.31□□□□□ -1.24
PSEN1-211ENST00000554995 CCDC194A0A1B0GVG4 234 aa7.3□□□□□ -1.24
PSEN1-211ENST00000554995 GNAT3A8MTJ3 354 aa7.3□□□□□ -1.24
PSEN1-211ENST00000554995 TSPAN6O43657 245 aa7.3□□□□□ -1.24
PSEN1-211ENST00000554995 LCP1P13796 627 aa7.3□□□□□ -1.24
PSEN1-211ENST00000554995 TBX4P57082 545 aa7.3□□□□□ -1.24
PSEN1-211ENST00000554995 KCNAB2Q13303 367 aa7.3□□□□□ -1.24
PSEN1-211ENST00000554995 PPP2R5AQ15172 486 aa7.3□□□□□ -1.24
PSEN1-211ENST00000554995 CYP27C1Q4G0S4 372 aa7.3□□□□□ -1.24
PSEN1-211ENST00000554995 EEF1DP3Q658K8 133 aa7.3□□□□□ -1.24
PSEN1-211ENST00000554995 RCSD1Q6JBY9 416 aa7.3□□□□□ -1.24
PSEN1-211ENST00000554995 LBX2Q6XYB7 198 aa7.3□□□□□ -1.24
PSEN1-211ENST00000554995 DIO2Q92813 273 aa7.3□□□□□ -1.24
PSEN1-211ENST00000554995 C8orf48Q96LL4 319 aa7.3□□□□□ -1.24
PSEN1-211ENST00000554995 CRTAC1Q9NQ79 661 aa7.3□□□□□ -1.24
PSEN1-211ENST00000554995 GPATCH2Q9NW75 528 aa7.3□□□□□ -1.24
PSEN1-211ENST00000554995 COQ6Q9Y2Z9 468 aa7.3□□□□□ -1.24
PSEN1-211ENST00000554995 ARID4BQ4LE39 1312 aaPredicted RBP7.29□□□□□ -1.24
PSEN1-211ENST00000554995 SHTN1A0MZ66 631 aa7.29□□□□□ -1.24
PSEN1-211ENST00000554995 FAM155AB1AL88 458 aaPredicted RBP7.29□□□□□ -1.24
PSEN1-211ENST00000554995 C1QTNF9BB2RNN3 333 aa7.29□□□□□ -1.24
PSEN1-211ENST00000554995 M0R2C6 588 aa7.29□□□□□ -1.24
PSEN1-211ENST00000554995 ZNF205O95201 554 aa7.29□□□□□ -1.24
PSEN1-211ENST00000554995 MAP4K4O95819 1239 aaPredicted RBP7.29□□□□□ -1.24
PSEN1-211ENST00000554995 F2P00734 622 aa7.29□□□□□ -1.24
PSEN1-211ENST00000554995 CKMP06732 381 aa7.29□□□□□ -1.24
PSEN1-211ENST00000554995 GSTM1P09488 218 aa7.29□□□□□ -1.24
PSEN1-211ENST00000554995 ADCYAP1R1P41586 468 aa7.29□□□□□ -1.24
PSEN1-211ENST00000554995 RAB27AP51159 221 aa7.29□□□□□ -1.24
PSEN1-211ENST00000554995 DSG1Q02413 1049 aa7.29□□□□□ -1.24
PSEN1-211ENST00000554995 SART3Q15020 963 aaKnown RBP7.29□□□□□ -1.24
PSEN1-211ENST00000554995 LRRC41Q15345 812 aa7.29□□□□□ -1.24
PSEN1-211ENST00000554995 RTP2Q5QGT7 225 aa7.29□□□□□ -1.24
PSEN1-211ENST00000554995 WDR75Q8IWA0 830 aaKnown RBP7.29□□□□□ -1.24
PSEN1-211ENST00000554995 SHISA5Q8N114 240 aa7.29□□□□□ -1.24
PSEN1-211ENST00000554995 CNTD1Q8N815 330 aa7.29□□□□□ -1.24
PSEN1-211ENST00000554995 PCDH19Q8TAB3 1148 aa7.29□□□□□ -1.24
PSEN1-211ENST00000554995 CCDC136Q96JN2 1154 aa7.29□□□□□ -1.24
PSEN1-211ENST00000554995 ALG1Q9BT22 464 aa7.29□□□□□ -1.24
PSEN1-211ENST00000554995 GEMIN8Q9NWZ8 242 aaKnown RBP7.29□□□□□ -1.24
PSEN1-211ENST00000554995 HMX2A2RU54 273 aa7.28□□□□□ -1.24
PSEN1-211ENST00000554995 FAM170BA6NMN3 283 aa7.28□□□□□ -1.24
PSEN1-211ENST00000554995 WDR64B1ANS9 1081 aa7.28□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms