RNA–Protein interactions for RNA: ENST00000554879.5

PCNX1-209, Transcript of pecanex 1, humanhuman

TSL 1 (best)

Gene PCNX1, Length 4,431 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX1-209ENST00000554879 NBPF9Q3BBW0 867 aa18.52■□□□□ 0.56
PCNX1-209ENST00000554879 SV2BQ7L1I2 683 aa18.52■□□□□ 0.56
PCNX1-209ENST00000554879 ERMNQ8TAM6 284 aa18.52■□□□□ 0.56
PCNX1-209ENST00000554879 PCDHA12Q9UN75 941 aa18.52■□□□□ 0.56
PCNX1-209ENST00000554879 PSMA7O14818 248 aa18.52■□□□□ 0.55
PCNX1-209ENST00000554879 NT5C2P49902 561 aa18.52■□□□□ 0.55
PCNX1-209ENST00000554879 SNW1Q13573 536 aaKnown RBP18.52■□□□□ 0.55
PCNX1-209ENST00000554879 GRIPAP1Q4V328 841 aa18.52■□□□□ 0.55
PCNX1-209ENST00000554879 TCHHQ07283 1943 aa18.51■□□□□ 0.55
PCNX1-209ENST00000554879 SHMT1P34896 483 aa18.51■□□□□ 0.55
PCNX1-209ENST00000554879 GPR162Q16538 588 aa18.51■□□□□ 0.55
PCNX1-209ENST00000554879 EAPPQ56P03 285 aaPredicted RBP18.51■□□□□ 0.55
PCNX1-209ENST00000554879 SPZ1Q9BXG8 430 aa18.51■□□□□ 0.55
PCNX1-209ENST00000554879 FANCLQ9NW38 375 aa18.51■□□□□ 0.55
PCNX1-209ENST00000554879 CNOT7Q9UIV1 285 aaKnown RBP18.51■□□□□ 0.55
PCNX1-209ENST00000554879 FBXO2Q9UK22 296 aaPredicted RBP18.51■□□□□ 0.55
PCNX1-209ENST00000554879 MLKLQ8NB16 471 aa18.51■□□□□ 0.55
PCNX1-209ENST00000554879 XPO4Q9C0E2 1151 aaKnown RBP18.51■□□□□ 0.55
PCNX1-209ENST00000554879 FBXO38Q6PIJ6 1188 aa18.51■□□□□ 0.55
PCNX1-209ENST00000554879 SH3GLB2Q9NR46 395 aa18.51■□□□□ 0.55
PCNX1-209ENST00000554879 NRBP1Q9UHY1 535 aa18.51■□□□□ 0.55
PCNX1-209ENST00000554879 PCDHA6Q9UN73 950 aa18.51■□□□□ 0.55
PCNX1-209ENST00000554879 PCDHA8Q9Y5H6 950 aa18.51■□□□□ 0.55
PCNX1-209ENST00000554879 NDUFB10O96000 172 aa18.5■□□□□ 0.55
PCNX1-209ENST00000554879 PALM3A6NDB9 673 aaPredicted RBP18.5■□□□□ 0.55
PCNX1-209ENST00000554879 USP8P40818 1118 aa18.5■□□□□ 0.55
PCNX1-209ENST00000554879 ZCCHC17Q9NP64 241 aaKnown RBP18.5■□□□□ 0.55
PCNX1-209ENST00000554879 TBC1D7Q9P0N9 293 aa18.5■□□□□ 0.55
PCNX1-209ENST00000554879 VPS18Q9P253 973 aa18.5■□□□□ 0.55
PCNX1-209ENST00000554879 RRP15Q9Y3B9 282 aaKnown RBP18.5■□□□□ 0.55
PCNX1-209ENST00000554879 MYCLP12524 364 aaPredicted RBP18.5■□□□□ 0.55
PCNX1-209ENST00000554879 LONP1P36776 959 aaKnown RBP18.5■□□□□ 0.55
PCNX1-209ENST00000554879 GMPSP49915 693 aaPredicted RBP18.5■□□□□ 0.55
PCNX1-209ENST00000554879 SHROOM1Q2M3G4 852 aaPredicted RBP18.5■□□□□ 0.55
PCNX1-209ENST00000554879 SPDYE2BA6NHP3 402 aa18.5■□□□□ 0.55
PCNX1-209ENST00000554879 STXBP3O00186 592 aa18.5■□□□□ 0.55
PCNX1-209ENST00000554879 SPDYE6P0CI01 402 aa18.5■□□□□ 0.55
PCNX1-209ENST00000554879 PTPAQ15257 358 aa18.5■□□□□ 0.55
PCNX1-209ENST00000554879 GLT8D2Q9H1C3 349 aa18.5■□□□□ 0.55
PCNX1-209ENST00000554879 KLRG2A4D1S0 409 aaPredicted RBP18.49■□□□□ 0.55
PCNX1-209ENST00000554879 ENTPD3O75355 529 aa18.49■□□□□ 0.55
PCNX1-209ENST00000554879 HDLBPQ00341 1268 aaKnown RBP18.49■□□□□ 0.55
PCNX1-209ENST00000554879 CYTH3O43739 400 aa18.49■□□□□ 0.55
PCNX1-209ENST00000554879 KMT5BQ4FZB7 885 aa18.49■□□□□ 0.55
PCNX1-209ENST00000554879 NCAPGQ9BPX3 1015 aa18.49■□□□□ 0.55
PCNX1-209ENST00000554879 EIF4ENIF1Q9NRA8 985 aaKnown RBP18.49■□□□□ 0.55
PCNX1-209ENST00000554879 RGS17Q9UGC6 210 aaPredicted RBP18.49■□□□□ 0.55
PCNX1-209ENST00000554879 ASNSP08243 561 aa18.49■□□□□ 0.55
PCNX1-209ENST00000554879 LRCH2Q5VUJ6 765 aa18.49■□□□□ 0.55
PCNX1-209ENST00000554879 MYOZ2Q9NPC6 264 aa18.49■□□□□ 0.55
PCNX1-209ENST00000554879 CCPG1Q9ULG6 757 aa18.49■□□□□ 0.55
PCNX1-209ENST00000554879 TDP2O95551 362 aa18.48■□□□□ 0.55
PCNX1-209ENST00000554879 OAS2P29728 719 aaKnown RBP18.48■□□□□ 0.55
PCNX1-209ENST00000554879 ENGASEQ8NFI3 743 aa18.48■□□□□ 0.55
PCNX1-209ENST00000554879 VPS16Q9H269 839 aa18.48■□□□□ 0.55
PCNX1-209ENST00000554879 FAM198AQ9UFP1 575 aa18.48■□□□□ 0.55
PCNX1-209ENST00000554879 MAN1B1Q9UKM7 699 aa18.48■□□□□ 0.55
PCNX1-209ENST00000554879 SPEF2Q9C093 1822 aa18.48■□□□□ 0.55
PCNX1-209ENST00000554879 ECE1P42892 770 aa18.48■□□□□ 0.55
PCNX1-209ENST00000554879 CYP4A11Q02928 519 aa18.48■□□□□ 0.55
PCNX1-209ENST00000554879 DCAF15Q66K64 600 aa18.48■□□□□ 0.55
PCNX1-209ENST00000554879 JMJD4Q9H9V9 463 aa18.48■□□□□ 0.55
PCNX1-209ENST00000554879 SYNRGQ9UMZ2 1314 aa18.48■□□□□ 0.55
PCNX1-209ENST00000554879 RPAINQ86UA6 219 aa18.48■□□□□ 0.55
PCNX1-209ENST00000554879 PLCD4Q9BRC7 762 aa18.48■□□□□ 0.55
PCNX1-209ENST00000554879 HERC5Q9UII4 1024 aaKnown RBP18.48■□□□□ 0.55
PCNX1-209ENST00000554879 ACER1Q8TDN7 264 aa18.48■□□□□ 0.55
PCNX1-209ENST00000554879 FAM151AQ8WW52 585 aa18.48■□□□□ 0.55
PCNX1-209ENST00000554879 YDJCA8MPS7 323 aa18.47■□□□□ 0.55
PCNX1-209ENST00000554879 POTEDQ86YR6 584 aa18.47■□□□□ 0.55
PCNX1-209ENST00000554879 MAP3K14Q99558 947 aa18.47■□□□□ 0.55
PCNX1-209ENST00000554879 FRMD4AQ9P2Q2 1039 aaPredicted RBP18.47■□□□□ 0.55
PCNX1-209ENST00000554879 GSDMDP57764 484 aa18.47■□□□□ 0.55
PCNX1-209ENST00000554879 DCAF4Q8WV16 495 aa18.47■□□□□ 0.55
PCNX1-209ENST00000554879 PAGE5Q96GU1 130 aa18.47■□□□□ 0.55
PCNX1-209ENST00000554879 ERO1AQ96HE7 468 aa18.47■□□□□ 0.55
PCNX1-209ENST00000554879 TSG101Q99816 390 aa18.47■□□□□ 0.55
PCNX1-209ENST00000554879 RABEP2Q9H5N1 569 aa18.47■□□□□ 0.55
PCNX1-209ENST00000554879 TMOD4Q9NZQ9 345 aa18.47■□□□□ 0.55
PCNX1-209ENST00000554879 CEP83Q9Y592 693 aa18.47■□□□□ 0.55
PCNX1-209ENST00000554879 POTEMA6NI47 508 aa18.47■□□□□ 0.55
PCNX1-209ENST00000554879 NF2P35240 595 aa18.47■□□□□ 0.55
PCNX1-209ENST00000554879 SARNPP82979 210 aaKnown RBP18.47■□□□□ 0.55
PCNX1-209ENST00000554879 DNAI1Q9UI46 699 aa18.47■□□□□ 0.55
PCNX1-209ENST00000554879 MORC2Q9Y6X9 1032 aaPredicted RBP18.47■□□□□ 0.55
PCNX1-209ENST00000554879 ATP1A3P13637 1013 aa18.46■□□□□ 0.55
PCNX1-209ENST00000554879 ACBD3Q9H3P7 528 aa18.46■□□□□ 0.55
PCNX1-209ENST00000554879 SPON1Q9HCB6 807 aa18.46■□□□□ 0.55
PCNX1-209ENST00000554879 TBCAO75347 108 aaKnown RBP18.46■□□□□ 0.55
PCNX1-209ENST00000554879 ENOX2Q16206 610 aaKnown RBP18.46■□□□□ 0.55
PCNX1-209ENST00000554879 TYW1BQ6NUM6 668 aa18.46■□□□□ 0.55
PCNX1-209ENST00000554879 METTL16Q86W50 562 aaKnown RBP18.46■□□□□ 0.55
PCNX1-209ENST00000554879 SULF1Q8IWU6 871 aa18.46■□□□□ 0.55
PCNX1-209ENST00000554879 GJA10Q969M2 543 aa18.46■□□□□ 0.55
PCNX1-209ENST00000554879 TMEM60Q9H2L4 133 aa18.46■□□□□ 0.55
PCNX1-209ENST00000554879 GCOM1H8Y6P7 765 aaPredicted RBP18.46■□□□□ 0.55
PCNX1-209ENST00000554879 POLR2MP0CAP2 368 aa18.46■□□□□ 0.55
PCNX1-209ENST00000554879 TGFB2P61812 414 aa18.46■□□□□ 0.55
PCNX1-209ENST00000554879 ATP2C1P98194 919 aaPredicted RBP18.46■□□□□ 0.55
PCNX1-209ENST00000554879 SPP2Q13103 211 aa18.46■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms