RNA–Protein interactions for RNA: ENST00000554873.5

SYNE3-203, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

TSL 5 BASIC

Gene SYNE3, Length 2,826 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-203ENST00000554873 GTF3C5Q9Y5Q8 519 aaPredicted RBP17.35■□□□□ 0.37
SYNE3-203ENST00000554873 FAM205CA6NFA0 338 aa17.35■□□□□ 0.37
SYNE3-203ENST00000554873 AHCYL1O43865 530 aa17.35■□□□□ 0.37
SYNE3-203ENST00000554873 FESP07332 822 aa17.35■□□□□ 0.37
SYNE3-203ENST00000554873 TNFRSF8P28908 595 aa17.35■□□□□ 0.37
SYNE3-203ENST00000554873 CASP1P29466 404 aa17.35■□□□□ 0.37
SYNE3-203ENST00000554873 AFMP43652 599 aa17.35■□□□□ 0.37
SYNE3-203ENST00000554873 ELF3P78545 371 aaPredicted RBP17.35■□□□□ 0.37
SYNE3-203ENST00000554873 GLE1Q53GS7 698 aaKnown RBP17.35■□□□□ 0.37
SYNE3-203ENST00000554873 KLHL10Q6JEL2 608 aa17.35■□□□□ 0.37
SYNE3-203ENST00000554873 ZNF662Q6ZS27 426 aa17.35■□□□□ 0.37
SYNE3-203ENST00000554873 NUP58Q9BVL2 599 aa17.35■□□□□ 0.37
SYNE3-203ENST00000554873 SLC4A4Q9Y6R1 1079 aa17.35■□□□□ 0.37
SYNE3-203ENST00000554873 CLSTN1O94985 981 aa17.34■□□□□ 0.37
SYNE3-203ENST00000554873 EZH2Q15910 746 aaKnown RBP17.34■□□□□ 0.37
SYNE3-203ENST00000554873 CFAP58Q5T655 872 aa17.34■□□□□ 0.37
SYNE3-203ENST00000554873 MSL1Q68DK7 614 aa17.34■□□□□ 0.37
SYNE3-203ENST00000554873 CD302Q8IX05 232 aa17.34■□□□□ 0.37
SYNE3-203ENST00000554873 IQCKQ8N0W5 287 aa17.34■□□□□ 0.37
SYNE3-203ENST00000554873 TRIM58Q8NG06 486 aa17.34■□□□□ 0.37
SYNE3-203ENST00000554873 ACSBG1Q96GR2 724 aa17.34■□□□□ 0.37
SYNE3-203ENST00000554873 BAIAP2L1Q9UHR4 511 aa17.34■□□□□ 0.37
SYNE3-203ENST00000554873 SYNRGQ9UMZ2 1314 aa17.34■□□□□ 0.37
SYNE3-203ENST00000554873 COL5A2P05997 1499 aaPredicted RBP17.34■□□□□ 0.37
SYNE3-203ENST00000554873 CHD4Q14839 1912 aa17.34■□□□□ 0.37
SYNE3-203ENST00000554873 PSMD2Q13200 908 aa17.34■□□□□ 0.37
SYNE3-203ENST00000554873 ZNF654Q8IZM8 581 aa17.34■□□□□ 0.37
SYNE3-203ENST00000554873 CCHCR1Q8TD31 782 aa17.34■□□□□ 0.37
SYNE3-203ENST00000554873 OSBPL9Q96SU4 736 aa17.34■□□□□ 0.37
SYNE3-203ENST00000554873 DCCP43146 1447 aa17.34■□□□□ 0.37
SYNE3-203ENST00000554873 ZNF233A6NK53 670 aa17.34■□□□□ 0.37
SYNE3-203ENST00000554873 LIN7AO14910 233 aaPredicted RBP17.34■□□□□ 0.37
SYNE3-203ENST00000554873 GHRP10912 638 aa17.34■□□□□ 0.37
SYNE3-203ENST00000554873 KRT9P35527 623 aa17.34■□□□□ 0.37
SYNE3-203ENST00000554873 CUL4BQ13620 913 aa17.34■□□□□ 0.37
SYNE3-203ENST00000554873 THEMIS2Q5TEJ8 643 aa17.34■□□□□ 0.37
SYNE3-203ENST00000554873 ZNF572Q7Z3I7 529 aaPredicted RBP17.34■□□□□ 0.37
SYNE3-203ENST00000554873 TMTC2Q8N394 836 aa17.34■□□□□ 0.37
SYNE3-203ENST00000554873 CHP1Q99653 195 aa17.34■□□□□ 0.37
SYNE3-203ENST00000554873 TMX4Q9H1E5 349 aaPredicted RBP17.34■□□□□ 0.37
SYNE3-203ENST00000554873 AATFQ9NY61 560 aaKnown RBP eCLIP17.34■□□□□ 0.37
SYNE3-203ENST00000554873 GMNCA6NCL1 334 aa17.33■□□□□ 0.36
SYNE3-203ENST00000554873 HMGB1P1B2RPK0 211 aaPredicted RBP17.33■□□□□ 0.36
SYNE3-203ENST00000554873 RNF225M0QZC1 329 aaPredicted RBP17.33■□□□□ 0.36
SYNE3-203ENST00000554873 TBC1D25Q3MII6 688 aa17.33■□□□□ 0.36
SYNE3-203ENST00000554873 EARS2Q5JPH6 523 aaKnown RBP17.33■□□□□ 0.36
SYNE3-203ENST00000554873 CCDC181Q5TID7 509 aa17.33■□□□□ 0.36
SYNE3-203ENST00000554873 FNBP4Q8N3X1 1017 aaPredicted RBP17.33■□□□□ 0.36
SYNE3-203ENST00000554873 PAGE5Q96GU1 130 aa17.33■□□□□ 0.36
SYNE3-203ENST00000554873 ATP6V1G3Q96LB4 118 aa17.33■□□□□ 0.36
SYNE3-203ENST00000554873 NACAP1Q9BZK3 213 aa17.33■□□□□ 0.36
SYNE3-203ENST00000554873 PPANQ9NQ55 473 aaKnown RBP17.33■□□□□ 0.36
SYNE3-203ENST00000554873 RPS6KL1Q9Y6S9 549 aa17.33■□□□□ 0.36
SYNE3-203ENST00000554873 MROH5Q6ZUA9 1318 aa17.33■□□□□ 0.36
SYNE3-203ENST00000554873 KRT86O43790 486 aa17.33■□□□□ 0.36
SYNE3-203ENST00000554873 SH3RF1Q7Z6J0 888 aa17.33■□□□□ 0.36
SYNE3-203ENST00000554873 ARFGAP2Q8N6H7 521 aa17.33■□□□□ 0.36
SYNE3-203ENST00000554873 JADE2Q9NQC1 790 aa17.33■□□□□ 0.36
SYNE3-203ENST00000554873 STIM2Q9P246 746 aa17.33■□□□□ 0.36
SYNE3-203ENST00000554873 WDR3Q9UNX4 943 aaKnown RBP eCLIP17.33■□□□□ 0.36
SYNE3-203ENST00000554873 TRIM75PA6NK02 468 aa17.32■□□□□ 0.36
SYNE3-203ENST00000554873 SLC5A1P13866 664 aa17.32■□□□□ 0.36
SYNE3-203ENST00000554873 HERVK_113P62684 666 aa17.32■□□□□ 0.36
SYNE3-203ENST00000554873 ITGB3BPQ13352 177 aaPredicted RBP17.32■□□□□ 0.36
SYNE3-203ENST00000554873 SMYD4Q8IYR2 804 aaPredicted RBP17.32■□□□□ 0.36
SYNE3-203ENST00000554873 RTN3O95197 1032 aaPredicted RBP17.32■□□□□ 0.36
SYNE3-203ENST00000554873 ANP32DO95626 131 aa17.32■□□□□ 0.36
SYNE3-203ENST00000554873 IDEP14735 1019 aa17.32■□□□□ 0.36
SYNE3-203ENST00000554873 CDC25AP30304 524 aa17.32■□□□□ 0.36
SYNE3-203ENST00000554873 RIPK1Q13546 671 aa17.32■□□□□ 0.36
SYNE3-203ENST00000554873 RPUSD2Q8IZ73 545 aaKnown RBP17.32■□□□□ 0.36
SYNE3-203ENST00000554873 MIGA1Q8NAN2 632 aa17.32■□□□□ 0.36
SYNE3-203ENST00000554873 CCDC43Q96MW1 224 aaKnown RBP17.32■□□□□ 0.36
SYNE3-203ENST00000554873 VPS54Q9P1Q0 977 aa17.32■□□□□ 0.36
SYNE3-203ENST00000554873 MYH3P11055 1940 aa17.32■□□□□ 0.36
SYNE3-203ENST00000554873 SHANK3Q9BYB0 1731 aa17.32■□□□□ 0.36
SYNE3-203ENST00000554873 NEFHP12036 1026 aa17.31■□□□□ 0.36
SYNE3-203ENST00000554873 GNAT2P19087 354 aa17.31■□□□□ 0.36
SYNE3-203ENST00000554873 KRT83P78385 493 aa17.31■□□□□ 0.36
SYNE3-203ENST00000554873 SLC30A9Q6PML9 568 aa17.31■□□□□ 0.36
SYNE3-203ENST00000554873 HVCN1Q96D96 273 aa17.31■□□□□ 0.36
SYNE3-203ENST00000554873 SEC16BQ96JE7 1060 aa17.31■□□□□ 0.36
SYNE3-203ENST00000554873 SLC4A9Q96Q91 983 aa17.31■□□□□ 0.36
SYNE3-203ENST00000554873 YIPF3Q9GZM5 350 aa17.31■□□□□ 0.36
SYNE3-203ENST00000554873 KDM4CQ9H3R0 1056 aa17.31■□□□□ 0.36
SYNE3-203ENST00000554873 LEMD3Q9Y2U8 911 aa17.31■□□□□ 0.36
SYNE3-203ENST00000554873 PPP1R3GB7ZBB8 358 aa17.31■□□□□ 0.36
SYNE3-203ENST00000554873 VAV2P52735 878 aa17.31■□□□□ 0.36
SYNE3-203ENST00000554873 PKN1Q16512 942 aa17.31■□□□□ 0.36
SYNE3-203ENST00000554873 ARMC9Q7Z3E5 817 aa17.31■□□□□ 0.36
SYNE3-203ENST00000554873 CREG2Q8IUH2 290 aa17.31■□□□□ 0.36
SYNE3-203ENST00000554873 MFN1Q8IWA4 741 aa17.31■□□□□ 0.36
SYNE3-203ENST00000554873 CACNA2D3Q8IZS8 1091 aa17.31■□□□□ 0.36
SYNE3-203ENST00000554873 KLHL23Q8NBE8 558 aa17.31■□□□□ 0.36
SYNE3-203ENST00000554873 SYMPKQ92797 1274 aaKnown RBP17.31■□□□□ 0.36
SYNE3-203ENST00000554873 MTA3Q9BTC8 594 aa17.31■□□□□ 0.36
SYNE3-203ENST00000554873 PNPLA7Q6ZV29 1317 aa17.31■□□□□ 0.36
SYNE3-203ENST00000554873 TOGARAM1Q9Y4F4 1720 aa17.31■□□□□ 0.36
SYNE3-203ENST00000554873 hCG_1642624A0A1W2PR95 340 aa17.3■□□□□ 0.36
SYNE3-203ENST00000554873 SMIM22K7EJ46 135 aa17.3■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms