RNA–Protein interactions for RNA: ENST00000554811.5

XRCC3-208, Transcript of X-ray repair cross complementing 3, humanhuman

TSL 2

Gene XRCC3, Length 3,668 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-208ENST00000554811 HAUS4Q9H6D7 363 aa13.2□□□□□ -0.3
XRCC3-208ENST00000554811 KCND1Q9NSA2 647 aa13.2□□□□□ -0.3
XRCC3-208ENST00000554811 LIMA1Q9UHB6 759 aaKnown RBP13.2□□□□□ -0.3
XRCC3-208ENST00000554811 MYH8P13535 1937 aa13.2□□□□□ -0.3
XRCC3-208ENST00000554811 TRIM14Q14142 442 aa13.19□□□□□ -0.3
XRCC3-208ENST00000554811 NPY5RQ15761 445 aa13.19□□□□□ -0.3
XRCC3-208ENST00000554811 KCTD1Q719H9 257 aa13.19□□□□□ -0.3
XRCC3-208ENST00000554811 NEK8Q86SG6 692 aa13.19□□□□□ -0.3
XRCC3-208ENST00000554811 GLIS3Q8NEA6 775 aa13.19□□□□□ -0.3
XRCC3-208ENST00000554811 AFAP1L1Q8TED9 768 aa13.19□□□□□ -0.3
XRCC3-208ENST00000554811 PYM1Q9BRP8 204 aaKnown RBP13.19□□□□□ -0.3
XRCC3-208ENST00000554811 CYTH3O43739 400 aa13.19□□□□□ -0.3
XRCC3-208ENST00000554811 CACNB3P54284 484 aa13.19□□□□□ -0.3
XRCC3-208ENST00000554811 GTF2IP78347 998 aa13.19□□□□□ -0.3
XRCC3-208ENST00000554811 DCAF17Q5H9S7 520 aaPredicted RBP13.19□□□□□ -0.3
XRCC3-208ENST00000554811 CEP95Q96GE4 821 aa13.19□□□□□ -0.3
XRCC3-208ENST00000554811 BICDL2A1A5D9 508 aa13.19□□□□□ -0.3
XRCC3-208ENST00000554811 ARHGAP25P42331 645 aa13.19□□□□□ -0.3
XRCC3-208ENST00000554811 GFPT1Q06210 699 aaPredicted RBP13.19□□□□□ -0.3
XRCC3-208ENST00000554811 E2F4Q16254 413 aa13.19□□□□□ -0.3
XRCC3-208ENST00000554811 RCSD1Q6JBY9 416 aa13.19□□□□□ -0.3
XRCC3-208ENST00000554811 DPP8Q6V1X1 898 aaPredicted RBP13.19□□□□□ -0.3
XRCC3-208ENST00000554811 FAM114A1Q8IWE2 563 aa13.19□□□□□ -0.3
XRCC3-208ENST00000554811 MS4A14Q96JA4 679 aa13.19□□□□□ -0.3
XRCC3-208ENST00000554811 ALS2CR12Q96Q35 445 aa13.19□□□□□ -0.3
XRCC3-208ENST00000554811 GOLPH3Q9H4A6 298 aa13.19□□□□□ -0.3
XRCC3-208ENST00000554811 SIPA1L3O60292 1781 aaPredicted RBP13.19□□□□□ -0.3
XRCC3-208ENST00000554811 GNA11P29992 359 aa13.18□□□□□ -0.3
XRCC3-208ENST00000554811 HERVK_113P62684 666 aa13.18□□□□□ -0.3
XRCC3-208ENST00000554811 PRPF4BQ13523 1007 aaKnown RBP13.18□□□□□ -0.3
XRCC3-208ENST00000554811 SH3RF1Q7Z6J0 888 aa13.18□□□□□ -0.3
XRCC3-208ENST00000554811 BMP2KQ9NSY1 1161 aaPredicted RBP13.18□□□□□ -0.3
XRCC3-208ENST00000554811 GOLGA6BA6NDN3 693 aa13.18□□□□□ -0.3
XRCC3-208ENST00000554811 MEIS1O00470 390 aa13.18□□□□□ -0.3
XRCC3-208ENST00000554811 GGCXP38435 758 aa13.18□□□□□ -0.3
XRCC3-208ENST00000554811 POLR2FP61218 127 aaKnown RBP13.18□□□□□ -0.3
XRCC3-208ENST00000554811 CKAP4Q07065 602 aaKnown RBP13.18□□□□□ -0.3
XRCC3-208ENST00000554811 PLS1Q14651 629 aa13.18□□□□□ -0.3
XRCC3-208ENST00000554811 HERC4Q5GLZ8 1057 aaPredicted RBP13.18□□□□□ -0.3
XRCC3-208ENST00000554811 MAATS1Q7Z4T9 603 aa13.18□□□□□ -0.3
XRCC3-208ENST00000554811 CNBD1Q8NA66 436 aa13.18□□□□□ -0.3
XRCC3-208ENST00000554811 TSG101Q99816 390 aa13.18□□□□□ -0.3
XRCC3-208ENST00000554811 ANKRD2Q9GZV1 360 aa13.18□□□□□ -0.3
XRCC3-208ENST00000554811 REXO2Q9Y3B8 237 aaKnown RBP13.18□□□□□ -0.3
XRCC3-208ENST00000554811 USH1GQ495M9 461 aa13.18□□□□□ -0.3
XRCC3-208ENST00000554811 COG1Q8WTW3 980 aa13.18□□□□□ -0.3
XRCC3-208ENST00000554811 HDAC7Q8WUI4 952 aa13.18□□□□□ -0.3
XRCC3-208ENST00000554811 MXD3Q9BW11 206 aa13.18□□□□□ -0.3
XRCC3-208ENST00000554811 TNS2Q63HR2 1409 aa13.17□□□□□ -0.3
XRCC3-208ENST00000554811 UBAP1LF5GYI3 381 aa13.17□□□□□ -0.3
XRCC3-208ENST00000554811 ATP2C2O75185 946 aa13.17□□□□□ -0.3
XRCC3-208ENST00000554811 ACTN2P35609 894 aa13.17□□□□□ -0.3
XRCC3-208ENST00000554811 CDK8P49336 464 aa13.17□□□□□ -0.3
XRCC3-208ENST00000554811 NAALADL2Q58DX5 795 aa13.17□□□□□ -0.3
XRCC3-208ENST00000554811 ZNF804AQ7Z570 1209 aa13.17□□□□□ -0.3
XRCC3-208ENST00000554811 ADAT2Q7Z6V5 191 aaKnown RBP13.17□□□□□ -0.3
XRCC3-208ENST00000554811 IRF2BP1Q8IU81 584 aa13.17□□□□□ -0.3
XRCC3-208ENST00000554811 TRIM9Q9C026 710 aa13.17□□□□□ -0.3
XRCC3-208ENST00000554811 SAMM50Q9Y512 469 aa13.17□□□□□ -0.3
XRCC3-208ENST00000554811 NPHP3-ACAD11A0A0J9YXS1 232 aa13.17□□□□□ -0.3
XRCC3-208ENST00000554811 GOLGA6CA6NDK9 693 aa13.17□□□□□ -0.3
XRCC3-208ENST00000554811 LRRC53A6NM62 1247 aa13.17□□□□□ -0.3
XRCC3-208ENST00000554811 GOLGA6DP0CG33 693 aa13.17□□□□□ -0.3
XRCC3-208ENST00000554811 HPDP32754 393 aaPredicted RBP13.17□□□□□ -0.3
XRCC3-208ENST00000554811 TRAPPC10P48553 1259 aa13.17□□□□□ -0.3
XRCC3-208ENST00000554811 CYP4A11Q02928 519 aa13.17□□□□□ -0.3
XRCC3-208ENST00000554811 DOK7Q18PE1 504 aa13.17□□□□□ -0.3
XRCC3-208ENST00000554811 CNNM4Q6P4Q7 775 aa13.17□□□□□ -0.3
XRCC3-208ENST00000554811 SPATA20Q8TB22 786 aa13.17□□□□□ -0.3
XRCC3-208ENST00000554811 TRIM31Q9BZY9 425 aa13.17□□□□□ -0.3
XRCC3-208ENST00000554811 GOLGA6AQ9NYA3 693 aa13.17□□□□□ -0.3
XRCC3-208ENST00000554811 RRP15Q9Y3B9 282 aaKnown RBP13.17□□□□□ -0.3
XRCC3-208ENST00000554811 CAPN6Q9Y6Q1 641 aa13.17□□□□□ -0.3
XRCC3-208ENST00000554811 H0YHG0 523 aa13.17□□□□□ -0.3
XRCC3-208ENST00000554811 EPHB6O15197 1021 aa13.17□□□□□ -0.3
XRCC3-208ENST00000554811 LDHCP07864 332 aa13.17□□□□□ -0.3
XRCC3-208ENST00000554811 TAL1P17542 331 aaPredicted RBP13.17□□□□□ -0.3
XRCC3-208ENST00000554811 CCNE1P24864 410 aa13.17□□□□□ -0.3
XRCC3-208ENST00000554811 KIF11P52732 1056 aa13.17□□□□□ -0.3
XRCC3-208ENST00000554811 C12orf60Q5U649 245 aa13.17□□□□□ -0.3
XRCC3-208ENST00000554811 EHBP1Q8NDI1 1231 aa13.17□□□□□ -0.3
XRCC3-208ENST00000554811 SPAG5Q96R06 1193 aa13.17□□□□□ -0.3
XRCC3-208ENST00000554811 RASSF4Q9H2L5 321 aa13.17□□□□□ -0.3
XRCC3-208ENST00000554811 BCS1LQ9Y276 419 aa13.17□□□□□ -0.3
XRCC3-208ENST00000554811 ATRNO75882 1429 aa13.16□□□□□ -0.3
XRCC3-208ENST00000554811 MYO1CO00159 1063 aa13.16□□□□□ -0.3
XRCC3-208ENST00000554811 EEF1GP26641 437 aaKnown RBP13.16□□□□□ -0.3
XRCC3-208ENST00000554811 EHHADHQ08426 723 aa13.16□□□□□ -0.3
XRCC3-208ENST00000554811 LLGL1Q15334 1064 aa13.16□□□□□ -0.3
XRCC3-208ENST00000554811 TTBK2Q6IQ55 1244 aa13.16□□□□□ -0.3
XRCC3-208ENST00000554811 C8orf74Q6P047 294 aa13.16□□□□□ -0.3
XRCC3-208ENST00000554811 MICALL1Q8N3F8 863 aa13.16□□□□□ -0.3
XRCC3-208ENST00000554811 LSM14BQ9BX40 385 aaKnown RBP13.16□□□□□ -0.3
XRCC3-208ENST00000554811 TSPYL1Q9H0U9 437 aa13.16□□□□□ -0.3
XRCC3-208ENST00000554811 EHD4Q9H223 541 aa13.16□□□□□ -0.3
XRCC3-208ENST00000554811 ZNF287Q9HBT7 754 aa13.16□□□□□ -0.3
XRCC3-208ENST00000554811 MAD2L2Q9UI95 211 aa13.16□□□□□ -0.3
XRCC3-208ENST00000554811 L1RE1Q9UN81 338 aa13.16□□□□□ -0.3
XRCC3-208ENST00000554811 MYBL2P10244 700 aa13.16□□□□□ -0.3
XRCC3-208ENST00000554811 TBC1D10BQ4KMP7 808 aaPredicted RBP13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms